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MT430910.1__QKE60408.1__X__00023
Bact-VirMT430910.1__QKE60408.1__X__00023
Identity
- Accession:
- MT430910 ↗
- Kingdom:
- phage
Quality
71.4
mean pLDDT
Taxonomy
TaxID: 2736364
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-57
Domain cluster:
representative
CATH (31)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ea0A02 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.72 | 63.0 | 3.83e-01 | 100.0% | 69.6% |
| 2zxyA00 | 1.10.760.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain | 0.68 | 49.0 | 4.29e-01 | 78.2% | 93.0% |
| 1x2nA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.68 | 53.0 | 5.20e-01 | 89.1% | 80.0% |
| 1akhB00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.66 | 52.0 | 4.68e-01 | 89.1% | 61.5% |
| 2kpqA01 | 6.10.250.730 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.65 | 41.0 | 3.72e-01 | 72.7% | 48.6% |
| 2wzkA02 | 1.20.1310.10 | Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats | 0.63 | 54.0 | 4.21e-01 | 100.0% | 90.6% |
| 2iw3A02 | 1.20.1390.20 | Mainly Alpha › Up-down Bundle › PWI domain › | 0.63 | 51.0 | 4.46e-01 | 94.5% | 63.3% |
| 1wueB01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.62 | 48.0 | 3.53e-01 | 85.5% | 77.9% |
| 6tmfT00 | 1.10.60.20 | Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 › Ribosomal protein S17 | 0.62 | 49.0 | 4.70e-01 | 89.1% | 78.1% |
| 3h20A04 | 1.10.1240.50 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › | 0.61 | 50.0 | 4.43e-01 | 100.0% | 85.4% |
| 1moqA01 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.61 | 50.0 | 3.35e-01 | 90.9% | 71.6% |
| 3hwrA02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.60 | 51.0 | 3.94e-01 | 100.0% | 92.2% |
| 1te2A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.59 | 48.0 | 4.41e-01 | 90.9% | 81.9% |
| 1t3qA02 | 1.10.150.120 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › [2Fe-2S]-binding domain | 0.59 | 46.0 | 4.19e-01 | 94.5% | 63.0% |
| 1z19A01 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.58 | 48.0 | 3.97e-01 | 92.7% | 52.0% |
| 2es9A00 | 1.20.1290.30 | Mainly Alpha › Up-down Bundle › AhpD-like › | 0.58 | 48.0 | 4.04e-01 | 96.4% | 72.0% |
| 3f5cB00 | 1.10.565.10 | Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor | 0.57 | 47.0 | 3.35e-01 | 94.5% | 35.5% |
| 3u4qA06 | 3.90.320.10 | Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › | 0.55 | 44.0 | 3.00e-01 | 89.1% | 22.7% |
| 3s63A00 | 1.10.225.10 | Mainly Alpha › Orthogonal Bundle › NK-Lysin › Saposin-like | 0.55 | 43.0 | 3.81e-01 | 90.9% | 65.9% |
| 1ls1A01 | 1.20.120.140 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain | 0.55 | 46.0 | 4.02e-01 | 98.2% | 69.7% |
| 4nsmA00 | 6.10.250.2770 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.55 | 39.0 | 3.62e-01 | 76.4% | 81.7% |
| 6i2mB02 | 1.20.1310.10 | Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats | 0.55 | 41.0 | 3.28e-01 | 83.6% | 63.1% |
| 8gccA03 | 1.10.268.10 | Mainly Alpha › Orthogonal Bundle › Topoisomerase; domain 3 › Topoisomerase, domain 3 | 0.54 | 40.0 | 3.33e-01 | 81.8% | 49.0% |
| 2oktA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.54 | 41.0 | 3.19e-01 | 85.5% | 87.5% |
| 5ywwA01 | 3.40.50.1010 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 5'-nuclease | 0.53 | 42.0 | 3.51e-01 | 98.2% | 53.9% |
| 2odvA01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.52 | 44.0 | 3.65e-01 | 100.0% | 85.7% |
| 3dfgA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 36.0 | 3.74e-01 | 76.4% | 85.4% |
| 2mqaA00 | 1.10.274.60 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Spidroin, repetitive domain | 0.52 | 42.0 | 3.31e-01 | 92.7% | 55.2% |
| 4ol8B03 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.51 | 45.0 | 3.81e-01 | 98.2% | 63.3% |
| 1hciA01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.51 | 40.0 | 3.32e-01 | 100.0% | 80.2% |
| 2n1rA00 | 1.10.150.90 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Immunodeficiency lentiviruses, gag gene matrix protein p17 | 0.51 | 43.0 | 3.32e-01 | 100.0% | 40.3% |
ECOD (40)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3599437 | 168.1.1.1 ↗ | alpha arrays › Sec7 domain › Sec7 domain › Sec7 domain › Sec7 | 0.69 | 60.0 | 3.98e-01 | 100.0% | 31.6% |
| 3327057 | 101.1.1.298 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › DUF7645 | 0.68 | 52.0 | 5.14e-01 | 90.9% | 78.3% |
| 3261482 | 3939.1.1.0 ↗ | alpha duplicates or obligate multimers › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain | 0.67 | 54.0 | 4.88e-01 | 89.1% | 66.7% |
| 4577554 | 101.11.1.1 ↗ | alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › PNPase | 0.66 | 52.0 | 4.41e-01 | 89.1% | 66.3% |
| 3844868 | 6088.1.1.2 ↗ | alpha arrays › Helical bundle domain in elongation factor 3A › Helical bundle domain in elongation factor 3A › Helical bundle domain in elongation factor 3A › PF26051 | 0.65 | 50.0 | 4.53e-01 | 83.6% | 90.7% |
| 3773680 | 101.1.1.123 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › MCRS_N | 0.65 | 49.0 | 4.05e-01 | 81.8% | 51.0% |
| 3382040 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.65 | 52.0 | 4.09e-01 | 92.7% | 43.6% |
| 4950862 | 518.1.1.1 ↗ | alpha arrays › Chemotaxis receptor methyltransferase CheR, N-terminal domain › Chemotaxis receptor methyltransferase CheR, N-terminal domain › Chemotaxis receptor methyltransferase CheR, N-terminal domain › CheR_N | 0.65 | 39.0 | 3.75e-01 | 94.5% | 52.3% |
| 3598778 | 198.1.1.0 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like | 0.64 | 51.0 | 4.77e-01 | 89.1% | 84.3% |
| 3967708 | 179.1.1.1 ↗ | alpha bundles › CO dehydrogenase ISP C-domain like › CO dehydrogenase ISP C-domain like › CO dehydrogenase ISP C-domain like › Fer2_2 | 0.64 | 53.0 | 4.53e-01 | 94.5% | 63.3% |
| 5012836 | 247.1.1.1 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B | 0.63 | 53.0 | 3.45e-01 | 100.0% | 33.8% |
| 3297063 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.62 | 47.0 | 3.90e-01 | 83.6% | 54.0% |
| 4984393 | 179.1.1.1 ↗ | alpha bundles › CO dehydrogenase ISP C-domain like › CO dehydrogenase ISP C-domain like › CO dehydrogenase ISP C-domain like › Fer2_2 | 0.62 | 49.0 | 4.48e-01 | 90.9% | 65.3% |
| 4107520 | 198.1.1.0 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like | 0.61 | 49.0 | 4.49e-01 | 92.7% | 77.3% |
| 3866299 | 101.1.1.123 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › MCRS_N | 0.61 | 47.0 | 4.62e-01 | 87.3% | 83.3% |
| 4022499 | 168.1.1.1 ↗ | alpha arrays › Sec7 domain › Sec7 domain › Sec7 domain › Sec7 | 0.61 | 48.0 | 3.44e-01 | 89.1% | 34.3% |
| 3509166 | 101.1.1.244 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_TIMELESS | 0.60 | 42.0 | 3.95e-01 | 74.5% | 81.4% |
| 4115902 | 101.35.1.4 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH3 | 0.60 | 44.0 | 4.50e-01 | 87.3% | 85.5% |
| 4381449 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.60 | 45.0 | 4.27e-01 | 87.3% | 82.9% |
| 5074957 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.59 | 40.0 | 3.71e-01 | 74.5% | 55.7% |
| 5024612 | 1075.3.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC importer transmembrane domain fold › Type I ABC importer transmembrane domain fold › BPD_transp_1 | 0.59 | 41.0 | 2.68e-01 | 74.5% | 16.7% |
| 5080406 | 101.1.17.1 ↗ | alpha arrays › HTH › HTH › FF domain › Ribosomal_S17e | 0.59 | 46.0 | 4.55e-01 | 87.3% | 86.4% |
| 3234027 | 101.1.1.75 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_48 | 0.58 | 43.0 | 4.22e-01 | 83.6% | 81.7% |
| 3675688 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.58 | 43.0 | 4.14e-01 | 81.8% | 72.3% |
| 4997192 | 2006.1.1.18 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 | 0.57 | 46.0 | 3.05e-01 | 90.9% | 32.5% |
| 5040755 | 101.1.1.251 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_ParB | 0.57 | 43.0 | 3.50e-01 | 81.8% | 48.6% |
| 4361091 | 101.35.1.4 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH3 | 0.57 | 41.0 | 4.06e-01 | 81.8% | 75.0% |
| 1323419 | 316.1.1.34 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › DncV-like_NTFase | 0.56 | 43.0 | 2.97e-01 | 92.7% | 20.6% |
| 4489939 | 101.35.1.4 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH3 | 0.56 | 42.0 | 4.19e-01 | 85.5% | 83.3% |
| 4484804 | 628.1.1.1 ↗ | alpha bundles › Fatty acid responsive transcription factor FadR, C-terminal domain › Fatty acid responsive transcription factor FadR, C-terminal domain › Fatty acid responsive transcription factor FadR, C-terminal domain › FCD | 0.56 | 43.0 | 3.28e-01 | 87.3% | 69.0% |
| 3260127 | 2003.1.1.143 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NmrA, NAD_binding_10 | 0.56 | 43.0 | 2.74e-01 | 89.1% | 36.3% |
| 3596370 | 4030.1.1.0 ↗ | alpha bundles › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz | 0.55 | 45.0 | 3.62e-01 | 100.0% | 76.8% |
| 3896888 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.54 | 45.0 | 3.66e-01 | 100.0% | 77.6% |
| 3220510 | 101.1.1.75 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_48 | 0.54 | 40.0 | 4.16e-01 | 87.3% | 94.0% |
| 3212366 | 101.1.1.75 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_48 | 0.53 | 38.0 | 3.96e-01 | 83.6% | 92.0% |
| 3398240 | 109.4.1.2419 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF28893 | 0.53 | 41.0 | 2.90e-01 | 92.7% | 24.3% |
| 5021354 | 101.1.2.619 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_33 | 0.53 | 41.0 | 3.92e-01 | 87.3% | 72.3% |
| 5074884 | 2002.1.1.63 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_35 | 0.53 | 45.0 | 2.56e-01 | 100.0% | 31.0% |
| 4482310 | 101.35.1.4 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH3 | 0.51 | 37.0 | 3.72e-01 | 85.5% | 81.8% |
| 4105244 | 101.35.1.4 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH3 | 0.51 | 38.0 | 3.76e-01 | 87.3% | 81.7% |