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MT451983.1__QKN87704.1__IXEL_3__00003
Bact-VirMT451983.1__QKN87704.1__IXEL_3__00003
Identity
- Accession:
- MT451983 ↗
- Kingdom:
- phage
Quality
89.2
mean pLDDT
Taxonomy
TaxID: 2736269
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-44
Domain cluster:
representative
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3m1cA04 | 2.60.40.3190 | Mainly Beta › Sandwich › Immunoglobulin-like › Herpesvirus glycoprotein H, C-terminal domain | 0.70 | 57.0 | 4.15e-01 | 100.0% | 45.5% |
| 3f1sB02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.68 | 57.0 | 4.54e-01 | 100.0% | 54.8% |
| 1qppA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.61 | 50.0 | 3.79e-01 | 100.0% | 63.2% |
| 4wiwA02 | 3.10.50.10 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.60 | 45.0 | 3.90e-01 | 85.7% | 100.0% |
| 3cz8A02 | 3.10.50.10 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.59 | 41.0 | 3.86e-01 | 78.6% | 100.0% |
| 4gi3C00 | 3.30.60.30 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.59 | 43.0 | 4.10e-01 | 90.5% | 64.9% |
| 2cdcA02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.58 | 46.0 | 3.10e-01 | 92.9% | 30.0% |
| 1pzxA02 | 2.20.28.50 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › DegV, N-terminal domain, peripheral subdomain | 0.57 | 40.0 | 4.13e-01 | 85.7% | 94.3% |
| 7b7nH01 | 2.60.40.3190 | Mainly Beta › Sandwich › Immunoglobulin-like › Herpesvirus glycoprotein H, C-terminal domain | 0.57 | 44.0 | 3.41e-01 | 100.0% | 44.1% |
| 3nyiB01 | 3.40.50.10170 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.57 | 43.0 | 2.98e-01 | 88.1% | 42.0% |
| 2wadA02 | 3.90.1310.10 | Alpha Beta › Alpha-Beta Complex › Penicillin-binding protein 2a (Domain 2) › Penicillin-binding protein 2a (Domain 2) | 0.56 | 41.0 | 2.97e-01 | 85.7% | 27.7% |
| 4x9xA01 | 3.40.50.10170 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.55 | 41.0 | 2.91e-01 | 88.1% | 42.3% |
| 2yt4A01 | 3.30.160.590 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.54 | 37.0 | 3.96e-01 | 71.4% | 88.6% |
| 3rosA01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.53 | 39.0 | 2.53e-01 | 88.1% | 25.0% |
| 2va0A00 | 3.30.450.160 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.51 | 37.0 | 3.02e-01 | 83.3% | 94.9% |
| 1yvuA03 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.51 | 42.0 | 2.96e-01 | 97.6% | 69.2% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4952123 | 3986.2.1.0 ↗ | a+b two layers › GTP-binding protein lepA C-terminal domain-like › Antitoxin Dmd › Antitoxin Dmd | 0.70 | 56.0 | 5.20e-01 | 100.0% | 91.7% |
| 3291392 | 205.1.1.19 ↗ | a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_13 | 0.68 | 58.0 | 4.99e-01 | 100.0% | 97.1% |
| 4962393 | 4187.1.1.2 ↗ | a+b two layers › NosL/MerB-like › NosL/MerB-like › NosL/MerB-like › NosL | 0.68 | 54.0 | 5.34e-01 | 92.9% | 93.3% |
| 5001106 | 2492.1.1.16 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › TM1506 | 0.67 | 53.0 | 3.78e-01 | 95.2% | 54.5% |
| 4237365 | 223.1.1.61 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › SMP_2 | 0.61 | 45.0 | 3.37e-01 | 85.7% | 40.0% |
| 3968758 | 278.1.1.0 ↗ | a+b complex topology › Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain › Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain › Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain | 0.58 | 47.0 | 3.58e-01 | 100.0% | 75.8% |
| 3969006 | 3115.6.1.2 ↗ | a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon › PF28597 | 0.56 | 40.0 | 4.02e-01 | 83.3% | 86.7% |
| 3991455 | 822.2.1.1 ↗ | a+b two layers › GYF/BRK domain-like › BRK domain-like › BRK domain-like › BRK | 0.55 | 42.0 | 3.95e-01 | 92.9% | 69.1% |
| 4025385 | 2003.1.5.82 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_31 | 0.55 | 40.0 | 2.81e-01 | 92.9% | 35.6% |
| 2818339 | 4315.1.1.1 ↗ | beta barrels › Coronavirus NSP8-like › Coronavirus NSP8-like › Coronavirus NSP8-like › CoV_NSP8 | 0.54 | 39.0 | 3.40e-01 | 85.7% | 54.3% |
| 3597842 | 4357.1.1.0 ↗ | beta barrels › WWE domain › WWE domain › WWE domain | 0.54 | 37.0 | 3.46e-01 | 76.2% | 98.3% |
| 3399453 | 386.1.1.1 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 | 0.53 | 39.0 | 3.41e-01 | 83.3% | 54.3% |
| 3286798 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.53 | 46.0 | 3.32e-01 | 100.0% | 52.8% |
| 3223367 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.52 | 37.0 | 3.37e-01 | 83.3% | 100.0% |