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MT451983.1__QKN87757.1__IXEL_57__00056

Bact-Vir

MT451983.1__QKN87757.1__IXEL_57__00056

Identity

Accession:
MT451983 ↗
Kingdom:
phage

Quality

93.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Neferthenavirus› Microbacterium_phage_Ixel

TaxID: 2736269

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-81
PDB
Domain cluster: representative
CATH (35)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2pg0A03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.79 71.0 5.66e-01 97.5% 71.8%
3rguB00 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.76 61.0 5.88e-01 84.8% 89.7%
5af7B03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.76 67.0 5.43e-01 97.5% 71.6%
1r2jA03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.75 67.0 5.42e-01 97.5% 68.8%
1ywmA02 1.20.1270.150 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Surface Active Protein 0.73 56.0 5.73e-01 82.3% 85.5%
5iduC03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.72 65.0 5.11e-01 98.7% 76.1%
1egdA03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.72 63.0 5.21e-01 97.5% 85.8%
1gvnA00 1.10.8.130 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.71 55.0 5.40e-01 83.5% 82.8%
4fm3A00 1.20.1270.390 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.70 55.0 5.15e-01 83.5% 69.5%
1sj8A02 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.69 61.0 5.32e-01 100.0% 83.6%
5h5mA02 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.67 53.0 4.49e-01 84.8% 79.2%
2w02B01 1.10.150.640 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › AcsD, thumb domain, helical bundle 0.67 44.0 4.53e-01 100.0% 71.6%
1yjgA00 1.20.120.240 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Lipoprotein, type 6 0.65 51.0 4.12e-01 86.1% 59.9%
7zcvA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.64 47.0 5.09e-01 93.7% 100.0%
1j77A00 1.20.910.10 Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like 0.62 52.0 3.94e-01 94.9% 92.5%
4akvA02 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.61 47.0 3.58e-01 83.5% 88.4%
3vkgA09 1.20.920.30 Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › 0.59 51.0 4.31e-01 100.0% 61.8%
3o60A00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.59 42.0 3.30e-01 75.9% 82.4%
3axjB02 1.20.58.200 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 2 0.59 42.0 4.10e-01 73.4% 84.7%
4adnA01 1.20.1280.250 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.59 44.0 4.36e-01 82.3% 74.1%
1uurA01 1.20.58.240 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › STAT; domain 1 0.58 42.0 3.78e-01 75.9% 90.0%
2k19A00 1.20.1440.140 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 0.58 49.0 4.66e-01 100.0% 80.6%
3rkgA02 1.20.58.340 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region 0.58 41.0 3.28e-01 75.9% 69.5%
4l8iB00 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.57 42.0 3.76e-01 78.5% 87.5%
3iieB03 1.10.1740.10 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif 0.57 39.0 3.87e-01 81.0% 67.1%
2oc5A01 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.55 48.0 3.51e-01 97.5% 54.0%
4oydB00 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.55 41.0 3.64e-01 81.0% 86.3%
4id0A02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.54 40.0 3.62e-01 81.0% 98.2%
3k3oA02 1.20.58.1360 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.54 37.0 3.72e-01 73.4% 95.2%
3a06B03 1.10.1740.10 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif 0.54 41.0 3.97e-01 82.3% 76.1%
1a41A02 1.20.120.380 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Type 1-topoisomerase catalytic fragment, domain 2 0.53 35.0 3.40e-01 92.4% 57.4%
2bnlC00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.53 43.0 3.65e-01 89.9% 82.1%
3anwB00 1.20.58.2050 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.52 38.0 3.06e-01 78.5% 73.5%
7lb8B02 1.10.3470.10 Mainly Alpha › Orthogonal Bundle › ABC transporter involved in vitamin B12 uptake, BtuC › ABC transporter involved in vitamin B12 uptake, BtuC 0.51 38.0 2.63e-01 82.3% 46.1%
1huxA02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.50 41.0 3.48e-01 92.4% 98.6%
ECOD (53)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3461715 632.1.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain 0.79 62.0 5.72e-01 83.5% 93.0%
4038171 4044.1.1.1 ↗ alpha bundles › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins › Prismane 0.78 61.0 5.88e-01 83.5% 73.3%
4025168 632.7.1.1 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › HSP70 0.75 59.0 5.79e-01 83.5% 77.6%
4322565 632.15.1.4 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Staphylococcal complement inhibitor (SCIN) › Staphylococcal complement inhibitor (SCIN) › HSP70 0.75 58.0 5.73e-01 83.5% 77.6%
4049085 632.7.1.1 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › HSP70 0.74 59.0 5.34e-01 86.1% 63.8%
3338586 632.1.1.12 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain › GAUT_1 0.74 58.0 5.60e-01 84.8% 85.6%
5074955 632.11.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like 0.73 59.0 5.66e-01 87.3% 80.0%
4975860 632.22.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats 0.73 57.0 5.61e-01 83.5% 85.9%
3808173 2484.1.1.1 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 0.73 57.0 5.86e-01 83.5% 88.0%
3455330 632.15.1.4 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Staphylococcal complement inhibitor (SCIN) › Staphylococcal complement inhibitor (SCIN) › HSP70 0.73 57.0 5.83e-01 83.5% 88.0%
4667966 632.7.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain 0.72 58.0 5.11e-01 86.1% 60.0%
4142527 632.7.1.1 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › HSP70 0.72 57.0 5.02e-01 84.8% 59.1%
4453799 632.7.1.1 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › HSP70 0.72 58.0 3.64e-01 86.1% 17.2%
4520066 632.7.1.1 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › HSP70 0.72 57.0 5.07e-01 86.1% 60.0%
4318044 632.7.1.1 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › HSP70 0.72 58.0 5.60e-01 89.9% 76.7%
4469387 632.7.1.1 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › HSP70 0.72 57.0 4.98e-01 86.1% 57.5%
3420431 632.7.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain 0.71 53.0 5.25e-01 82.3% 75.3%
4479748 632.7.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain 0.71 55.0 5.30e-01 84.8% 76.7%
4938670 632.11.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like 0.70 52.0 5.38e-01 83.5% 84.0%
1281062 632.18.1.1 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › hypothetical protein PA2901 › hypothetical protein PA2901 › DUF4398 0.70 55.0 5.15e-01 83.5% 68.8%
3615878 632.1.1.3 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain › Alpha-mann_mid 0.70 56.0 5.24e-01 84.8% 75.8%
3475373 1128.1.1.2 ↗ alpha bundles › LYR protein › LYR protein › LYR protein › Complex1_LYR_2 0.70 52.0 5.34e-01 83.5% 82.7%
3374716 1128.1.1.1 ↗ alpha bundles › LYR protein › LYR protein › LYR protein › Complex1_LYR 0.70 53.0 5.31e-01 81.0% 78.8%
4062149 632.7.1.1 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › HSP70 0.70 55.0 4.96e-01 86.1% 62.7%
3621337 1128.1.1.2 ↗ alpha bundles › LYR protein › LYR protein › LYR protein › Complex1_LYR_2 0.69 54.0 4.64e-01 84.8% 54.2%
4192675 632.15.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Staphylococcal complement inhibitor (SCIN) › Staphylococcal complement inhibitor (SCIN) 0.69 53.0 5.02e-01 83.5% 73.7%
4237257 632.15.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Staphylococcal complement inhibitor (SCIN) › Staphylococcal complement inhibitor (SCIN) 0.69 53.0 5.11e-01 83.5% 81.1%
4959130 632.11.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like 0.67 51.0 5.29e-01 83.5% 92.9%
3697293 4336.1.1.5 ↗ alpha duplicates or obligate multimers › YheA/YmcA-like › YheA/YmcA-like › YheA/YmcA-like › HAM1_N 0.65 46.0 3.99e-01 74.7% 54.4%
1144175 632.2.1.3 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Bacterial immunoglobulin/albumin-binding domains › Bacterial immunoglobulin/albumin-binding domains › FIVAR 0.64 46.0 4.87e-01 81.0% 92.4%
3244102 192.8.1.0 ↗ alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain 0.64 48.0 4.38e-01 81.0% 90.9%
5082774 4323.1.1.0 ↗ alpha bundles › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C 0.63 45.0 3.67e-01 75.9% 72.0%
4164611 109.4.1.83 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Suf 0.62 43.0 2.84e-01 73.4% 46.2%
3420476 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.59 37.0 3.83e-01 97.5% 65.3%
3586517 604.3.1.0 ↗ alpha bundles › Spectrin repeat-like › BAG domain › BAG domain 0.59 41.0 4.16e-01 72.2% 93.8%
3341560 101.1.17.18 ↗ alpha arrays › HTH › HTH › FF domain › FF_PRPF40A 0.58 34.0 3.60e-01 77.2% 65.7%
3740332 1128.1.1.0 ↗ alpha bundles › LYR protein › LYR protein › LYR protein 0.58 46.0 4.63e-01 86.1% 86.3%
4093066 101.11.1.1 ↗ alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › PNPase 0.58 44.0 4.38e-01 92.4% 78.8%
4024003 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.58 51.0 4.24e-01 100.0% 82.1%
3473298 3277.2.1.1 ↗ alpha arrays › Thymine dioxygenase JBP1 DNA-binding domain-like › a C-terminal domain in chromodomain helicase DNA-binding protein 1 › a C-terminal domain in chromodomain helicase DNA-binding protein 1 › CHD1-like_C 0.58 46.0 4.06e-01 86.1% 76.5%
1933314 1134.1.1.0 ↗ alpha bundles › C-terminal helical domain of alanine-tRNA ligase › C-terminal helical domain of alanine-tRNA ligase › Eukaryotic C-Ala helical domain 0.57 41.0 4.19e-01 75.9% 85.5%
3829031 193.1.1.3 ↗ alpha bundles › CH domain-like › Calponin-homology domain-like › Calponin-homology domain-like › Ndc80_HEC 0.56 44.0 3.92e-01 84.8% 61.7%
3901917 1134.1.1.7 ↗ alpha bundles › C-terminal helical domain of alanine-tRNA ligase › C-terminal helical domain of alanine-tRNA ligase › Eukaryotic C-Ala helical domain › ALA1 0.56 41.0 4.31e-01 77.2% 88.6%
3461725 592.2.1.2 ↗ alpha arrays › PWI domain-like › YugE-like › YugE-like › WGG 0.54 44.0 3.93e-01 93.7% 64.2%
3448849 605.8.1.5 ↗ alpha duplicates or obligate multimers › ROP-like › BAS1536-like › BAS1536-like › Med26 0.53 38.0 4.08e-01 74.7% 100.0%
5048577 621.1.1.0 ↗ alpha bundles › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain 0.52 40.0 4.03e-01 89.9% 82.5%
4240243 304.41.1.1 ↗ a+b two layers › Alpha-beta plaits › Glutamyl tRNA-reductase catalytic, N-terminal domain › Glutamyl tRNA-reductase catalytic, N-terminal domain › GlutR_N 0.52 45.0 3.68e-01 100.0% 52.4%
3800920 3718.1.1.0 ↗ alpha bundles › Flagellar protein fliT › Flagellar protein fliT › Flagellar protein fliT 0.52 39.0 3.49e-01 82.3% 80.9%
3489468 197.1.1.1 ↗ alpha bundles › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like › FERM_M 0.52 39.0 3.50e-01 84.8% 94.2%
5030446 142.1.1.3 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 0.51 43.0 4.23e-01 93.7% 88.2%
3386308 604.3.1.46 ↗ alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › PF28048 0.51 38.0 3.70e-01 82.3% 71.1%
3519127 4979.2.1.1 ↗ alpha arrays › C-terminal domain of Hypothetical protein MPN330-like › XRN2-binding domain (XTBD) › XRN2-binding domain (XTBD) › XTBD 0.51 38.0 3.84e-01 98.7% 81.2%
3696602 244.1.1.6 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › Amino_oxidase 0.51 40.0 2.64e-01 87.3% 93.5%
D2 high residues 86-140
PDB
Domain cluster: rep: MN908685.1__QIG58051.1__SEA_PAULODIABOLI_367__00323__D21-74
CATH (36)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5tjjB02 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.70 55.0 3.82e-01 89.1% 26.4%
4oycB00 3.30.300.30 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain 0.68 48.0 4.07e-01 74.5% 47.2%
4fxdA05 3.90.1600.10 Alpha Beta › Alpha-Beta Complex › Palm domain of DNA polymerase › B family DNA polymerase, palm domain 0.64 44.0 3.47e-01 72.7% 39.3%
2f96A00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.60 43.0 2.91e-01 76.4% 80.1%
6j09A02 3.10.20.310 Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac 0.60 42.0 3.78e-01 74.5% 52.6%
2q5wE00 3.90.1170.40 Alpha Beta › Alpha-Beta Complex › Aldehyde Oxidoreductase; domain 3 › Molybdopterin biosynthesis MoaE subunit 0.60 46.0 3.55e-01 87.3% 67.9%
1vzyA01 3.55.30.10 Alpha Beta › 3-Layer(bab) Sandwich › Hsp33 domain › Hsp33 domain 0.58 50.0 3.35e-01 100.0% 97.9%
3es1A01 2.20.70.150 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › 0.58 36.0 4.09e-01 98.2% 91.9%
3udcA03 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 47.0 4.00e-01 87.3% 94.3%
1xttB00 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.58 42.0 2.81e-01 76.4% 88.5%
6j09A04 3.10.20.310 Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac 0.58 41.0 3.74e-01 76.4% 55.8%
2qdfA02 3.10.20.310 Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac 0.58 41.0 3.61e-01 74.5% 49.4%
1vq0A01 3.55.30.10 Alpha Beta › 3-Layer(bab) Sandwich › Hsp33 domain › Hsp33 domain 0.58 49.0 3.31e-01 100.0% 35.2%
3r1kA01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.57 37.0 2.83e-01 80.0% 27.8%
4gs5A01 3.40.50.12780 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain 0.56 42.0 2.79e-01 83.6% 67.2%
3c6kB03 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.55 41.0 2.88e-01 81.8% 25.7%
4akrA02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.55 42.0 3.14e-01 87.3% 31.3%
3k3dA00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.55 39.0 3.14e-01 80.0% 73.8%
3l9bA00 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.54 47.0 3.65e-01 100.0% 92.1%
3n5fA02 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.54 43.0 3.48e-01 87.3% 89.5%
1wnhA01 3.10.450.10 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.54 44.0 3.66e-01 90.9% 57.0%
1bd3A00 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.54 37.0 2.46e-01 70.9% 18.8%
1e3hA01 3.30.230.70 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › GHMP Kinase, N-terminal domain 0.54 42.0 2.93e-01 100.0% 97.6%
6x5vA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 46.0 3.90e-01 100.0% 93.8%
1vwxP00 3.90.470.10 Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › Ribosomal protein L22/L17 0.53 44.0 3.28e-01 96.4% 73.9%
4atnA03 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.52 40.0 2.82e-01 85.5% 41.8%
8hbfB01 3.90.1520.10 Alpha Beta › Alpha-Beta Complex › H-NOX domain › H-NOX domain 0.52 36.0 2.68e-01 78.2% 65.7%
4lrzE01 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.52 44.0 3.15e-01 100.0% 54.5%
1sh8B00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.52 40.0 3.10e-01 92.7% 57.0%
2nyhA00 3.30.70.1240 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › DOPA-like domains 0.51 38.0 3.00e-01 85.5% 37.1%
2fwvA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.51 37.0 2.63e-01 80.0% 24.2%
4gs5A02 3.30.300.30 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain 0.51 40.0 3.33e-01 87.3% 50.5%
1ia9A02 3.20.200.10 Alpha Beta › Alpha-Beta Barrel › Protein kinase-like fold › MHCK/EF2 kinase 0.50 41.0 3.45e-01 96.4% 84.9%
1j27A00 3.30.70.1120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › TT1725-like 0.50 43.0 3.61e-01 100.0% 83.7%
1kfiA04 3.30.310.50 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain 0.50 40.0 3.25e-01 98.2% 82.4%
7r5mA01 3.30.559.10 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain 0.50 41.0 2.85e-01 100.0% 81.6%
ECOD (42)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3762698 223.1.1.78 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › GPR158_179_EC 0.64 49.0 3.35e-01 83.6% 24.5%
3614118 2004.1.1.87 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.62 42.0 2.44e-01 70.9% 7.2%
4008588 101.1.9.63 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › Bro-N 0.61 47.0 3.81e-01 85.5% 73.6%
3727442 101.1.2.569 ↗ alpha arrays › HTH › HTH › winged helix domain › PF28722 0.60 46.0 3.55e-01 83.6% 68.8%
3389084 3937.1.1.2 ↗ alpha bundles › Connexin 26 › Connexin 26 › Connexin 26 › Innexin 0.60 51.0 3.22e-01 100.0% 56.7%
3931669 304.4.1.54 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › Amnionless 0.60 42.0 3.10e-01 74.5% 90.7%
4290012 848.1.1.1 ↗ a+b complex topology › Hsp33 domain › Hsp33 domain › Hsp33 domain › HSP33 0.60 51.0 3.41e-01 100.0% 34.2%
3389626 4292.2.1.0 ↗ a+b two layers › FlaG-like › MAGUK binding stalk (MBS) domain › MAGUK binding stalk (MBS) domain 0.60 42.0 3.82e-01 80.0% 54.7%
3181301 101.1.2.569 ↗ alpha arrays › HTH › HTH › winged helix domain › PF28722 0.60 47.0 3.44e-01 85.5% 62.1%
4422273 848.1.1.1 ↗ a+b complex topology › Hsp33 domain › Hsp33 domain › Hsp33 domain › HSP33 0.60 51.0 3.42e-01 100.0% 97.9%
3924318 6166.1.1.0 ↗ alpha bundles › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › N-terminal domain of Delta(14)-sterol reductase, MaSR1 0.59 41.0 2.89e-01 74.5% 90.8%
3229557 3937.1.1.2 ↗ alpha bundles › Connexin 26 › Connexin 26 › Connexin 26 › Innexin 0.59 49.0 3.06e-01 100.0% 57.9%
4068330 848.1.1.1 ↗ a+b complex topology › Hsp33 domain › Hsp33 domain › Hsp33 domain › HSP33 0.59 51.0 3.39e-01 100.0% 89.6%
4352124 848.1.1.1 ↗ a+b complex topology › Hsp33 domain › Hsp33 domain › Hsp33 domain › HSP33 0.58 50.0 3.25e-01 100.0% 32.2%
3556744 101.1.2.79 ↗ alpha arrays › HTH › HTH › winged helix domain › RNA_pol_I_A49 0.58 45.0 4.04e-01 83.6% 92.0%
4095799 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.58 42.0 2.67e-01 78.2% 15.3%
3414363 3937.1.1.2 ↗ alpha bundles › Connexin 26 › Connexin 26 › Connexin 26 › Innexin 0.57 47.0 2.97e-01 100.0% 61.4%
3211111 3937.1.1.2 ↗ alpha bundles › Connexin 26 › Connexin 26 › Connexin 26 › Innexin 0.57 46.0 2.92e-01 100.0% 56.0%
3200375 101.1.2.569 ↗ alpha arrays › HTH › HTH › winged helix domain › PF28722 0.57 44.0 2.78e-01 83.6% 30.9%
3627409 6166.1.1.1 ↗ alpha bundles › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › ERG4_ERG24 0.56 42.0 2.93e-01 83.6% 51.0%
3412282 220.1.1.22 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C 0.56 40.0 3.24e-01 83.6% 36.7%
3273309 7581.1.1.2 ↗ a/b three-layered sandwiches › Thiolase-like › Thiolase-like › Thiolase-like › ketoacyl-synt 0.55 46.0 3.28e-01 100.0% 89.2%
4169399 304.14.1.1 ↗ a+b two layers › Alpha-beta plaits › Sporulation related repeat (SPOR) › Sporulation related repeat (SPOR) › SPOR 0.55 41.0 3.68e-01 80.0% 57.0%
3738674 101.1.2.207 ↗ alpha arrays › HTH › HTH › winged helix domain › TFC3_eWH 0.55 43.0 3.45e-01 85.5% 80.9%
3597257 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.54 41.0 3.66e-01 81.8% 92.5%
4020396 3501.1.1.0 ↗ a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 0.54 38.0 3.40e-01 80.0% 96.7%
3379619 328.12.1.0 ↗ a+b two layers › IF3-like › IF3-like domain in Nudix hydrolase › IF3-like domain in Nudix hydrolase 0.54 41.0 2.61e-01 81.8% 20.8%
3215999 5001.1.1.111 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1, 7TM_GPCR_Srw 0.54 45.0 2.74e-01 94.5% 80.8%
3381087 2003.1.5.115 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_29 0.54 43.0 2.67e-01 89.1% 20.0%
3545962 192.8.1.247 ↗ alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › Erf4 0.54 39.0 3.08e-01 80.0% 76.2%
4898995 3121.1.1.1 ↗ a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA 0.53 39.0 3.42e-01 81.8% 50.0%
3283013 3576.1.1.1 ↗ a+b complex topology › Cas8-like › Cascade subunit CasA/Cse1/Cas8 › Cascade subunit CasA/Cse1/Cas8 › CRISPR_Cse1 0.53 47.0 2.75e-01 100.0% 31.1%
4538612 314.1.1.0 ↗ a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases 0.53 37.0 2.35e-01 78.2% 22.5%
5071253 300.1.1.6 ↗ a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › Regulator_TrmB 0.53 47.0 3.44e-01 98.2% 84.3%
3283943 304.8.1.80 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › DUF6196 0.53 35.0 3.32e-01 76.4% 54.3%
3292011 2003.1.5.154 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_29, Methyltransf_11 0.52 43.0 2.58e-01 100.0% 76.2%
3943236 223.1.1.104 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PF26965 0.52 44.0 3.13e-01 100.0% 53.0%
4881206 3121.1.1.1 ↗ a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA 0.52 37.0 3.38e-01 81.8% 54.1%
3225873 3937.1.1.2 ↗ alpha bundles › Connexin 26 › Connexin 26 › Connexin 26 › Innexin 0.52 42.0 2.58e-01 90.9% 52.4%
3525255 320.1.1.8 ↗ a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H_PUS7L 0.52 42.0 3.73e-01 90.9% 95.0%
4137378 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.50 43.0 3.37e-01 100.0% 83.2%
3892129 216.1.1.3 ↗ a+b two layers › UBC-like › UBC-like › UBC-like › UEV 0.50 39.0 3.05e-01 92.7% 36.4%