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MT457552.1__QJT71725.1__TH1_041__00041
Bact-VirMT457552.1__QJT71725.1__TH1_041__00041
Identity
- Accession:
- MT457552 ↗
- Kingdom:
- phage
Quality
89.8
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Straboviridae›
Shewanella_phage_Thanatos-1
TaxID: 2734808
Cluster
View cluster (8 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 36-135
Domain cluster:
rep: qs_7_scaffold_0_curated_closed_complete_prodigal-single.1__X__X__00207__D32-129
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF10715.17 best | REGB_T4 | 102.4 | 3.70e-29 | 100.0% | 73.7% |
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1y4oA00 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.59 | 42.0 | 4.16e-01 | 86.0% | 70.2% |
| 1skoA00 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.59 | 43.0 | 4.14e-01 | 94.0% | 66.4% |
| 4brcA02 | 3.30.420.150 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Exopolyphosphatase. Domain 2 | 0.58 | 42.0 | 3.30e-01 | 78.0% | 80.3% |
| 3hrgA02 | 3.30.420.260 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Protein of unknown function DUF3822, C-terminal domain | 0.55 | 38.0 | 3.69e-01 | 73.0% | 67.5% |
| 1j3wC00 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.54 | 42.0 | 3.92e-01 | 85.0% | 74.4% |
| 3hi0A02 | 3.30.420.150 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Exopolyphosphatase. Domain 2 | 0.54 | 38.0 | 3.18e-01 | 75.0% | 95.6% |
| 6h5bB01 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.53 | 42.0 | 4.01e-01 | 87.0% | 84.9% |
| 1kz7C02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.53 | 46.0 | 4.17e-01 | 97.0% | 85.4% |
| 1luiA00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.53 | 37.0 | 3.67e-01 | 74.0% | 89.8% |
| 4a18P00 | 3.30.720.90 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.52 | 34.0 | 4.04e-01 | 95.0% | 100.0% |
| 1v1qA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 31.0 | 3.03e-01 | 89.0% | 51.8% |
| 3e4vA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.51 | 39.0 | 3.31e-01 | 82.0% | 82.8% |
| 1u6zA02 | 3.30.420.150 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Exopolyphosphatase. Domain 2 | 0.51 | 37.0 | 3.09e-01 | 76.0% | 100.0% |
| 4pmwA02 | 2.40.50.700 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.50 | 29.0 | 3.12e-01 | 100.0% | 66.7% |
| 3k6oA01 | 2.40.50.500 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › NigD-like N-terminal OB domain | 0.50 | 27.0 | 3.00e-01 | 100.0% | 65.8% |
| 3d2lA02 | 2.20.25.110 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases | 0.50 | 27.0 | 3.18e-01 | 87.0% | 77.8% |
ECOD (40)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5071213 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.68 | 52.0 | 5.72e-01 | 86.0% | 100.0% |
| 5042309 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.65 | 50.0 | 5.24e-01 | 88.0% | 88.9% |
| 3470260 | 223.2.1.12 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › MAPKK1_Int | 0.60 | 46.0 | 4.27e-01 | 96.0% | 62.2% |
| 5075528 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.60 | 50.0 | 5.20e-01 | 96.0% | 100.0% |
| 3589803 | 2484.1.1.144 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DEDD_Tnp_IS110 | 0.60 | 41.0 | 4.20e-01 | 72.0% | 98.0% |
| 3204747 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.59 | 52.0 | 3.78e-01 | 97.0% | 90.3% |
| 5030870 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.59 | 49.0 | 5.12e-01 | 95.0% | 100.0% |
| 3597839 | 206.1.3.57 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › FAM91_C | 0.58 | 37.0 | 2.75e-01 | 87.0% | 25.6% |
| 4927204 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.58 | 45.0 | 4.65e-01 | 95.0% | 93.3% |
| 4928046 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.58 | 48.0 | 4.55e-01 | 92.0% | 89.2% |
| 3087264 | 223.2.1.5 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 | 0.58 | 45.0 | 4.45e-01 | 83.0% | 91.4% |
| 3413401 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.58 | 39.0 | 2.53e-01 | 70.0% | 66.0% |
| 3198214 | 274.1.1.48 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits › DUF7924 | 0.57 | 38.0 | 4.36e-01 | 70.0% | 97.1% |
| 4928738 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.57 | 46.0 | 4.33e-01 | 95.0% | 71.1% |
| 5052577 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.57 | 45.0 | 4.17e-01 | 95.0% | 66.9% |
| 3401904 | 223.2.1.5 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 | 0.57 | 40.0 | 3.97e-01 | 86.0% | 68.2% |
| 3727689 | 2008.1.1.143 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF7924 | 0.56 | 47.0 | 3.57e-01 | 92.0% | 93.9% |
| 5053632 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.56 | 46.0 | 4.35e-01 | 94.0% | 73.6% |
| 4927372 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.54 | 42.0 | 4.08e-01 | 96.0% | 74.8% |
| 5044876 | 331.10.2.0 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase | 0.54 | 32.0 | 3.53e-01 | 86.0% | 72.5% |
| 3192050 | 2484.1.1.176 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Hexokinase_1+Hexokinase_2 | 0.54 | 46.0 | 2.93e-01 | 95.0% | 81.2% |
| 3728783 | 223.2.1.15 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Longin | 0.54 | 43.0 | 3.84e-01 | 86.0% | 94.3% |
| 4965055 | 223.2.1.63 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › DUF7522 | 0.53 | 42.0 | 3.89e-01 | 96.0% | 65.2% |
| 4002901 | 223.2.1.12 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › MAPKK1_Int | 0.53 | 41.0 | 3.73e-01 | 84.0% | 96.4% |
| 3800831 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.53 | 45.0 | 2.94e-01 | 95.0% | 76.8% |
| 3183393 | 223.2.1.5 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 | 0.53 | 40.0 | 4.09e-01 | 81.0% | 100.0% |
| 4890947 | 223.2.1.5 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 | 0.53 | 41.0 | 4.00e-01 | 83.0% | 85.7% |
| 3591129 | 2484.1.1.2 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Actin | 0.53 | 39.0 | 2.80e-01 | 79.0% | 64.7% |
| 3599007 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.53 | 41.0 | 4.15e-01 | 85.0% | 96.0% |
| 3536437 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.53 | 42.0 | 3.81e-01 | 96.0% | 61.4% |
| 3907113 | 220.1.1.66 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH | 0.53 | 46.0 | 4.05e-01 | 99.0% | 81.3% |
| 3838239 | 2484.1.1.262 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF27037 | 0.53 | 37.0 | 3.17e-01 | 74.0% | 84.7% |
| 4026745 | 223.2.1.15 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Longin | 0.52 | 47.0 | 4.08e-01 | 100.0% | 85.8% |
| 3628236 | 4291.1.1.1 ↗ | beta barrels › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol_BP | 0.52 | 38.0 | 2.56e-01 | 77.0% | 74.1% |
| 3354236 | 2484.1.1.15 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › GDA1_CD39 | 0.52 | 40.0 | 2.94e-01 | 84.0% | 88.7% |
| 3613596 | 2004.1.1.427 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › RHSP, RHS_N | 0.52 | 46.0 | 3.14e-01 | 99.0% | 55.1% |
| 3598722 | 5.1.11.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed | 0.51 | 45.0 | 3.08e-01 | 100.0% | 90.5% |
| 3607901 | 2004.1.1.427 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › RHSP, RHS_N | 0.51 | 45.0 | 3.01e-01 | 99.0% | 50.9% |
| 3486200 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.50 | 42.0 | 2.82e-01 | 95.0% | 24.0% |
| 3784417 | 2484.1.1.176 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Hexokinase_1+Hexokinase_2 | 0.50 | 43.0 | 2.80e-01 | 96.0% | 88.1% |