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MT457552.1__QJT71745.1__TH1_061__00061
Bact-VirMT457552.1__QJT71745.1__TH1_061__00061
Identity
- Accession:
- MT457552 ↗
- Kingdom:
- phage
Quality
84.7
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Straboviridae›
Shewanella_phage_Thanatos-1
TaxID: 2734808
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-115
Domain cluster:
rep: SR-VP_4-6_scaffold_141_4086954_prodigal-single.1__X__X__00024__D2-93
D2
high
residues 122-195
Domain cluster:
representative
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 8cuyA01 | 1.10.1200.10 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like | 0.69 | 52.0 | 5.27e-01 | 82.4% | 100.0% |
| 5mswA01 | 1.10.1200.10 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like | 0.68 | 52.0 | 4.87e-01 | 82.4% | 82.6% |
| 8aigA01 | 1.10.1200.10 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like | 0.66 | 53.0 | 5.32e-01 | 90.5% | 100.0% |
| 2n5hA00 | 1.10.1200.10 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like | 0.65 | 52.0 | 4.92e-01 | 89.2% | 97.8% |
| 2l4bA00 | 1.10.1200.10 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like | 0.64 | 54.0 | 5.16e-01 | 97.3% | 100.0% |
| 2mr7A00 | 1.10.1200.10 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like | 0.64 | 51.0 | 4.87e-01 | 90.5% | 86.8% |
| 3ce7A00 | 1.10.1200.10 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like | 0.64 | 52.0 | 4.99e-01 | 93.2% | 97.8% |
| 2lkiA00 | 1.10.1200.10 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like | 0.63 | 50.0 | 4.88e-01 | 89.2% | 100.0% |
| 2fgyA01 | 1.20.120.1310 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Carboxysome Shell Carbonic Anhydrase, N-terminal helical domain | 0.61 | 49.0 | 4.39e-01 | 89.2% | 68.2% |
| 4a64A01 | 1.20.1310.10 | Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats | 0.61 | 43.0 | 3.59e-01 | 74.3% | 93.2% |
| 2cg5B00 | 1.10.1200.10 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like | 0.59 | 45.0 | 4.62e-01 | 86.5% | 100.0% |
| 3f4mA00 | 1.20.1440.160 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Tumor necrosis factor alpha-induced protein 8-like | 0.54 | 39.0 | 3.24e-01 | 79.7% | 93.5% |
| 1kxpD03 | 1.10.246.10 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.52 | 42.0 | 4.00e-01 | 91.9% | 95.5% |
| 3hssA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.51 | 42.0 | 2.97e-01 | 98.6% | 87.6% |
| 3t57A02 | 1.20.1180.10 | Mainly Alpha › Up-down Bundle › Udp N-acetylglucosamine O-acyltransferase; Domain 2 › Udp N-acetylglucosamine O-acyltransferase, C-terminal domain | 0.50 | 37.0 | 3.72e-01 | 81.1% | 98.7% |
ECOD (26)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3281143 | 132.1.1.1 ↗ | alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › PP-binding | 0.72 | 54.0 | 5.30e-01 | 79.7% | 92.5% |
| 3949742 | 132.1.1.1 ↗ | alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › PP-binding | 0.69 | 58.0 | 5.25e-01 | 93.2% | 84.0% |
| 3288850 | 132.1.1.1 ↗ | alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › PP-binding | 0.69 | 57.0 | 5.21e-01 | 93.2% | 85.0% |
| 4075489 | 132.1.1.1 ↗ | alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › PP-binding | 0.67 | 54.0 | 5.24e-01 | 89.2% | 89.4% |
| 3956327 | 132.1.1.1 ↗ | alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › PP-binding | 0.67 | 53.0 | 4.89e-01 | 87.8% | 81.0% |
| 3994179 | 132.1.1.1 ↗ | alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › PP-binding | 0.67 | 60.0 | 5.74e-01 | 100.0% | 96.5% |
| 3954304 | 132.1.1.1 ↗ | alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › PP-binding | 0.66 | 53.0 | 5.17e-01 | 90.5% | 96.4% |
| 3023231 | 132.1.1.1 ↗ | alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › PP-binding | 0.66 | 55.0 | 5.31e-01 | 93.2% | 94.0% |
| 4648595 | 132.1.1.1 ↗ | alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › PP-binding | 0.65 | 55.0 | 5.41e-01 | 94.6% | 96.2% |
| 3961382 | 132.1.1.1 ↗ | alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › PP-binding | 0.65 | 52.0 | 5.09e-01 | 89.2% | 100.0% |
| 3288781 | 132.1.1.1 ↗ | alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › PP-binding | 0.65 | 57.0 | 5.46e-01 | 98.6% | 94.1% |
| 3838492 | 132.1.1.1 ↗ | alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › PP-binding | 0.65 | 52.0 | 5.10e-01 | 91.9% | 92.8% |
| 4359319 | 132.1.1.6 ↗ | alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › DUF7080 | 0.65 | 54.0 | 4.94e-01 | 94.6% | 89.0% |
| 3519543 | 132.1.1.2 ↗ | alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › Ribosomal_L50 | 0.64 | 50.0 | 5.04e-01 | 86.5% | 94.7% |
| 3206582 | 132.1.1.1 ↗ | alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › PP-binding | 0.63 | 56.0 | 5.01e-01 | 100.0% | 96.2% |
| 4263803 | 132.1.1.0 ↗ | alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) | 0.63 | 53.0 | 4.99e-01 | 93.2% | 93.3% |
| 4518850 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.63 | 49.0 | 3.08e-01 | 87.8% | 16.6% |
| 3677912 | 4202.1.1.0 ↗ | alpha duplicates or obligate multimers › Hermes dimerisation domain › Hermes dimerisation domain › Hermes dimerisation domain | 0.63 | 38.0 | 4.04e-01 | 73.0% | 69.2% |
| 4337213 | 132.1.1.1 ↗ | alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › PP-binding | 0.63 | 54.0 | 4.72e-01 | 97.3% | 89.4% |
| 4012871 | 132.1.1.0 ↗ | alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) | 0.62 | 53.0 | 4.74e-01 | 98.6% | 97.3% |
| 5028755 | 192.5.1.0 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat | 0.60 | 45.0 | 4.23e-01 | 86.5% | 64.2% |
| 2872285 | 132.1.1.0 ↗ | alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) | 0.60 | 50.0 | 4.53e-01 | 93.2% | 86.0% |
| 3787321 | 3343.1.1.2 ↗ | alpha complex topology › gamma-tubulin complex protein 4 (GCP4) › gamma-tubulin complex protein 4 (GCP4) › gamma-tubulin complex protein 4 (GCP4) › GCP_C_terminal,GCP_N_terminal | 0.55 | 44.0 | 2.58e-01 | 89.2% | 14.3% |
| 3728444 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.52 | 37.0 | 3.39e-01 | 77.0% | 59.0% |
| 3979958 | 3009.1.1.0 ↗ | alpha arrays › Insertion subdomain in DsbA-like › Insertion subdomain in DsbA-like › Insertion subdomain in DsbA-like | 0.51 | 36.0 | 3.48e-01 | 75.7% | 76.4% |
| 3828246 | 101.1.2.396 ↗ | alpha arrays › HTH › HTH › winged helix domain › WHD_ROQ1 | 0.51 | 41.0 | 3.69e-01 | 91.9% | 68.2% |