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MT459794.1__QKN88720.1__X__00026

Bact-Vir

MT459794.1__QKN88720.1__X__00026

Identity

Accession:
MT459794 ↗
Kingdom:
phage

Quality

63.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 22-69
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF05894.19 best Podovirus_Gp16 77.2 2.30e-21 100.0% 14.5%
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1i39A02 1.10.10.460 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Ribonuclease hii. Domain 2 0.57 40.0 4.11e-01 91.7% 80.0%
1iurA01 1.10.287.110 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain 0.55 47.0 4.36e-01 100.0% 81.0%
3purA03 1.20.58.1360 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.53 42.0 3.43e-01 100.0% 59.1%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3313644 2484.1.1.67 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 0.57 47.0 3.82e-01 100.0% 63.8%
3177200 314.1.1.12 a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › LplA-B_cat 0.50 39.0 2.49e-01 87.5% 15.4%