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MT478991.1__QMP82549.1__X__00139

Bact-Vir

MT478991.1__QMP82549.1__X__00139

Identity

Accession:
MT478991 ↗
Kingdom:
phage

Quality

88.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pantevenvirales› Straboviridae› Krischvirus› Escherichia_phage_vB_EcoM_011D4

TaxID: 2735300

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-47
PDB
Domain cluster: rep: OK330455.1__UDF60314.1__Kopi_042__00042__D5-48
CATH (78)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5ncsA02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.71 48.0 3.42e-01 72.7% 68.3%
2gupA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.69 59.0 4.65e-01 100.0% 56.7%
3f5rA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.69 59.0 4.42e-01 100.0% 45.1%
4htlA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.68 58.0 4.53e-01 100.0% 57.0%
3r8eA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.68 56.0 4.08e-01 100.0% 44.3%
5nckA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.67 57.0 4.42e-01 100.0% 57.1%
4ifaA01 3.40.33.10 Alpha Beta › 3-Layer(aba) Sandwich › Pathogenesis-related Protein p14a › CAP 0.66 53.0 3.29e-01 95.5% 15.8%
5tkwA02 3.30.420.370 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › GspL cytoplasmic domain, C-terminal subdomain 0.66 52.0 4.71e-01 100.0% 63.6%
3vglA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.65 55.0 3.97e-01 100.0% 42.4%
3fssA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.65 54.0 4.38e-01 93.2% 48.8%
2ap1A01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.65 55.0 3.96e-01 100.0% 43.9%
3h6eB01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.65 54.0 4.28e-01 100.0% 67.7%
4hkqA04 3.10.20.370 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.65 54.0 4.65e-01 100.0% 92.1%
1xc3A01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.65 55.0 4.30e-01 100.0% 52.4%
4v19S00 3.30.420.80 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribosomal protein S11/S14 0.64 53.0 3.81e-01 100.0% 48.3%
4ijaB02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.64 53.0 3.73e-01 100.0% 40.1%
1z05A02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.64 53.0 3.78e-01 100.0% 42.2%
1c9rA04 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.64 53.0 4.13e-01 100.0% 61.7%
2qm1B01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.64 54.0 3.78e-01 100.0% 43.4%
2aehA03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.64 55.0 4.17e-01 100.0% 55.0%
3mcpA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.64 53.0 4.09e-01 100.0% 55.4%
1vq8N00 3.30.420.100 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 0.64 50.0 3.43e-01 95.5% 52.2%
3dcxA00 2.30.29.50 Mainly Beta › Roll › PH-domain like › Bacterial Pleckstrin homology domain 0.63 50.0 3.77e-01 93.2% 38.5%
1bdyA00 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.63 49.0 3.62e-01 88.6% 74.8%
4qxaB00 2.30.29.230 Mainly Beta › Roll › PH-domain like › 0.63 53.0 3.74e-01 100.0% 46.9%
1woqA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.62 52.0 4.01e-01 100.0% 59.8%
5f7pA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.62 51.0 3.85e-01 100.0% 48.8%
3htvA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.62 51.0 3.95e-01 100.0% 55.9%
3hz6A01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.62 52.0 3.29e-01 100.0% 29.2%
3k6qA02 3.30.160.620 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.61 52.0 4.18e-01 97.7% 94.4%
2mqdA00 3.30.1460.60 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.61 53.0 3.91e-01 100.0% 77.3%
1t9kA01 1.20.120.420 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › translation initiation factor eif-2b, domain 1 0.61 49.0 3.53e-01 95.5% 35.0%
4o5fA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.61 50.0 3.72e-01 100.0% 57.3%
4bv4R00 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.61 47.0 2.73e-01 88.6% 18.4%
3i3lA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.61 47.0 2.73e-01 84.1% 21.9%
1hkgA02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.61 50.0 3.71e-01 100.0% 55.4%
1xr0B01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.60 50.0 4.08e-01 100.0% 75.8%
3t69A01 3.30.420.300 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 2-keto-3-deoxy-galactonokinase, substrate binding domain 0.60 50.0 4.33e-01 100.0% 81.3%
4i3gA04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 51.0 3.84e-01 100.0% 94.7%
6j5cA02 3.30.67.10 Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 2 › Viral Envelope Glycoprotein, domain 2 0.59 50.0 4.16e-01 100.0% 57.8%
2lmcB00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.59 47.0 4.34e-01 100.0% 67.2%
2hjjA00 3.30.160.130 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › ykff protein like domains 0.59 47.0 4.30e-01 97.7% 75.8%
1wguA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.59 49.0 3.73e-01 100.0% 59.1%
7k7jA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 50.0 3.81e-01 97.7% 99.1%
1j0wB00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.59 48.0 3.82e-01 100.0% 64.1%
4dm5A00 3.30.1450.10 Alpha Beta › 2-Layer Sandwich › Beta-lactamase Inhibitory Protein; Chain:B, domain 1 › 0.59 45.0 3.70e-01 88.6% 51.7%
7r8iA01 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.59 49.0 3.21e-01 100.0% 31.3%
4n06A01 3.100.10.20 Alpha Beta › Ribosomal Protein L15; Chain: K; domain 2 › Ribosomal Protein L15; Chain: K; domain 2 › CRISPR-associated endonuclease Cas1, N-terminal domain 0.58 46.0 3.93e-01 100.0% 50.0%
3fm8D03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.58 49.0 3.80e-01 100.0% 70.4%
3ll3B01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.58 48.0 3.09e-01 100.0% 29.0%
6j9eJ00 3.30.160.560 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.58 46.0 4.21e-01 97.7% 86.4%
1jlcB03 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.58 41.0 3.00e-01 77.3% 30.8%
2fblB00 2.40.320.10 Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 0.58 50.0 3.48e-01 100.0% 34.5%
2w40A01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.58 47.0 3.06e-01 100.0% 94.5%
2itmA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.58 49.0 3.11e-01 100.0% 29.9%
1bu6O01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.58 48.0 3.07e-01 100.0% 29.5%
4bc3A01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.58 48.0 2.94e-01 100.0% 26.9%
3ulbA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.57 46.0 3.89e-01 97.7% 83.1%
1p5tA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.57 47.0 3.69e-01 100.0% 65.1%
2f9wA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.57 43.0 3.33e-01 97.7% 38.2%
2ar5A00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.57 46.0 3.52e-01 97.7% 74.4%
1mgtA01 3.30.160.70 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Methylated DNA-protein cysteine methyltransferase domain 0.56 45.0 3.79e-01 100.0% 68.2%
2j7qA00 3.90.70.120 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.56 46.0 3.00e-01 100.0% 24.2%
4gxbA03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 49.0 3.69e-01 100.0% 65.4%
1yy3A02 2.40.10.240 Mainly Beta › Beta Barrel › Thrombin, subunit H › QueA-like 0.55 44.0 3.54e-01 95.5% 98.0%
2kgtA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.55 41.0 3.62e-01 95.5% 52.8%
3p0cA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.55 43.0 3.35e-01 93.2% 75.7%
1ejfA00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 41.0 3.36e-01 100.0% 89.1%
3picA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.54 44.0 2.66e-01 100.0% 30.7%
2lccA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.54 38.0 3.28e-01 77.3% 50.0%
1h7sA01 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.54 41.0 2.91e-01 100.0% 72.5%
2qrdB01 2.20.25.290 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.53 36.0 3.74e-01 70.5% 91.9%
2m2lA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.53 40.0 3.78e-01 100.0% 70.1%
2d9uA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.52 43.0 3.73e-01 100.0% 60.8%
3fewX02 3.30.1310.40 Alpha Beta › 2-Layer Sandwich › Ybab; Chain: A; › 0.51 45.0 3.51e-01 100.0% 84.2%
3mtsA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.51 42.0 3.90e-01 100.0% 72.6%
2zkmX01 2.30.29.240 Mainly Beta › Roll › PH-domain like › 0.51 38.0 2.63e-01 95.5% 33.5%
4ydzA00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.50 41.0 3.06e-01 97.7% 59.3%
ECOD (92)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3608772 2004.1.1.427 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › RHSP, RHS_N 0.70 61.0 3.50e-01 100.0% 10.9%
4517494 2484.1.1.8 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › ROK 0.69 58.0 4.24e-01 100.0% 43.8%
3164021 2.4.1.1 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.68 57.0 4.05e-01 97.7% 31.5%
4961795 2484.1.1.144 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DEDD_Tnp_IS110 0.68 59.0 4.43e-01 100.0% 42.7%
3611838 2004.1.1.427 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › RHSP, RHS_N 0.68 59.0 3.66e-01 100.0% 19.2%
4145578 2484.1.1.48 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MutS_II 0.68 58.0 4.13e-01 100.0% 33.6%
4577571 2484.1.1.48 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MutS_II 0.68 58.0 4.00e-01 100.0% 29.4%
3607901 2004.1.1.427 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › RHSP, RHS_N 0.68 58.0 3.38e-01 100.0% 12.2%
143295 2484.1.1.8 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › ROK 0.68 56.0 4.26e-01 100.0% 52.1%
4134045 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.68 57.0 4.04e-01 100.0% 43.2%
3613596 2004.1.1.427 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › RHSP, RHS_N 0.67 58.0 3.41e-01 100.0% 13.2%
5007378 2.4.1.0 ↗ beta barrels › OB-fold › MOP-like › MOP-like 0.67 57.0 5.30e-01 97.7% 76.4%
5009633 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.67 54.0 4.40e-01 95.5% 46.7%
4495021 3239.1.1.1 ↗ alpha complex topology › Cas1 › Cas1 › Cas1 › Cas_Cas1 0.67 57.0 3.39e-01 100.0% 13.0%
3615649 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 51.0 4.86e-01 90.9% 76.4%
3612337 2004.1.1.427 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › RHSP, RHS_N 0.66 55.0 3.18e-01 100.0% 13.1%
5049111 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.66 53.0 3.80e-01 93.2% 31.2%
4485089 2484.1.1.8 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › ROK 0.65 54.0 3.82e-01 100.0% 42.0%
3707085 5.1.2.33 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › BNR_3 0.65 51.0 3.30e-01 90.9% 27.3%
3986939 2484.1.1.144 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DEDD_Tnp_IS110 0.65 53.0 3.80e-01 97.7% 31.7%
5004174 2.4.1.0 ↗ beta barrels › OB-fold › MOP-like › MOP-like 0.65 52.0 3.83e-01 97.7% 32.8%
5051613 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.65 51.0 3.72e-01 90.9% 32.2%
140602 2484.1.1.8 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › ROK 0.65 55.0 4.13e-01 100.0% 45.4%
4247937 295.1.1.0 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.65 51.0 3.87e-01 88.6% 37.3%
4998357 2484.1.1.8 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › ROK 0.64 55.0 4.02e-01 100.0% 48.5%
3280385 4.8.1.5 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › LytTR 0.64 51.0 4.85e-01 93.2% 74.5%
4465005 2484.1.1.48 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MutS_II 0.64 54.0 3.85e-01 100.0% 33.6%
4995973 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.64 53.0 3.56e-01 100.0% 34.2%
4979515 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.64 53.0 3.79e-01 100.0% 43.3%
4183381 2484.1.1.8 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › ROK 0.64 54.0 4.26e-01 100.0% 61.0%
4350350 2484.1.1.48 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MutS_II 0.64 54.0 3.80e-01 100.0% 32.4%
4311788 2.4.1.12 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE_3+CysA_C_terminal 0.64 53.0 3.95e-01 97.7% 36.5%
5017154 295.1.1.0 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.64 53.0 3.86e-01 100.0% 91.1%
4263140 325.1.7.0 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.63 56.0 4.78e-01 100.0% 68.6%
4008035 223.1.1.112 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PF30417 0.63 45.0 2.81e-01 90.9% 12.7%
4963443 5.1.10.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed 0.63 42.0 3.35e-01 70.5% 69.5%
4561720 2484.1.1.37 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Pan_kinase 0.63 55.0 4.05e-01 100.0% 69.2%
3606615 241.10.1.0 ↗ a+b two layers › Type III secretory system chaperone-like › GAS2 domain › GAS2 domain 0.63 51.0 4.11e-01 93.2% 67.8%
4346702 3239.1.1.1 ↗ alpha complex topology › Cas1 › Cas1 › Cas1 › Cas_Cas1 0.62 53.0 3.20e-01 100.0% 13.6%
4300532 2484.1.1.48 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MutS_II 0.62 52.0 3.78e-01 100.0% 37.8%
2971782 2484.1.1.39 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Fumble 0.62 51.0 3.92e-01 100.0% 52.6%
4869677 4967.1.1.30 ↗ alpha bundles › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › RVT_connect 0.62 45.0 4.44e-01 84.1% 84.0%
4513290 2484.1.1.48 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MutS_II 0.62 51.0 3.61e-01 100.0% 31.0%
3948565 2484.1.1.8 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › ROK 0.62 51.0 4.02e-01 100.0% 58.1%
5001282 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.62 52.0 3.68e-01 100.0% 65.5%
1348622 6150.1.1.1 ↗ a+b two layers › hypotheical protein Lreu_0056 › hypotheical protein Lreu_0056 › hypotheical protein Lreu_0056 › Lreu_0056_like 0.61 53.0 3.91e-01 100.0% 77.3%
5044594 809.2.1.0 ↗ a+b two layers › BLIP-like › BT0923-like › BT0923-like 0.61 50.0 4.16e-01 100.0% 70.0%
3946848 2484.1.1.144 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DEDD_Tnp_IS110 0.61 50.0 3.90e-01 100.0% 42.7%
3604159 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.61 51.0 3.94e-01 100.0% 42.6%
5051542 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.61 51.0 3.41e-01 97.7% 63.2%
3504193 220.1.1.49 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Carm_PH 0.61 50.0 3.70e-01 100.0% 60.0%
4116094 2484.1.1.37 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Pan_kinase 0.61 49.0 3.81e-01 100.0% 47.0%
4587696 2.4.1.0 ↗ beta barrels › OB-fold › MOP-like › MOP-like 0.60 50.0 3.95e-01 97.7% 43.0%
4110965 2484.1.1.37 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Pan_kinase 0.60 52.0 3.72e-01 100.0% 42.9%
3510425 220.1.1.66 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH 0.60 49.0 3.44e-01 95.5% 31.6%
5074297 2484.1.1.6 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FGGY_N 0.60 51.0 3.27e-01 100.0% 95.9%
4189328 2484.1.1.37 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Pan_kinase 0.60 50.0 3.70e-01 100.0% 60.0%
1949795 2484.1.1.11 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Ribosomal_L18p 0.60 46.0 3.79e-01 93.2% 92.6%
5053495 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.60 47.0 3.27e-01 90.9% 25.6%
4438024 2484.1.1.7 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Ribosomal_S11 0.60 48.0 3.65e-01 100.0% 75.0%
4948242 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.59 45.0 3.17e-01 86.4% 26.0%
1187847 2484.1.1.21 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › BcrAD_BadFG 0.59 48.0 3.36e-01 100.0% 67.6%
5830 330.7.1.1 ↗ a+b two layers › dsRBD-like › PI-Pfui intein middle domain › PI-Pfui intein middle domain › DUF905 0.59 47.0 4.30e-01 97.7% 75.8%
3710553 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.58 48.0 3.52e-01 100.0% 69.6%
4938919 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 46.0 4.14e-01 93.2% 63.1%
3944443 2484.1.1.21 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › BcrAD_BadFG 0.58 46.0 3.00e-01 100.0% 45.5%
5035742 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 45.0 4.17e-01 93.2% 66.7%
3758614 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.58 48.0 2.60e-01 100.0% 14.9%
5033617 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.58 46.0 3.46e-01 93.2% 33.6%
3895519 2484.8.1.2 ↗ mixed a+b and a/b › Ribonuclease H-like › Separase pseudo-protease domain (PPD) › Separase pseudo-protease domain (PPD) › CHAT 0.57 48.0 3.15e-01 100.0% 51.4%
3603768 2484.1.1.24 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.57 48.0 3.47e-01 100.0% 41.4%
3511436 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.57 48.0 2.99e-01 100.0% 30.2%
3295513 2484.1.1.6 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FGGY_N 0.57 47.0 3.02e-01 100.0% 35.1%
3215391 304.9.1.25 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_7 0.57 47.0 3.29e-01 100.0% 50.9%
5008603 223.1.1.2 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS 0.57 44.0 2.96e-01 88.6% 22.6%
3208295 2.1.1.15 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.57 48.0 3.53e-01 100.0% 58.5%
4169299 7502.1.1.1 ↗ a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon 0.57 43.0 3.46e-01 95.5% 91.7%
3800494 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.56 42.0 3.22e-01 95.5% 37.3%
3325372 3156.1.1.1 ↗ beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related › COX2 0.56 47.0 3.70e-01 100.0% 64.0%
3508680 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.56 42.0 3.47e-01 95.5% 50.5%
5019105 2484.1.1.339 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › acVLRF1 0.56 43.0 3.31e-01 100.0% 60.2%
4666485 2.1.1.15 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.56 46.0 3.60e-01 97.7% 74.3%
4000383 223.2.1.19 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Intu_longin_1 0.55 43.0 3.02e-01 93.2% 58.9%
3966083 2484.1.1.37 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Pan_kinase 0.55 41.0 3.36e-01 100.0% 43.5%
5060242 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.55 44.0 3.55e-01 100.0% 59.0%
3834374 304.48.1.0 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like 0.54 39.0 2.34e-01 84.1% 33.0%
5018514 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.53 42.0 3.17e-01 100.0% 70.4%
3928706 223.2.1.19 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Intu_longin_1 0.53 42.0 2.98e-01 93.2% 29.1%
1545847 5.1.4.50 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › DUF4623 0.53 41.0 2.52e-01 90.9% 23.1%
3213307 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.53 45.0 3.03e-01 100.0% 31.9%
3783021 719.1.1.2 ↗ beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain › XLF 0.52 38.0 3.06e-01 93.2% 63.3%
2426538 375.1.1.26 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 0.52 36.0 2.70e-01 72.7% 28.1%