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MT498058.1__QKY79947.1__SEA_CLAWZ_35__00035

Bact-Vir

MT498058.1__QKY79947.1__SEA_CLAWZ_35__00035

Identity

Accession:
MT498058 ↗
Kingdom:
phage

Quality

84.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Clawzvirus› Gordonia_phage_Clawz

TaxID: 2743910

Cluster

View cluster (5 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 15-95
PDB
Domain cluster: rep: NC_029093.1__YP_009225423.1__SEA_MINDY_138__00136__D46-108
CATH (38)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5j3tA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.63 49.0 4.30e-01 86.4% 67.5%
2dtcA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.61 48.0 4.33e-01 87.7% 81.9%
3wyfE00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.59 48.0 4.01e-01 88.9% 59.2%
1wi1A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.59 47.0 4.30e-01 88.9% 78.4%
1y96D00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.59 44.0 4.42e-01 92.6% 78.3%
1tj6A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.58 47.0 4.25e-01 90.1% 81.7%
2ec1A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.58 45.0 4.05e-01 86.4% 80.5%
3n7cA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.58 46.0 4.22e-01 87.7% 81.5%
2rhiA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.56 41.0 3.72e-01 100.0% 56.2%
3pp2A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 46.0 4.19e-01 92.6% 85.7%
5gviA01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.55 44.0 2.96e-01 86.4% 29.5%
2yeqA01 2.60.40.380 Mainly Beta › Sandwich › Immunoglobulin-like › Purple acid phosphatase-like, N-terminal 0.55 43.0 3.87e-01 88.9% 61.5%
3cp7B02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.55 40.0 3.76e-01 98.8% 61.9%
4qqgG00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.54 41.0 4.30e-01 92.6% 93.1%
5m59A06 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.54 45.0 4.00e-01 88.9% 87.5%
2cztA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.54 47.0 3.85e-01 100.0% 76.8%
2o62A02 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.54 43.0 3.70e-01 90.1% 97.1%
5kfzA04 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.54 45.0 3.96e-01 93.8% 68.3%
4fk5A02 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.53 42.0 2.89e-01 87.7% 35.5%
5dcaA08 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.53 44.0 3.95e-01 88.9% 90.0%
2xc8A00 2.60.40.2980 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 37.0 3.29e-01 92.6% 48.8%
4jysB00 3.10.50.40 Alpha Beta › Roll › Chitinase A; domain 3 › 0.53 43.0 3.87e-01 91.4% 78.9%
1pgl100 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.52 45.0 3.45e-01 93.8% 71.9%
1vwxT01 2.30.30.70 Mainly Beta › Roll › SH3 type barrels. › Ribosomal protein L21 0.52 40.0 3.80e-01 90.1% 69.1%
1h2cA00 2.70.20.20 Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Matrix protein VP40, N-terminal domain 0.52 42.0 3.66e-01 87.7% 91.9%
4z48A00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.52 43.0 3.19e-01 95.1% 89.6%
1wczA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.52 36.0 3.24e-01 88.9% 51.3%
3i3tA00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.52 44.0 2.96e-01 92.6% 38.0%
2h6uA00 2.60.40.180 Mainly Beta › Sandwich › Immunoglobulin-like › Transthyretin/hydroxyisourate hydrolase domain 0.52 44.0 3.96e-01 100.0% 67.5%
4d8mA03 2.100.10.40 Mainly Beta › Aligned Prism › Vitelline Membrane Outer Layer Protein I, subunit A › 0.51 43.0 3.22e-01 92.6% 41.2%
2xtlA02 2.60.40.1140 Mainly Beta › Sandwich › Immunoglobulin-like › Collagen-binding surface protein Cna, B-type domain 0.51 38.0 3.58e-01 90.1% 65.7%
3sd2A01 2.60.40.3080 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 39.0 4.06e-01 100.0% 88.3%
2lccA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.51 40.0 4.10e-01 95.1% 93.4%
2df7A02 2.60.120.660 Mainly Beta › Sandwich › Jelly Rolls › icosahedral virus 0.50 42.0 3.57e-01 93.8% 75.0%
4hsaF02 2.60.40.2150 Mainly Beta › Sandwich › Immunoglobulin-like › Interleukin-17 receptor A/B, fibronectin-III-like domain 2 0.50 45.0 4.16e-01 100.0% 85.7%
4hwxA00 3.30.350.10 Alpha Beta › 2-Layer Sandwich › Subtilisin Inhibitor › Subtilisin inhibitor-like 0.50 41.0 3.66e-01 87.7% 76.3%
5b71E00 2.60.40.1930 Mainly Beta › Sandwich › Immunoglobulin-like › Macroglobulin (MG2) domain 0.50 41.0 3.98e-01 88.9% 86.0%
1cidA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.50 44.0 4.08e-01 100.0% 75.5%
ECOD (57)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3466470 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.68 53.0 4.61e-01 86.4% 71.5%
4024274 4.1.1.17 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 0.63 51.0 4.69e-01 92.6% 67.6%
3222614 220.1.1.158 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_LRR1 0.63 50.0 4.52e-01 87.7% 80.9%
3424637 4.1.1.313 ↗ beta barrels › SH3 › SH3 › SH3 › DUF7912 0.63 53.0 5.06e-01 92.6% 94.7%
4936914 4.11.1.0 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.61 48.0 4.40e-01 96.3% 64.8%
4272564 4.1.1.17 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 0.61 49.0 4.46e-01 92.6% 65.7%
3738626 4.1.1.17 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 0.61 53.0 4.46e-01 100.0% 78.6%
946 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.60 48.0 4.01e-01 88.9% 63.3%
3810742 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.60 49.0 3.98e-01 90.1% 56.1%
4596087 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.59 48.0 4.95e-01 91.4% 94.7%
3459099 4.1.1.158 ↗ beta barrels › SH3 › SH3 › SH3 › DUF3444 0.58 51.0 4.73e-01 100.0% 94.3%
4102120 220.1.1.190 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PF26660 0.58 46.0 4.13e-01 88.9% 79.2%
3480327 220.1.1.4 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Ran_BP1 0.58 46.0 4.03e-01 87.7% 83.2%
3701144 284.1.1.0 ↗ a+b two layers › FKBP-like › FKBP-like › FKBP-like 0.58 49.0 4.72e-01 91.4% 83.3%
3633294 219.1.1.93 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › DUF6540 0.58 48.0 4.08e-01 93.8% 91.3%
4260242 71.1.1.2 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA 0.58 47.0 3.68e-01 91.4% 82.2%
3719860 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 49.0 4.44e-01 96.3% 68.7%
3283097 4.31.1.1 ↗ beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.57 46.0 4.19e-01 95.1% 66.4%
3720028 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.57 43.0 3.98e-01 86.4% 78.3%
2755606 4.1.1.17 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 0.56 50.0 3.64e-01 100.0% 57.0%
3718060 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.56 45.0 4.06e-01 88.9% 78.3%
3795297 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.56 43.0 3.94e-01 86.4% 78.1%
4572123 71.1.1.2 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA 0.56 47.0 3.61e-01 93.8% 82.6%
3668083 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.56 48.0 3.82e-01 96.3% 76.4%
3406310 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 46.0 4.08e-01 100.0% 62.5%
3350896 11.1.4.8 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › Pollen_Ole_e_1 0.55 49.0 4.13e-01 100.0% 59.2%
3632407 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.55 50.0 4.39e-01 100.0% 84.6%
3939070 11.1.1.1173 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7757 0.55 48.0 4.10e-01 93.8% 76.8%
3185321 4.1.1.51 ↗ beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor 0.55 44.0 4.61e-01 96.3% 97.3%
3642325 9.1.1.29 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › BFA1_C 0.55 45.0 3.70e-01 91.4% 90.2%
3279295 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 45.0 4.36e-01 100.0% 80.0%
4251101 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.55 46.0 4.55e-01 96.3% 89.4%
3449012 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.55 42.0 3.91e-01 86.4% 83.6%
3575581 4.1.1.17 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 0.55 47.0 3.84e-01 100.0% 80.0%
3428071 11.1.4.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.55 51.0 4.27e-01 100.0% 66.2%
4607738 4.1.1.17 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 0.54 47.0 4.31e-01 98.8% 89.1%
3275563 304.102.1.1 ↗ a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_2 0.54 48.0 3.34e-01 100.0% 87.4%
3906962 219.1.1.3 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.54 44.0 3.11e-01 86.4% 41.7%
3797539 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 48.0 4.03e-01 100.0% 67.9%
3268160 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.54 45.0 4.40e-01 93.8% 87.8%
165654 4.8.1.6 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.54 42.0 4.37e-01 95.1% 94.6%
4930614 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 44.0 4.49e-01 88.9% 97.5%
3621476 11.1.1.2 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.53 47.0 4.06e-01 100.0% 73.1%
4147907 9.1.1.14 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › CpeS 0.53 42.0 3.60e-01 90.1% 97.1%
4012136 219.1.1.0 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.53 44.0 2.84e-01 92.6% 92.4%
3808051 11.1.4.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.53 48.0 4.14e-01 100.0% 68.8%
5050550 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.52 45.0 4.00e-01 96.3% 67.5%
4950854 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 48.0 4.62e-01 100.0% 91.1%
3515762 4.1.1.303 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_retrovirus 0.52 40.0 4.14e-01 98.8% 90.7%
4968615 11.1.5.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.52 43.0 3.64e-01 90.1% 54.8%
5068217 284.1.1.1 ↗ a+b two layers › FKBP-like › FKBP-like › FKBP-like › FKBP_C 0.51 43.0 4.09e-01 91.4% 98.9%
3188712 4.1.1.225 ↗ beta barrels › SH3 › SH3 › SH3 › DUF7025 0.51 41.0 3.92e-01 88.9% 82.0%
3485620 219.1.1.3 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.51 44.0 2.85e-01 92.6% 35.3%
4987213 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 43.0 4.14e-01 90.1% 100.0%
4985684 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 46.0 4.41e-01 100.0% 85.3%
3932484 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.51 36.0 3.97e-01 87.7% 96.9%
3410335 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.50 37.0 3.55e-01 100.0% 66.3%