←Back to structures
MT499896.1__QMV34182.1__X__00104
Bact-VirMT499896.1__QMV34182.1__X__00104
Identity
- Accession:
- MT499896 ↗
- Kingdom:
- phage
Quality
88.1
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Ackermannviridae›
Kuttervirus›
Salmonella_phage_vB_SentM_sal1
TaxID: 2743964
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 31-87
Domain cluster:
rep: IMGVR_UViG_3300025126_000011-3300025126-Ga0210025_10000661__D28-82
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF22671.2 best | Gp18_domIII_N | 27.7 | 4.10e-06 | 98.2% | 87.9% |
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3foaB01 | 3.40.50.11780 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.95 | 88.0 | 5.66e-01 | 100.0% | 25.5% |
| 3hxlA01 | 3.30.1490.360 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › | 0.74 | 63.0 | 6.06e-01 | 100.0% | 84.4% |
| 3r9pB01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.68 | 59.0 | 4.21e-01 | 100.0% | 33.9% |
| 3khyA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.66 | 56.0 | 3.97e-01 | 100.0% | 31.7% |
| 1zbuB01 | 1.10.720.30 | Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › SAP domain | 0.56 | 39.0 | 3.72e-01 | 77.2% | 89.2% |
| 2aneH00 | 2.30.130.40 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like | 0.56 | 39.0 | 3.29e-01 | 100.0% | 40.4% |
| 5ijaA00 | 3.40.50.1450 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HybD-like | 0.56 | 47.0 | 3.57e-01 | 100.0% | 43.2% |
| 6h21A01 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.53 | 43.0 | 3.11e-01 | 100.0% | 39.7% |
| 8bkdA01 | 3.40.50.850 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Isochorismatase-like | 0.51 | 38.0 | 2.61e-01 | 82.5% | 76.9% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2095487 | 2499.2.1.0 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 | 0.94 | 87.0 | 8.38e-01 | 100.0% | 88.9% |
| 5004680 | 2499.2.1.1 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › Phage_sheath_1 | 0.90 | 81.0 | 5.05e-01 | 100.0% | 20.4% |
| 4995822 | 2499.2.1.1 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › Phage_sheath_1 | 0.89 | 82.0 | 5.19e-01 | 100.0% | 22.4% |
| 1180325 | 2499.2.1.2 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › Phage_sheath_1,Gp18_domIII_N | 0.78 | 66.0 | 5.75e-01 | 100.0% | 62.8% |
| 4950084 | 2011.2.1.4 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › HycI | 0.60 | 51.0 | 3.83e-01 | 100.0% | 37.4% |
| 3520192 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.58 | 48.0 | 3.52e-01 | 100.0% | 34.4% |
| 5006670 | 2011.2.1.0 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like | 0.58 | 49.0 | 3.84e-01 | 100.0% | 43.1% |
| 5036025 | 2011.2.1.4 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › HycI | 0.58 | 49.0 | 3.66e-01 | 100.0% | 35.6% |
| 4214302 | 1.1.9.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg | 0.58 | 41.0 | 2.84e-01 | 100.0% | 20.5% |
| 4028055 | 206.1.1.87 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, RIO1 | 0.57 | 43.0 | 2.67e-01 | 86.0% | 52.5% |
| 1840629 | 2011.2.1.4 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › HycI | 0.56 | 47.0 | 3.57e-01 | 100.0% | 43.2% |
| 4977496 | 2011.2.1.4 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › HycI | 0.55 | 47.0 | 3.52e-01 | 100.0% | 37.3% |
| 5080732 | 2011.2.1.4 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › HycI | 0.55 | 46.0 | 3.49e-01 | 100.0% | 41.6% |
| 3810687 | 2005.1.1.43 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CHX17_2nd | 0.53 | 38.0 | 2.84e-01 | 80.7% | 77.1% |
| 3354360 | 2005.1.1.43 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CHX17_2nd | 0.53 | 44.0 | 3.31e-01 | 100.0% | 38.1% |
| 3833696 | 2005.1.1.43 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CHX17_2nd | 0.52 | 44.0 | 3.21e-01 | 100.0% | 33.1% |
| 4162716 | 219.1.1.81 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › MINDY-3_4_CD | 0.52 | 42.0 | 2.64e-01 | 91.2% | 35.5% |
| 5068385 | 2011.2.1.0 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like | 0.51 | 44.0 | 3.50e-01 | 100.0% | 47.5% |
D2
high
residues 182-258
Domain cluster:
representative
CATH (49)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4nx9A02 | 2.60.40.4390 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.83 | 76.0 | 6.45e-01 | 100.0% | 74.4% |
| 1el6A03 | 3.90.1160.10 | Alpha Beta › Alpha-Beta Complex › Baseplate Structural Protein Gp11; Chain: A, domain 3 › Baseplate structural protein gp11, finger domain | 0.80 | 72.0 | 6.38e-01 | 100.0% | 83.5% |
| 3mmlF01 | 3.30.1360.40 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.76 | 55.0 | 5.45e-01 | 100.0% | 73.4% |
| 2zfzD00 | 3.30.1360.40 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.74 | 54.0 | 5.43e-01 | 100.0% | 74.7% |
| 1b4bA00 | 3.30.1360.40 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.74 | 54.0 | 5.64e-01 | 100.0% | 83.1% |
| 1xxaC00 | 3.30.1360.40 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.71 | 53.0 | 5.51e-01 | 100.0% | 83.6% |
| 3oreA01 | 3.30.1360.40 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.70 | 55.0 | 5.89e-01 | 100.0% | 97.0% |
| 2phcB01 | 3.30.1360.40 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.69 | 57.0 | 5.57e-01 | 100.0% | 81.9% |
| 3va7A05 | 3.30.1360.40 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.67 | 54.0 | 4.91e-01 | 100.0% | 66.0% |
| 2pulB01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.66 | 46.0 | 4.31e-01 | 94.8% | 59.8% |
| 3t66A01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.65 | 55.0 | 3.79e-01 | 100.0% | 27.8% |
| 3cjsA00 | 3.30.70.1170 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sun protein; domain 3 | 0.65 | 40.0 | 4.47e-01 | 100.0% | 82.8% |
| 3rqtA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.64 | 55.0 | 3.80e-01 | 100.0% | 29.0% |
| 2yilA02 | 3.30.30.180 | Alpha Beta › 2-Layer Sandwich › Defensin A-like › | 0.63 | 37.0 | 4.32e-01 | 88.3% | 86.3% |
| 3fjsC00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.63 | 34.0 | 3.10e-01 | 96.1% | 36.4% |
| 1uqwA02 | 3.90.76.10 | Alpha Beta › Alpha-Beta Complex › Dipeptide-binding Protein; domain 1 › Dipeptide-binding Protein; Domain 1 | 0.63 | 57.0 | 4.57e-01 | 100.0% | 51.7% |
| 1usmA00 | 3.30.1360.20 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Transcriptional coactivator/pterin dehydratase | 0.62 | 52.0 | 5.23e-01 | 100.0% | 89.6% |
| 5fq0A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.62 | 34.0 | 3.05e-01 | 97.4% | 36.4% |
| 2vbkA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.62 | 42.0 | 2.54e-01 | 98.7% | 10.6% |
| 1ufwA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.62 | 48.0 | 4.54e-01 | 100.0% | 69.5% |
| 2kwaA00 | 3.30.1360.40 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.62 | 56.0 | 5.10e-01 | 100.0% | 82.2% |
| 2zueA01 | 3.30.1360.70 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Arginyl tRNA synthetase N-terminal domain | 0.61 | 52.0 | 4.50e-01 | 90.9% | 84.3% |
| 1vbkA01 | 3.30.70.1510 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › THUMP domain-like | 0.61 | 49.0 | 4.86e-01 | 100.0% | 83.1% |
| 2ebbA00 | 3.30.1360.20 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Transcriptional coactivator/pterin dehydratase | 0.61 | 51.0 | 4.77e-01 | 100.0% | 72.9% |
| 3ssmC02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.61 | 48.0 | 3.48e-01 | 87.0% | 30.8% |
| 1x8bA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.59 | 38.0 | 3.71e-01 | 92.2% | 59.5% |
| 3euoA02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.57 | 40.0 | 3.25e-01 | 74.0% | 87.3% |
| 2wb6A00 | 3.90.1150.90 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › | 0.56 | 44.0 | 3.90e-01 | 87.0% | 80.7% |
| 4lvnP00 | 3.30.70.2380 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 44.0 | 4.36e-01 | 100.0% | 82.7% |
| 3dlcA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.55 | 44.0 | 3.17e-01 | 87.0% | 34.2% |
| 2ltmA00 | 3.30.1370.70 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › Scaffold protein Nfu/NifU, N-terminal domain | 0.55 | 46.0 | 4.15e-01 | 100.0% | 66.4% |
| 2j0wA04 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.55 | 42.0 | 4.31e-01 | 98.7% | 86.7% |
| 1s12A00 | 3.30.70.1490 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cysteine protease Prp | 0.54 | 42.0 | 4.03e-01 | 100.0% | 71.3% |
| 1kgdA02 | 3.30.63.10 | Alpha Beta › 2-Layer Sandwich › Guanylate Kinase phosphate binding domain › Guanylate Kinase phosphate binding domain | 0.53 | 36.0 | 3.99e-01 | 90.9% | 90.0% |
| 7ehgC01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.53 | 38.0 | 3.27e-01 | 100.0% | 45.7% |
| 2y23A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 42.0 | 3.86e-01 | 100.0% | 64.4% |
| 2yx0A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.53 | 42.0 | 2.84e-01 | 89.6% | 28.7% |
| 8k1fC01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.53 | 37.0 | 2.80e-01 | 85.7% | 29.1% |
| 1j5uA01 | 3.55.10.10 | Alpha Beta › 3-Layer(bab) Sandwich › Archease, Possible Chaperone; Chain: A; domain 1 › Archease domain | 0.53 | 39.0 | 3.48e-01 | 80.5% | 98.3% |
| 2hlcA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.53 | 37.0 | 3.37e-01 | 72.7% | 93.3% |
| 3fcgB00 | 2.60.40.3110 | Mainly Beta › Sandwich › Immunoglobulin-like › Outer membrane usher protein | 0.53 | 31.0 | 3.22e-01 | 94.8% | 60.6% |
| 2l01A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 33.0 | 3.38e-01 | 87.0% | 64.9% |
| 5jpnC01 | 2.60.40.690 | Mainly Beta › Sandwich › Immunoglobulin-like › Alpha-macroglobulin, receptor-binding domain | 0.52 | 47.0 | 3.91e-01 | 100.0% | 68.4% |
| 1kjwA03 | 3.30.63.10 | Alpha Beta › 2-Layer Sandwich › Guanylate Kinase phosphate binding domain › Guanylate Kinase phosphate binding domain | 0.51 | 36.0 | 4.01e-01 | 89.6% | 93.4% |
| 7yj5A02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.51 | 39.0 | 3.15e-01 | 83.1% | 60.0% |
| 1z6gA02 | 3.30.63.10 | Alpha Beta › 2-Layer Sandwich › Guanylate Kinase phosphate binding domain › Guanylate Kinase phosphate binding domain | 0.51 | 35.0 | 3.93e-01 | 89.6% | 93.3% |
| 2zzzA02 | 3.30.63.10 | Alpha Beta › 2-Layer Sandwich › Guanylate Kinase phosphate binding domain › Guanylate Kinase phosphate binding domain | 0.51 | 35.0 | 3.90e-01 | 89.6% | 93.3% |
| 3njzA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.50 | 38.0 | 2.49e-01 | 98.7% | 18.1% |
| 5ucoA02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.50 | 38.0 | 3.15e-01 | 84.4% | 60.1% |
ECOD (60)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3166067 | 3019.1.1.7 ↗ | beta sandwiches › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › Phage_sheath_domII | 0.90 | 85.0 | 7.52e-01 | 100.0% | 80.0% |
| 4302659 | 3019.1.1.0 ↗ | beta sandwiches › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain | 0.83 | 76.0 | 6.44e-01 | 100.0% | 78.3% |
| 270234 | 3019.1.1.2 ↗ | beta sandwiches › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › GP11 | 0.80 | 72.0 | 6.47e-01 | 100.0% | 86.7% |
| 3164975 | 306.6.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › PH0987 N-terminal domain-like › PH0987 N-terminal domain-like › CT_C_D | 0.74 | 57.0 | 5.78e-01 | 100.0% | 82.7% |
| 5008417 | 873.1.1.0 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain | 0.72 | 46.0 | 3.86e-01 | 90.9% | 40.0% |
| 3839595 | 3019.1.1.1 ↗ | beta sandwiches › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › Flagellin_IN | 0.69 | 61.0 | 5.45e-01 | 100.0% | 83.6% |
| 4865066 | 11.1.5.27 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › A2M_recep | 0.69 | 44.0 | 4.32e-01 | 97.4% | 60.2% |
| 3616501 | 310.1.1.2 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain › Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain › Arg_tRNA_synt_N | 0.68 | 53.0 | 4.69e-01 | 89.6% | 58.2% |
| 4990565 | 304.115.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in DAHP synthase › Ferredoxin-like domain in DAHP synthase | 0.68 | 42.0 | 4.92e-01 | 96.1% | 89.1% |
| 5057765 | 4955.1.1.0 ↗ | a+b two layers › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit | 0.66 | 50.0 | 4.98e-01 | 100.0% | 77.5% |
| 1179696 | 304.138.1.0 ↗ | a+b two layers › Alpha-beta plaits | 0.66 | 41.0 | 4.35e-01 | 100.0% | 71.6% |
| 3512130 | 246.3.1.4 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like › Exo_endo_phos2 | 0.65 | 49.0 | 2.96e-01 | 100.0% | 13.0% |
| 4307366 | 3019.1.1.0 ↗ | beta sandwiches › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain | 0.64 | 57.0 | 5.09e-01 | 100.0% | 78.2% |
| 4645469 | 310.1.1.2 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain › Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain › Arg_tRNA_synt_N | 0.64 | 53.0 | 4.68e-01 | 90.9% | 88.7% |
| 1921561 | 1110.1.1.0 ↗ | beta sandwiches › Flagellar hook subunit protein FlgE beta sandwich domain › Flagellar hook subunit protein FlgE beta sandwich domain › Flagellar hook subunit protein FlgE beta sandwich domain | 0.64 | 56.0 | 4.46e-01 | 100.0% | 68.1% |
| 5083546 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.64 | 49.0 | 4.88e-01 | 100.0% | 78.8% |
| 4284794 | 3019.1.1.1 ↗ | beta sandwiches › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › Flagellin_IN | 0.64 | 56.0 | 4.95e-01 | 100.0% | 80.9% |
| 3016795 | 304.136.1.1 ↗ | a+b two layers › Alpha-beta plaits › Oligo-peptide binding protein (OPPA) insertion domain › Oligo-peptide binding protein (OPPA) insertion domain › SBP_bac_5 | 0.64 | 56.0 | 5.11e-01 | 100.0% | 72.8% |
| 4141551 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.63 | 54.0 | 3.15e-01 | 92.2% | 81.2% |
| 3964348 | 304.28.1.3 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › SecD-TM1 | 0.63 | 50.0 | 5.10e-01 | 100.0% | 88.0% |
| None | — | 0.63 | 53.0 | 3.12e-01 | 92.2% | 87.1% | |
| 3257478 | 3156.1.1.27 ↗ | beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related › PF26737 | 0.62 | 43.0 | 4.18e-01 | 98.7% | 64.7% |
| 3969148 | 305.2.1.1 ↗ | a+b two layers › DCoH-like › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › Pterin_4a | 0.62 | 52.0 | 4.65e-01 | 100.0% | 65.7% |
| 4970301 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.62 | 44.0 | 4.33e-01 | 100.0% | 68.2% |
| 5037590 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.62 | 42.0 | 4.27e-01 | 97.4% | 72.0% |
| 1889992 | 1110.1.1.1 ↗ | beta sandwiches › Flagellar hook subunit protein FlgE beta sandwich domain › Flagellar hook subunit protein FlgE beta sandwich domain › Flagellar hook subunit protein FlgE beta sandwich domain › Flagellin_IN | 0.62 | 54.0 | 4.17e-01 | 98.7% | 58.9% |
| 3688333 | 306.6.1.0 ↗ | a+b two layers › Glucose permease domain IIB-like › PH0987 N-terminal domain-like › PH0987 N-terminal domain-like | 0.62 | 56.0 | 4.98e-01 | 100.0% | 71.4% |
| 3602777 | 140.1.1.0 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0.62 | 52.0 | 3.10e-01 | 92.2% | 86.4% |
| 4519579 | 310.1.1.2 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain › Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain › Arg_tRNA_synt_N | 0.61 | 51.0 | 4.47e-01 | 90.9% | 87.0% |
| 4077673 | 310.1.1.2 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain › Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain › Arg_tRNA_synt_N | 0.61 | 52.0 | 4.68e-01 | 92.2% | 89.5% |
| 3639504 | 305.2.1.1 ↗ | a+b two layers › DCoH-like › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › Pterin_4a | 0.61 | 51.0 | 4.51e-01 | 100.0% | 63.6% |
| 4978049 | 310.1.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain › Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain | 0.61 | 50.0 | 4.76e-01 | 88.3% | 98.9% |
| 4401105 | 304.138.1.0 ↗ | a+b two layers › Alpha-beta plaits | 0.61 | 39.0 | 4.45e-01 | 98.7% | 92.7% |
| 3749773 | 304.9.1.17 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › DUF1866 | 0.60 | 47.0 | 4.31e-01 | 100.0% | 62.9% |
| 4403433 | 11.1.1.11 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Usher | 0.60 | 39.0 | 4.07e-01 | 100.0% | 72.9% |
| 4127140 | 310.1.1.2 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain › Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain › Arg_tRNA_synt_N | 0.60 | 49.0 | 4.51e-01 | 89.6% | 85.0% |
| 3968877 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.59 | 43.0 | 4.37e-01 | 98.7% | 78.7% |
| 3258084 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.59 | 45.0 | 4.60e-01 | 100.0% | 85.3% |
| 4995389 | 304.24.1.5 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › Trm5_N | 0.58 | 37.0 | 3.99e-01 | 100.0% | 76.9% |
| 5056980 | 304.24.1.5 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › Trm5_N | 0.58 | 36.0 | 3.95e-01 | 97.4% | 80.0% |
| 5060543 | 2002.1.1.414 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Wyosine_form | 0.56 | 41.0 | 2.73e-01 | 85.7% | 19.0% |
| 3194622 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.56 | 44.0 | 4.08e-01 | 100.0% | 68.4% |
| 5261 | 304.8.1.2 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT | 0.56 | 43.0 | 4.16e-01 | 100.0% | 72.5% |
| 4995824 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.55 | 42.0 | 4.36e-01 | 98.7% | 84.9% |
| 4243497 | 7581.1.1.20 ↗ | a/b three-layered sandwiches › Thiolase-like › Thiolase-like › Thiolase-like › Chal_sti_synt_N+Chal_sti_synt_C | 0.55 | 41.0 | 2.98e-01 | 80.5% | 91.3% |
| 4946823 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.55 | 37.0 | 3.77e-01 | 93.5% | 70.7% |
| 5010610 | 2002.1.1.414 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Wyosine_form | 0.55 | 40.0 | 2.64e-01 | 85.7% | 17.6% |
| 3712406 | 2004.1.1.50 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Guanylate_kin | 0.54 | 37.0 | 2.75e-01 | 72.7% | 84.9% |
| 4062874 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.53 | 35.0 | 2.64e-01 | 89.6% | 27.9% |
| 5038827 | 2002.1.1.414 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Wyosine_form | 0.52 | 41.0 | 2.78e-01 | 88.3% | 28.4% |
| 5076473 | 2002.1.1.414 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Wyosine_form | 0.52 | 40.0 | 2.75e-01 | 85.7% | 28.6% |
| 4970918 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.52 | 41.0 | 2.75e-01 | 88.3% | 31.6% |
| 4017595 | 306.10.1.6 ↗ | a+b two layers › Glucose permease domain IIB-like › H1 domain of KCTD12 › H1 domain of KCTD12 › PF28980 | 0.52 | 45.0 | 3.92e-01 | 100.0% | 70.4% |
| 4281973 | 7581.1.1.26 ↗ | a/b three-layered sandwiches › Thiolase-like › Thiolase-like › Thiolase-like › Chal_sti_synt_N, Chal_sti_synt_C, ACP_syn_III | 0.52 | 42.0 | 2.73e-01 | 90.9% | 55.4% |
| 5000271 | 2002.1.1.414 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Wyosine_form | 0.52 | 40.0 | 2.76e-01 | 88.3% | 28.0% |
| 3623496 | 2004.1.1.50 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Guanylate_kin | 0.51 | 36.0 | 2.66e-01 | 92.2% | 27.8% |
| 2806794 | 11.1.5.27 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › A2M_recep | 0.51 | 46.0 | 3.85e-01 | 100.0% | 66.9% |
| 3482144 | 2004.1.1.50 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Guanylate_kin | 0.51 | 36.0 | 2.67e-01 | 90.9% | 27.6% |
| 3666312 | 387.1.5.0 ↗ | few secondary structure elements › omega toxin-like › omega toxin-related › Scorpion toxin-like | 0.51 | 34.0 | 3.81e-01 | 92.2% | 93.2% |
| 3512685 | 101.1.2.68 ↗ | alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc34 | 0.50 | 36.0 | 3.02e-01 | 87.0% | 42.4% |