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MT500539.1__QLF85364.1__STSR3_80__00080
Bact-VirMT500539.1__QLF85364.1__STSR3_80__00080
Identity
- Accession:
- MT500539 ↗
- Kingdom:
- phage
Quality
80.1
mean pLDDT
Taxonomy
TaxID: 2743845
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 19-94
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08813.18 best | Phage_tail_3 | 80.5 | 1.60e-22 | 100.0% | 44.9% |
CATH (38)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2aq6A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.66 | 59.0 | 4.80e-01 | 100.0% | 71.3% |
| 1wv4B00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.64 | 51.0 | 4.11e-01 | 100.0% | 43.5% |
| 2i51B00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.64 | 56.0 | 4.25e-01 | 100.0% | 59.2% |
| 5escA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.64 | 55.0 | 4.83e-01 | 100.0% | 67.2% |
| 3bpkA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.63 | 55.0 | 4.24e-01 | 100.0% | 66.5% |
| 2ou5A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.63 | 54.0 | 4.23e-01 | 100.0% | 55.4% |
| 4h61A00 | 3.10.450.580 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Mediator complex, subunit Med6 | 0.62 | 39.0 | 3.27e-01 | 86.8% | 35.0% |
| 3dmbA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.62 | 54.0 | 4.46e-01 | 100.0% | 59.6% |
| 2hq7B00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.62 | 54.0 | 4.48e-01 | 100.0% | 59.2% |
| 4kktA02 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.62 | 47.0 | 4.27e-01 | 97.4% | 60.0% |
| 2re7A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.62 | 53.0 | 4.53e-01 | 100.0% | 65.2% |
| 2htdB00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.61 | 51.0 | 4.47e-01 | 97.4% | 59.7% |
| 2nvmA00 | 3.30.310.110 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › XisI-like | 0.61 | 33.0 | 2.96e-01 | 75.0% | 37.5% |
| 2i02A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.61 | 53.0 | 4.41e-01 | 100.0% | 60.7% |
| 3ec6A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.61 | 53.0 | 4.54e-01 | 100.0% | 65.6% |
| 2qeaB00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.60 | 51.0 | 4.16e-01 | 100.0% | 55.1% |
| 3bp6B02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 38.0 | 3.65e-01 | 100.0% | 55.7% |
| 1l0wA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.59 | 46.0 | 4.15e-01 | 85.5% | 88.7% |
| 2vl6A02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.58 | 46.0 | 4.00e-01 | 84.2% | 96.4% |
| 4hh2B03 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.58 | 48.0 | 4.43e-01 | 93.4% | 98.0% |
| 2htiA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.57 | 50.0 | 4.30e-01 | 100.0% | 65.9% |
| 4binA01 | 2.60.40.3500 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 46.0 | 4.04e-01 | 90.8% | 84.5% |
| 1p97A00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.56 | 49.0 | 4.33e-01 | 98.7% | 93.9% |
| 1in0A02 | 3.30.70.990 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › YajQ-like, domain 2 | 0.56 | 39.0 | 3.64e-01 | 89.5% | 59.8% |
| 2joqA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.55 | 38.0 | 3.88e-01 | 97.4% | 73.3% |
| 3n54B03 | 3.30.300.210 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › Nutrient germinant receptor protein C, domain 3 | 0.55 | 41.0 | 3.39e-01 | 86.8% | 43.4% |
| 2yh6D00 | 3.30.530.50 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › | 0.55 | 47.0 | 4.17e-01 | 97.4% | 84.5% |
| 2dchX02 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.54 | 37.0 | 3.31e-01 | 100.0% | 48.6% |
| 3wdoA02 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 34.0 | 3.64e-01 | 96.1% | 78.7% |
| 6toaF01 | 3.30.2000.30 | Alpha Beta › 2-Layer Sandwich › STM4215-like › | 0.54 | 43.0 | 3.67e-01 | 93.4% | 52.3% |
| 2zbbA02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.54 | 44.0 | 4.33e-01 | 89.5% | 96.3% |
| 4dj3B02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.54 | 47.0 | 3.78e-01 | 100.0% | 76.0% |
| 2hzmG01 | 3.30.310.180 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › | 0.53 | 45.0 | 3.95e-01 | 97.4% | 62.6% |
| 3mgjA00 | 3.30.70.2690 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › LOR/SDH bifunctional enzyme, conserved domain | 0.53 | 38.0 | 3.57e-01 | 98.7% | 61.5% |
| 2nlvA00 | 3.30.310.110 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › XisI-like | 0.51 | 31.0 | 2.79e-01 | 86.8% | 38.4% |
| 4m4xA00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.50 | 41.0 | 3.61e-01 | 96.1% | 86.5% |
| 2ei0A02 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.50 | 33.0 | 2.72e-01 | 92.1% | 32.9% |
| 2y3uA02 | 3.30.980.50 | Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › | 0.50 | 38.0 | 3.43e-01 | 93.4% | 57.5% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3976188 | 1.1.13.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tube | 0.72 | 65.0 | 5.03e-01 | 100.0% | 50.3% |
| 4974640 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.69 | 60.0 | 5.00e-01 | 100.0% | 61.9% |
| 4349207 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.67 | 55.0 | 4.49e-01 | 100.0% | 47.7% |
| 5013200 | 1.1.5.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N | 0.62 | 54.0 | 4.49e-01 | 100.0% | 67.1% |
| 6661 | 4276.1.1.1 ↗ | a+b two layers › XisI-like › XisI-like › XisI-like › XisI | 0.61 | 33.0 | 2.96e-01 | 75.0% | 37.5% |
| 3661102 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.59 | 34.0 | 3.80e-01 | 89.5% | 76.4% |
| 3839019 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.56 | 46.0 | 3.09e-01 | 93.4% | 29.5% |
| 3515433 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.55 | 30.0 | 3.18e-01 | 73.7% | 56.9% |
| 3222311 | 223.1.1.29 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_11 | 0.54 | 46.0 | 4.01e-01 | 93.4% | 87.8% |
| 3473111 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.54 | 38.0 | 2.40e-01 | 100.0% | 12.1% |
| 3425820 | 7579.1.1.44 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_6 | 0.54 | 37.0 | 2.40e-01 | 71.1% | 26.4% |
| 5018913 | 223.1.1.14 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 | 0.54 | 45.0 | 3.87e-01 | 93.4% | 85.0% |
| 3426315 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.53 | 39.0 | 3.74e-01 | 93.4% | 66.7% |
| 2137378 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.53 | 44.0 | 4.11e-01 | 93.4% | 89.7% |
| 4996826 | 223.1.1.2 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS | 0.53 | 45.0 | 2.75e-01 | 98.7% | 18.5% |
| 4634707 | 327.16.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › Secretin | 0.52 | 37.0 | 2.69e-01 | 76.3% | 94.7% |
| 3598638 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.52 | 45.0 | 3.82e-01 | 98.7% | 93.1% |
| 4329048 | 223.1.1.14 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 | 0.52 | 43.0 | 3.64e-01 | 97.4% | 74.3% |
| 4029682 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.51 | 42.0 | 3.23e-01 | 92.1% | 85.9% |
| 4962396 | 223.1.1.14 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 | 0.50 | 42.0 | 3.73e-01 | 92.1% | 83.6% |