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MT500540.1__QKW95431.1__X__00010

Bact-Vir

MT500540.1__QKW95431.1__X__00010

Identity

Accession:
MT500540 ↗
Kingdom:
phage

Quality

73.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Slepowronvirus› Listeria_phage_LP-HM00113468

TaxID: 2744802

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-67
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2glzA00 3.30.1330.130 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › 0.55 41.0 3.29e-01 84.6% 78.5%
6eb0A02 2.40.110.10 Mainly Beta › Beta Barrel › Butyryl-CoA Dehydrogenase, subunit A; domain 2 › Butyryl-CoA Dehydrogenase, subunit A, domain 2 0.52 41.0 3.33e-01 92.3% 87.9%
2rjbA00 3.10.180.80 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › Uncharacterised protein PF07063, DUF1338 0.51 39.0 2.51e-01 90.8% 64.1%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3405293 375.1.1.245 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › BRI3 0.65 41.0 4.70e-01 75.4% 95.3%
5000445 2006.1.3.2 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim 0.58 45.0 3.44e-01 87.7% 81.8%
3598822 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.53 37.0 3.40e-01 72.3% 89.4%
3956313 268.1.1.0 ↗ a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related 0.52 35.0 2.90e-01 70.8% 91.2%
5006240 268.1.1.1 ↗ a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related › SCP2 0.51 38.0 2.82e-01 84.6% 79.0%