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MT515752.1__QNJ49941.1__PYps15T_216__00216

Bact-Vir

MT515752.1__QNJ49941.1__PYps15T_216__00216

Identity

Accession:
MT515752 ↗
Kingdom:
phage

Quality

74.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pantevenvirales› Straboviridae› Tequatrovirus› Yersinia_phage_PYps15T

TaxID: 2764916

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-39
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00265.25 best TK 21.0 3.60e-04 84.2% 14.2%
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7b0xI01 2.60.40.1090 Mainly Beta › Sandwich › Immunoglobulin-like › Fimbrial-type adhesion domain 0.67 48.0 3.32e-01 78.9% 28.2%
2va0A00 3.30.450.160 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.59 42.0 3.13e-01 76.3% 63.6%
4gr5C01 3.90.820.10 Alpha Beta › Alpha-Beta Complex › Rubredoxin-like › Structural Genomics, Unknown Function 30-nov-00 1gh9 Mol_id 0.52 40.0 3.63e-01 100.0% 70.3%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4675823 377.1.1.3 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › TK 0.76 66.0 5.54e-01 100.0% 60.0%
4074154 377.1.1.3 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › TK 0.73 60.0 5.76e-01 94.7% 82.2%
4355340 377.1.1.0 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.72 62.0 5.56e-01 100.0% 72.7%
3992154 1.1.2.7 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N 0.53 36.0 3.22e-01 71.1% 81.7%