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MT521992.1__QLF83308.1__SEA_NICEHOUSE_64__00064
Bact-VirMT521992.1__QLF83308.1__SEA_NICEHOUSE_64__00064
Identity
- Accession:
- MT521992 ↗
- Kingdom:
- phage
Quality
83.3
mean pLDDT
Taxonomy
TaxID: 2743998
Cluster
View cluster (247 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 50-140
Domain cluster:
representative
CATH (31)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3qzqA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.70 | 39.0 | 4.37e-01 | 89.0% | 71.0% |
| 6ku8A02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.68 | 38.0 | 4.26e-01 | 89.0% | 71.0% |
| 2vxaA00 | 3.30.1660.10 | Alpha Beta › 2-Layer Sandwich › Dodecin subunit-like › Flavin-binding protein dodecin | 0.67 | 44.0 | 5.01e-01 | 80.2% | 92.4% |
| 3onrJ00 | 3.30.1660.10 | Alpha Beta › 2-Layer Sandwich › Dodecin subunit-like › Flavin-binding protein dodecin | 0.64 | 42.0 | 4.76e-01 | 80.2% | 89.7% |
| 3fppA01 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.62 | 42.0 | 4.04e-01 | 90.1% | 61.5% |
| 2kdkA01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.60 | 45.0 | 4.26e-01 | 79.1% | 100.0% |
| 2b02A01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.59 | 42.0 | 4.07e-01 | 74.7% | 100.0% |
| 6ruiB07 | 2.40.50.150 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II, Rpb2 subunit, wall domain | 0.59 | 52.0 | 4.64e-01 | 95.6% | 98.4% |
| 3bpkA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.59 | 51.0 | 4.05e-01 | 93.4% | 61.5% |
| 5svgC00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.58 | 43.0 | 3.96e-01 | 79.1% | 97.5% |
| 2m05A00 | 3.30.1490.140 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Amyloidogenic glycoprotein, copper-binding domain | 0.58 | 40.0 | 4.60e-01 | 87.9% | 100.0% |
| 4f3lA03 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.57 | 48.0 | 4.38e-01 | 91.2% | 92.6% |
| 7pzoA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.57 | 39.0 | 3.86e-01 | 91.2% | 66.7% |
| 2oq5A02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.56 | 38.0 | 3.72e-01 | 91.2% | 61.5% |
| 4f0qD01 | 2.30.280.20 | Mainly Beta › Roll › PUA domain-like › | 0.56 | 48.0 | 3.48e-01 | 94.5% | 46.3% |
| 2fmaA00 | 3.30.1490.140 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Amyloidogenic glycoprotein, copper-binding domain | 0.56 | 35.0 | 4.27e-01 | 75.8% | 100.0% |
| 2rjzA02 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.55 | 39.0 | 3.86e-01 | 91.2% | 68.7% |
| 2j8aA01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.55 | 35.0 | 3.57e-01 | 73.6% | 66.7% |
| 2pmzB07 | 2.40.50.150 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II, Rpb2 subunit, wall domain | 0.54 | 47.0 | 4.24e-01 | 95.6% | 98.4% |
| 4noiA01 | 3.30.1360.10 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit | 0.54 | 38.0 | 3.66e-01 | 91.2% | 65.0% |
| 1wa9A02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.53 | 45.0 | 3.65e-01 | 92.3% | 74.4% |
| 3dfjA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.53 | 38.0 | 3.55e-01 | 91.2% | 60.2% |
| 1go3E02 | 3.30.1490.120 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › RNA polymerase Rpb7-like, N-terminal domain | 0.53 | 38.0 | 4.02e-01 | 76.9% | 85.2% |
| 2f91A02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.52 | 39.0 | 3.64e-01 | 92.3% | 63.7% |
| 5ejlA02 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.52 | 47.0 | 4.22e-01 | 97.8% | 85.5% |
| 2ptfA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.51 | 47.0 | 3.94e-01 | 98.9% | 83.7% |
| 1p97A00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.51 | 46.0 | 4.22e-01 | 96.7% | 98.2% |
| 4hudA01 | 3.30.2000.40 | Alpha Beta › 2-Layer Sandwich › STM4215-like › Myoviridae tail sheath stabiliser | 0.51 | 43.0 | 3.36e-01 | 94.5% | 56.2% |
| 1bdfA01 | 3.30.1360.10 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit | 0.51 | 36.0 | 3.48e-01 | 95.6% | 64.2% |
| 1fiwA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.51 | 38.0 | 3.52e-01 | 91.2% | 61.7% |
| 6r2wH02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.50 | 36.0 | 3.46e-01 | 91.2% | 62.7% |
ECOD (48)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4407090 | 1.1.7.89 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF26002 | 0.63 | 47.0 | 3.95e-01 | 91.2% | 48.3% |
| 3695559 | 325.1.7.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › RNA_pol_Rpb2_6 | 0.63 | 48.0 | 4.26e-01 | 81.3% | 97.7% |
| 3941539 | 1.1.13.40 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_min_tail | 0.63 | 53.0 | 5.11e-01 | 92.3% | 90.5% |
| 3387365 | 872.8.1.0 ↗ | a+b two layers › Dodecin subunit-like › Probable RNA-binding protein N-terminal domain › Probable RNA-binding protein N-terminal domain | 0.62 | 39.0 | 4.50e-01 | 81.3% | 87.7% |
| 3969448 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.62 | 52.0 | 4.96e-01 | 90.1% | 89.5% |
| 3988859 | 1.1.7.91 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25940 | 0.62 | 47.0 | 4.49e-01 | 93.4% | 69.5% |
| 4273561 | 1.1.7.91 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25940 | 0.62 | 48.0 | 4.19e-01 | 95.6% | 55.6% |
| 4929634 | 1.1.5.47 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_tube_2 | 0.62 | 52.0 | 3.70e-01 | 92.3% | 60.4% |
| 3183073 | 1.1.5.10 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct | 0.62 | 54.0 | 3.77e-01 | 93.4% | 43.0% |
| 5033816 | 256.1.1.4 ↗ | a+b two layers › MTH1598-like › MTH1598-like › MTH1598-like › DUF4177 | 0.61 | 41.0 | 4.87e-01 | 84.6% | 98.4% |
| 3784272 | 1.1.7.102 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF28793 | 0.61 | 55.0 | 4.94e-01 | 97.8% | 73.3% |
| 4014778 | 1.1.5.10 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct | 0.61 | 51.0 | 3.75e-01 | 91.2% | 51.1% |
| 3412875 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.59 | 46.0 | 4.36e-01 | 81.3% | 96.2% |
| 4030357 | 1.1.7.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › AARP2CN | 0.59 | 37.0 | 3.80e-01 | 91.2% | 63.3% |
| 5004559 | 1.1.13.75 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › CIS_tube | 0.59 | 48.0 | 4.27e-01 | 91.2% | 83.7% |
| 2642579 | 1.1.13.6 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tail_2 | 0.59 | 50.0 | 4.44e-01 | 93.4% | 77.7% |
| 3938848 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.58 | 40.0 | 4.48e-01 | 94.5% | 92.9% |
| 3646876 | 4.25.1.0 ↗ | beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain | 0.58 | 40.0 | 3.98e-01 | 71.4% | 77.9% |
| 4513514 | 325.1.7.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › RNA_pol_Rpb2_6 | 0.58 | 41.0 | 3.70e-01 | 74.7% | 100.0% |
| 3909822 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.58 | 49.0 | 4.58e-01 | 91.2% | 78.2% |
| 4650190 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.57 | 49.0 | 3.56e-01 | 94.5% | 42.7% |
| 4059301 | 1.1.13.47 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Dit_like | 0.57 | 48.0 | 4.50e-01 | 91.2% | 80.0% |
| 5040464 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.57 | 49.0 | 4.84e-01 | 94.5% | 88.4% |
| 3991601 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.56 | 51.0 | 4.24e-01 | 100.0% | 90.6% |
| 3506163 | 223.1.1.29 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_11 | 0.56 | 48.0 | 4.30e-01 | 92.3% | 92.7% |
| 3945791 | 1.1.5.10 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct | 0.56 | 48.0 | 3.85e-01 | 93.4% | 61.7% |
| 3602499 | 1.1.5.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N | 0.56 | 48.0 | 4.26e-01 | 93.4% | 73.1% |
| 5027270 | 1.1.5.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N | 0.56 | 47.0 | 3.78e-01 | 91.2% | 61.1% |
| 3535347 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.56 | 47.0 | 4.36e-01 | 91.2% | 74.8% |
| 3587074 | 1.1.13.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Dit_N | 0.55 | 45.0 | 4.23e-01 | 90.1% | 72.7% |
| 5007131 | 1.1.7.28 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › HAS-barrel | 0.55 | 48.0 | 4.75e-01 | 94.5% | 89.5% |
| 3406375 | 223.1.1.29 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_11 | 0.54 | 49.0 | 3.93e-01 | 100.0% | 75.0% |
| 5057186 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.54 | 45.0 | 4.59e-01 | 94.5% | 90.0% |
| 1117606 | 1.1.13.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Dit_N | 0.54 | 44.0 | 3.95e-01 | 91.2% | 76.9% |
| 4968263 | 1.1.5.91 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_C | 0.54 | 46.0 | 3.47e-01 | 92.3% | 70.5% |
| 3571632 | 223.1.1.29 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_11 | 0.54 | 48.0 | 4.28e-01 | 100.0% | 93.1% |
| 4118093 | 1.1.5.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N | 0.53 | 47.0 | 3.92e-01 | 96.7% | 79.4% |
| 5053266 | 1.1.5.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N | 0.53 | 46.0 | 3.85e-01 | 96.7% | 69.4% |
| 4988254 | 1.1.5.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N | 0.52 | 44.0 | 3.57e-01 | 94.5% | 71.7% |
| 5067070 | 1.1.5.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N | 0.52 | 45.0 | 3.89e-01 | 93.4% | 72.9% |
| 4992907 | 1.1.5.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N | 0.52 | 45.0 | 3.76e-01 | 93.4% | 65.2% |
| 3736056 | 304.102.1.1 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_2 | 0.52 | 45.0 | 3.22e-01 | 98.9% | 93.8% |
| 3946057 | 304.102.1.1 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_2 | 0.52 | 44.0 | 3.38e-01 | 96.7% | 62.8% |
| 3943282 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.51 | 47.0 | 4.24e-01 | 98.9% | 83.3% |
| 3457753 | 304.8.1.66 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › DUF7049 | 0.51 | 36.0 | 3.46e-01 | 91.2% | 61.8% |
| 3942714 | 886.1.1.2 ↗ | a+b duplicates or obligate multimers › Probable bacterial effector-binding domain › Probable bacterial effector-binding domain › Probable bacterial effector-binding domain › GyrI-like | 0.51 | 42.0 | 3.45e-01 | 91.2% | 94.1% |
| 3719492 | 304.102.1.1 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_2 | 0.51 | 43.0 | 3.06e-01 | 96.7% | 56.5% |
| 4451014 | 7552.1.1.1 ↗ | a/b three-layered sandwiches › Amidase signature (AS) enzymes › Amidase signature (AS) enzymes › Amidase signature (AS) enzymes › Amidase | 0.50 | 44.0 | 2.86e-01 | 100.0% | 44.9% |