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MT521992.1__QLF83373.1__SEA_NICEHOUSE_152__00129

Bact-Vir

MT521992.1__QLF83373.1__SEA_NICEHOUSE_152__00129

Identity

Accession:
MT521992 ↗
Kingdom:
phage

Quality

68.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Trinavirus› Rhodococcus_phage_NiceHouse

TaxID: 2743998

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-90
PDB
Domain cluster: representative
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3r84B00 6.10.280.160 Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Mediator of RNA polymerase II transcription subunit 22 0.77 55.0 5.83e-01 75.3% 100.0%
3thxB04 1.10.1420.10 Mainly Alpha › Orthogonal Bundle › MutS, DNA mismatch repair protein; Chain A, domain 3 › 0.66 49.0 4.37e-01 78.7% 78.9%
1ewqA04 1.10.1420.10 Mainly Alpha › Orthogonal Bundle › MutS, DNA mismatch repair protein; Chain A, domain 3 › 0.62 50.0 4.41e-01 89.9% 74.3%
5wzoA00 1.20.90.10 Mainly Alpha › Up-down Bundle › Phospholipase A2 › Phospholipase A2 domain 0.51 36.0 3.23e-01 74.2% 53.7%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5012108 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.75 67.0 4.62e-01 100.0% 48.2%
3387205 3922.1.1.0 ↗ alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 0.62 50.0 5.00e-01 87.6% 86.7%
None — 0.60 43.0 3.52e-01 74.2% 80.0%
3253944 5041.1.1.0 ↗ extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C 0.54 44.0 3.44e-01 87.6% 43.4%