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MT521992.1__QLF83452.1__SEA_NICEHOUSE_239__00208
Bact-VirMT521992.1__QLF83452.1__SEA_NICEHOUSE_239__00208
Identity
- Accession:
- MT521992 ↗
- Kingdom:
- phage
Quality
69.4
mean pLDDT
Taxonomy
TaxID: 2743998
Cluster
View cluster (14 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 34-95
Domain cluster:
representative
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2xmjA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 41.0 | 4.09e-01 | 74.2% | 65.1% |
| 1cc8A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.61 | 39.0 | 3.76e-01 | 71.0% | 55.6% |
| 1gmnA01 | 3.50.4.10 | Alpha Beta › 3-Layer(bba) Sandwich › Hepatocyte Growth Factor › Hepatocyte Growth Factor | 0.60 | 46.0 | 4.17e-01 | 85.5% | 69.3% |
| 5zneA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 39.0 | 3.73e-01 | 74.2% | 56.2% |
| 1upsA02 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.59 | 45.0 | 3.59e-01 | 85.5% | 81.2% |
| 4aukA01 | 3.30.70.2810 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 39.0 | 3.65e-01 | 71.0% | 54.4% |
| 1jwwA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 37.0 | 3.49e-01 | 74.2% | 51.2% |
| 2e29A01 | 3.30.70.2280 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 39.0 | 3.72e-01 | 72.6% | 60.5% |
| 7sk7A01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.57 | 41.0 | 2.75e-01 | 77.4% | 35.6% |
| 2r6uA01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.56 | 41.0 | 3.36e-01 | 79.0% | 50.0% |
| 3uqcB01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.56 | 40.0 | 3.59e-01 | 77.4% | 95.7% |
| 3gygC02 | 3.30.70.1410 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › yhjk (haloacid dehalogenase-like hydrolase protein) domain | 0.56 | 40.0 | 3.80e-01 | 79.0% | 65.0% |
| 2yweA03 | 3.30.70.870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 | 0.55 | 37.0 | 3.45e-01 | 71.0% | 54.9% |
| 4qjvA01 | 3.30.1360.10 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit | 0.55 | 39.0 | 3.52e-01 | 77.4% | 57.3% |
| 1i8nA00 | 3.50.4.10 | Alpha Beta › 3-Layer(bba) Sandwich › Hepatocyte Growth Factor › Hepatocyte Growth Factor | 0.55 | 44.0 | 3.98e-01 | 91.9% | 73.0% |
| 1ybiA01 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.54 | 43.0 | 3.38e-01 | 90.3% | 45.5% |
| 4zevA02 | 3.30.1240.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › | 0.53 | 40.0 | 3.43e-01 | 83.9% | 61.7% |
| 3e3xA01 | 3.30.70.870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 | 0.53 | 40.0 | 3.29e-01 | 82.3% | 47.8% |
| 6lf2B01 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.53 | 40.0 | 3.32e-01 | 87.1% | 79.8% |
| 4g08A02 | 3.30.1370.120 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.52 | 34.0 | 3.34e-01 | 74.2% | 58.6% |
| 6lpwB01 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.52 | 37.0 | 2.73e-01 | 75.8% | 59.9% |
| 2xhcA01 | 3.30.70.940 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › NusG, N-terminal domain | 0.51 | 38.0 | 3.37e-01 | 82.3% | 95.8% |
| 5axmB00 | 3.30.70.3000 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › tRNA(His) guanylyltransferase (Thg1) | 0.50 | 39.0 | 2.76e-01 | 90.3% | 85.4% |
| 3tj8A02 | 3.30.70.790 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › UreE, C-terminal domain | 0.50 | 37.0 | 3.56e-01 | 82.3% | 89.2% |
| 5koxA02 | 3.30.70.2450 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.50 | 32.0 | 3.01e-01 | 72.6% | 46.5% |
ECOD (41)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4159102 | 304.14.1.0 ↗ | a+b two layers › Alpha-beta plaits › Sporulation related repeat (SPOR) › Sporulation related repeat (SPOR) | 0.72 | 45.0 | 4.39e-01 | 72.6% | 57.1% |
| 4297519 | 304.14.1.1 ↗ | a+b two layers › Alpha-beta plaits › Sporulation related repeat (SPOR) › Sporulation related repeat (SPOR) › SPOR | 0.68 | 49.0 | 4.61e-01 | 75.8% | 63.5% |
| 4933368 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.68 | 46.0 | 4.14e-01 | 71.0% | 62.4% |
| 4174854 | 3016.1.1.1 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Aminotran_1_2 | 0.62 | 43.0 | 4.04e-01 | 74.2% | 60.0% |
| 4360285 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.61 | 41.0 | 3.14e-01 | 71.0% | 66.7% |
| 5075143 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.60 | 41.0 | 2.87e-01 | 71.0% | 22.4% |
| 5066390 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.60 | 42.0 | 3.43e-01 | 72.6% | 42.6% |
| 3806501 | 387.1.5.18 ↗ | few secondary structure elements › omega toxin-like › omega toxin-related › Scorpion toxin-like › AtDEF-like | 0.59 | 40.0 | 4.43e-01 | 71.0% | 95.6% |
| 3743674 | 4143.1.1.0 ↗ | a+b two layers › THUMP domain-like › THUMP domain-like › THUMP domain-like | 0.59 | 41.0 | 3.84e-01 | 74.2% | 62.5% |
| 4069972 | 304.120.1.2 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI › RlmM_FDX | 0.59 | 39.0 | 3.72e-01 | 71.0% | 57.3% |
| 4036794 | 304.120.1.2 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI › RlmM_FDX | 0.59 | 39.0 | 3.72e-01 | 71.0% | 57.3% |
| 3745161 | 4323.1.1.2 ↗ | alpha bundles › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › V-ATPase_C | 0.59 | 38.0 | 3.32e-01 | 71.0% | 42.0% |
| 4100544 | 304.120.1.2 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI › RlmM_FDX | 0.58 | 39.0 | 3.70e-01 | 71.0% | 57.3% |
| 3968480 | 304.120.1.2 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI › RlmM_FDX | 0.58 | 38.0 | 3.67e-01 | 71.0% | 57.3% |
| 3218849 | 390.1.1.1 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 | 0.57 | 46.0 | 4.02e-01 | 88.7% | 74.7% |
| 4627709 | 304.120.1.2 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI › RlmM_FDX | 0.57 | 39.0 | 3.76e-01 | 71.0% | 64.3% |
| 3892180 | 327.16.1.13 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › KH_PARP14_2 | 0.57 | 36.0 | 3.71e-01 | 71.0% | 66.7% |
| 3963468 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.57 | 39.0 | 3.31e-01 | 72.6% | 81.9% |
| 5056296 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.57 | 36.0 | 3.68e-01 | 71.0% | 66.7% |
| 1870741 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.56 | 42.0 | 3.35e-01 | 80.6% | 50.8% |
| 4961372 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.56 | 39.0 | 3.64e-01 | 74.2% | 67.5% |
| 4667947 | 304.120.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI | 0.56 | 39.0 | 3.80e-01 | 74.2% | 67.1% |
| 3651303 | 304.109.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e › Ribosomal_L23 | 0.56 | 37.0 | 3.78e-01 | 71.0% | 71.7% |
| 3659633 | 304.7.1.2 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors › Inhibitor_I9 | 0.56 | 39.0 | 3.42e-01 | 74.2% | 50.5% |
| 3403707 | 3016.1.1.2 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Aminotran_3 | 0.56 | 41.0 | 3.34e-01 | 79.0% | 46.7% |
| 3314359 | 320.1.1.11 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain › PF27261 | 0.55 | 39.0 | 3.68e-01 | 79.0% | 61.3% |
| 4978015 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.55 | 40.0 | 3.50e-01 | 79.0% | 55.0% |
| 3738318 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.54 | 37.0 | 3.40e-01 | 74.2% | 55.0% |
| 3599467 | 601.23.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III | 0.54 | 36.0 | 2.34e-01 | 71.0% | 21.2% |
| 3467715 | 109.4.1.1558 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DUF2428, TPR_Trm732, TPR_Trm732_C | 0.53 | 40.0 | 2.19e-01 | 90.3% | 11.1% |
| 4569207 | 304.120.1.2 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI › RlmM_FDX | 0.53 | 36.0 | 3.52e-01 | 72.6% | 64.3% |
| 3728676 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.52 | 40.0 | 2.83e-01 | 88.7% | 37.9% |
| 4207299 | 304.5.1.0 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like | 0.52 | 35.0 | 3.39e-01 | 72.6% | 58.7% |
| 3529971 | 327.11.2.18 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › DTX3L_KH-like | 0.52 | 36.0 | 3.38e-01 | 74.2% | 58.7% |
| 3410353 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.52 | 40.0 | 2.62e-01 | 83.9% | 21.5% |
| 5014121 | 304.120.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI | 0.52 | 33.0 | 3.27e-01 | 71.0% | 60.0% |
| 3877590 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.52 | 36.0 | 3.46e-01 | 75.8% | 64.0% |
| 5011097 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.52 | 33.0 | 3.17e-01 | 74.2% | 53.3% |
| 3394154 | 206.1.2.3 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › SAICAR synthase › IPK | 0.51 | 42.0 | 2.77e-01 | 95.2% | 82.0% |
| 3273692 | 101.1.2.615 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFA2_Winged_2, TFA2_E-tether | 0.51 | 34.0 | 3.06e-01 | 90.3% | 45.3% |
| 4991848 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.50 | 33.0 | 3.10e-01 | 72.6% | 51.2% |