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MT521992.1__QLF83486.1__SEA_NICEHOUSE_273__00242
Bact-VirMT521992.1__QLF83486.1__SEA_NICEHOUSE_273__00242
Identity
- Accession:
- MT521992 ↗
- Kingdom:
- phage
Quality
77.4
mean pLDDT
Taxonomy
TaxID: 2743998
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-40
Domain cluster:
representative
CATH (28)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3mhsC02 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.86 | 60.0 | 6.61e-01 | 75.7% | 100.0% |
| 3vhtB02 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.80 | 56.0 | 5.81e-01 | 75.7% | 82.4% |
| 3hcsA02 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.77 | 59.0 | 5.20e-01 | 81.1% | 61.5% |
| 2drpA01 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.77 | 61.0 | 6.28e-01 | 94.6% | 100.0% |
| 2lo3A01 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.76 | 51.0 | 5.39e-01 | 75.7% | 89.7% |
| 2eodA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.75 | 59.0 | 4.84e-01 | 86.5% | 69.7% |
| 6qv4A04 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.75 | 49.0 | 3.07e-01 | 73.0% | 12.7% |
| 5vmzA01 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.73 | 54.0 | 5.41e-01 | 86.5% | 92.3% |
| 2ph1A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.72 | 45.0 | 2.75e-01 | 100.0% | 9.7% |
| 8d3mA02 | 1.20.120.920 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CRISPR-associated endonuclease Cas1, C-terminal domain | 0.70 | 50.0 | 3.08e-01 | 83.8% | 12.5% |
| 5dkaA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.67 | 57.0 | 4.18e-01 | 94.6% | 86.5% |
| 1z1bA01 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.66 | 51.0 | 4.70e-01 | 100.0% | 78.9% |
| 5veoA01 | 3.40.720.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alkaline Phosphatase, subunit A › Alkaline Phosphatase, subunit A | 0.66 | 47.0 | 2.82e-01 | 78.4% | 63.8% |
| 1wimA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.64 | 48.0 | 3.70e-01 | 89.2% | 46.8% |
| 1y02A01 | 1.10.720.140 | Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › | 0.61 | 46.0 | 3.83e-01 | 91.9% | 46.2% |
| 2o0aA00 | 3.40.850.20 | Alpha Beta › 3-Layer(aba) Sandwich › Kinesin › | 0.61 | 52.0 | 3.16e-01 | 100.0% | 88.8% |
| 1rxqD00 | 1.20.120.450 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain | 0.60 | 47.0 | 3.20e-01 | 100.0% | 55.0% |
| 5hwoA00 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.59 | 51.0 | 2.90e-01 | 100.0% | 69.1% |
| 4f9cA02 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.59 | 49.0 | 3.19e-01 | 100.0% | 40.8% |
| 4zohA05 | 3.30.365.10 | Alpha Beta › 2-Layer Sandwich › Aldehyde Oxidoreductase; domain 4 › Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain | 0.58 | 48.0 | 3.31e-01 | 100.0% | 41.8% |
| 1zowA02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.57 | 46.0 | 3.16e-01 | 94.6% | 33.8% |
| 2xocA01 | 3.30.40.140 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › | 0.57 | 40.0 | 3.20e-01 | 75.7% | 59.0% |
| 1kcgC00 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.56 | 48.0 | 3.09e-01 | 100.0% | 21.2% |
| 3fjuB00 | 3.30.40.170 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › | 0.55 | 44.0 | 3.84e-01 | 94.6% | 89.2% |
| 3u21A00 | 1.10.10.2430 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › NFRKB winged helix-like domain | 0.55 | 48.0 | 3.43e-01 | 100.0% | 96.3% |
| 6ks6a01 | 1.10.560.10 | Mainly Alpha › Orthogonal Bundle › GROEL; domain 1 › GroEL-like equatorial domain | 0.54 | 45.0 | 2.72e-01 | 100.0% | 14.1% |
| 1e29A00 | 1.10.760.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain | 0.53 | 44.0 | 3.07e-01 | 100.0% | 37.8% |
| 2gqrA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.51 | 45.0 | 3.26e-01 | 100.0% | 75.0% |
ECOD (52)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3888042 | 386.1.1.283 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › PF26748 | 0.86 | 59.0 | 6.49e-01 | 73.0% | 96.6% |
| 5010276 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.86 | 69.0 | 4.63e-01 | 91.9% | 25.4% |
| 3663614 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.83 | 58.0 | 5.41e-01 | 73.0% | 84.4% |
| 3495811 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.82 | 60.0 | 6.33e-01 | 81.1% | 100.0% |
| 3445682 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.80 | 59.0 | 5.39e-01 | 86.5% | 60.0% |
| 3814664 | 386.1.1.71 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › SURF2 | 0.80 | 63.0 | 6.03e-01 | 91.9% | 82.2% |
| 3843296 | 386.1.1.112 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2HC_2 | 0.78 | 60.0 | 5.31e-01 | 86.5% | 61.8% |
| 3478140 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.78 | 60.0 | 5.39e-01 | 83.8% | 82.0% |
| 4278066 | 386.1.1.1 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 | 0.78 | 58.0 | 4.65e-01 | 86.5% | 41.8% |
| 3570260 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.77 | 54.0 | 4.64e-01 | 75.7% | 48.3% |
| 3770678 | 386.1.1.143 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › Znf_XAF1_N | 0.76 | 62.0 | 5.45e-01 | 91.9% | 61.8% |
| 3435151 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.76 | 61.0 | 6.27e-01 | 94.6% | 100.0% |
| 3709137 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.75 | 59.0 | 5.56e-01 | 86.5% | 80.0% |
| 3598119 | 330.3.1.0 ↗ | a+b two layers › dsRBD-like › Peptidyl-tRNA hydrolase domain-like › Peptidyl-tRNA hydrolase domain-like | 0.75 | 60.0 | 5.08e-01 | 100.0% | 64.3% |
| 3260234 | 376.1.1.23 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 | 0.72 | 56.0 | 3.83e-01 | 86.5% | 97.7% |
| 3498926 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.72 | 52.0 | 5.37e-01 | 86.5% | 85.7% |
| 4007589 | 101.1.1.40 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Recombinase | 0.69 | 43.0 | 2.98e-01 | 89.2% | 18.4% |
| 3689148 | 604.6.1.0 ↗ | alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain | 0.67 | 52.0 | 3.19e-01 | 89.2% | 41.2% |
| 3924159 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.66 | 50.0 | 3.88e-01 | 86.5% | 43.3% |
| 4028249 | 330.3.1.0 ↗ | a+b two layers › dsRBD-like › Peptidyl-tRNA hydrolase domain-like › Peptidyl-tRNA hydrolase domain-like | 0.66 | 50.0 | 4.56e-01 | 89.2% | 66.7% |
| 3962784 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.66 | 46.0 | 4.75e-01 | 75.7% | 100.0% |
| 4943171 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.66 | 49.0 | 4.70e-01 | 83.8% | 77.8% |
| 3735240 | 376.1.1.114 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf_RING-like | 0.65 | 48.0 | 4.12e-01 | 81.1% | 66.7% |
| 3402338 | 7523.1.1.0 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II | 0.63 | 50.0 | 3.38e-01 | 97.3% | 24.1% |
| None | — | 0.63 | 43.0 | 3.11e-01 | 73.0% | 36.5% | |
| None | — | 0.63 | 44.0 | 3.05e-01 | 73.0% | 33.6% | |
| 5071927 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.63 | 44.0 | 3.90e-01 | 75.7% | 72.7% |
| 3598442 | 376.1.1.78 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › Zf_2nd_IFT121 | 0.61 | 42.0 | 4.01e-01 | 73.0% | 66.7% |
| 4537295 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.61 | 42.0 | 4.33e-01 | 75.7% | 91.4% |
| 4944680 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.61 | 51.0 | 2.78e-01 | 100.0% | 33.1% |
| 3233884 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.60 | 45.0 | 3.33e-01 | 100.0% | 29.5% |
| 4952310 | 2003.1.3.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › Pyr_redox_2 | 0.60 | 50.0 | 3.19e-01 | 100.0% | 43.4% |
| 4945028 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.60 | 48.0 | 3.95e-01 | 94.6% | 89.2% |
| 3259718 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.59 | 45.0 | 3.45e-01 | 89.2% | 39.0% |
| 3860380 | 386.1.1.269 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › CCHC_BCL-11A | 0.59 | 40.0 | 4.03e-01 | 83.8% | 100.0% |
| 3211179 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.58 | 45.0 | 3.49e-01 | 86.5% | 68.2% |
| 3187970 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.58 | 41.0 | 3.66e-01 | 78.4% | 71.7% |
| 3926399 | 376.1.1.95 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › RH_dom | 0.57 | 46.0 | 4.31e-01 | 94.6% | 70.0% |
| 4026585 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.57 | 45.0 | 2.78e-01 | 89.2% | 64.0% |
| 5021644 | 2003.1.3.10 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › FAD_oxidored | 0.57 | 48.0 | 3.10e-01 | 100.0% | 36.7% |
| 3602640 | 2004.1.1.120 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ResIII | 0.56 | 46.0 | 2.83e-01 | 94.6% | 26.4% |
| 3993220 | 376.1.2.24 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › RH_dom | 0.56 | 45.0 | 4.07e-01 | 94.6% | 67.3% |
| 3734051 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.56 | 40.0 | 3.89e-01 | 83.8% | 82.2% |
| 3233807 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.55 | 49.0 | 3.95e-01 | 100.0% | 52.9% |
| 3928741 | 376.1.1.27 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_5 | 0.55 | 47.0 | 3.61e-01 | 97.3% | 76.5% |
| 3623406 | 376.1.1.20 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX | 0.54 | 48.0 | 3.53e-01 | 100.0% | 58.9% |
| 3744636 | 376.1.1.27 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_5 | 0.54 | 42.0 | 3.33e-01 | 97.3% | 64.4% |
| 3685378 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.53 | 38.0 | 3.34e-01 | 75.7% | 58.3% |
| 3937568 | 376.1.1.37 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › SLX1_C | 0.53 | 46.0 | 3.56e-01 | 100.0% | 49.4% |
| 2443833 | 149.1.1.1 ↗ | alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450 | 0.53 | 40.0 | 2.72e-01 | 89.2% | 34.2% |
| 3389987 | 394.1.1.1 ↗ | few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › CBM_14 | 0.52 | 37.0 | 3.35e-01 | 83.8% | 69.2% |
| 3669182 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.51 | 44.0 | 3.58e-01 | 100.0% | 61.1% |