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MT521996.1__QLF83939.1__SEA_BECKERTON_54__00054

Bact-Vir

MT521996.1__QLF83939.1__SEA_BECKERTON_54__00054

Identity

Accession:
MT521996 ↗
Kingdom:
phage

Quality

77.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 34-87
PDB
Domain cluster: representative
CATH (49)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3oyyA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.86 79.0 7.34e-01 100.0% 98.5%
1ijqA01 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.74 57.0 3.66e-01 83.3% 26.0%
1khiA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.73 63.0 5.72e-01 100.0% 93.3%
6igbA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.72 55.0 3.33e-01 83.3% 21.2%
1l0qA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.71 54.0 3.38e-01 83.3% 20.9%
2f5tX02 2.30.30.690 Mainly Beta › Roll › SH3 type barrels. › 0.71 61.0 5.22e-01 100.0% 96.7%
4iupA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.70 61.0 5.51e-01 96.3% 98.6%
3tc9A02 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.70 51.0 3.17e-01 79.6% 27.9%
1qypA00 2.20.25.10 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.69 46.0 4.62e-01 70.4% 80.7%
3cgbA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.67 51.0 3.64e-01 85.2% 47.6%
1r4kA01 2.170.260.10 Mainly Beta › Beta Complex › paz domain › paz domain 0.65 54.0 4.22e-01 100.0% 93.2%
2ppqA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.65 49.0 4.14e-01 83.3% 95.7%
7e52A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.64 49.0 3.75e-01 83.3% 70.3%
1fvuB00 3.10.100.10 Alpha Beta › Roll › Mannose-Binding Protein A; Chain A › Mannose-Binding Protein A, subunit A 0.64 55.0 4.31e-01 100.0% 81.8%
5cqfA00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.64 49.0 2.94e-01 85.2% 33.4%
1wiiA01 2.20.25.190 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.63 45.0 4.39e-01 77.8% 85.5%
3k30A03 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.63 48.0 3.62e-01 83.3% 67.7%
1df0A02 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.63 53.0 4.54e-01 98.1% 75.0%
2qggA02 2.30.30.240 Mainly Beta › Roll › SH3 type barrels. › PRC-barrel domain 0.63 50.0 4.54e-01 96.3% 90.4%
6my0A02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.63 46.0 4.45e-01 83.3% 83.1%
3g7nB00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.62 52.0 3.39e-01 96.3% 92.2%
1v7pB00 3.10.100.10 Alpha Beta › Roll › Mannose-Binding Protein A; Chain A › Mannose-Binding Protein A, subunit A 0.62 53.0 4.15e-01 100.0% 81.1%
1sb2B00 3.10.100.10 Alpha Beta › Roll › Mannose-Binding Protein A; Chain A › Mannose-Binding Protein A, subunit A 0.62 53.0 4.13e-01 100.0% 80.6%
1mhnA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.62 49.0 4.82e-01 94.4% 96.6%
5ygbA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.62 50.0 4.57e-01 100.0% 81.2%
4tm3A00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.61 47.0 2.81e-01 85.2% 33.8%
4b9wA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.61 45.0 4.53e-01 83.3% 91.1%
4p78C00 3.30.920.30 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Hypothetical protein. 0.61 51.0 4.81e-01 96.3% 97.0%
5dezA03 3.10.50.10 Alpha Beta › Roll › Chitinase A; domain 3 › 0.61 40.0 3.68e-01 85.2% 50.0%
7cfdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.60 49.0 4.59e-01 100.0% 83.6%
2diqA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.59 48.0 4.13e-01 100.0% 62.0%
2i06A01 3.50.14.10 Alpha Beta › 3-Layer(bba) Sandwich › Replication Terminator Protein (Tus); Chain A, domain 1 › Replication terminator Tus, domain 1 superfamily/Replication terminator Tus 0.59 51.0 3.49e-01 100.0% 82.7%
5gqoA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.59 39.0 3.41e-01 72.2% 82.5%
2it1A03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.58 41.0 4.02e-01 75.9% 77.0%
6innA04 3.10.100.10 Alpha Beta › Roll › Mannose-Binding Protein A; Chain A › Mannose-Binding Protein A, subunit A 0.58 49.0 3.84e-01 100.0% 81.4%
5b1rA00 3.10.100.10 Alpha Beta › Roll › Mannose-Binding Protein A; Chain A › Mannose-Binding Protein A, subunit A 0.58 49.0 3.94e-01 100.0% 75.9%
2ckkA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.58 42.0 4.31e-01 83.3% 98.1%
6c6sD02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.58 44.0 4.34e-01 88.9% 90.0%
1byfA00 3.10.100.10 Alpha Beta › Roll › Mannose-Binding Protein A; Chain A › Mannose-Binding Protein A, subunit A 0.57 48.0 3.81e-01 100.0% 88.6%
1ib8A02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.57 44.0 4.22e-01 94.4% 95.5%
1y9lA00 2.40.128.230 Mainly Beta › Beta Barrel › Lipocalin › Pilot protein MxiM 0.57 44.0 3.62e-01 88.9% 81.8%
2eqkA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.56 45.0 4.24e-01 100.0% 84.9%
3p8bB02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.55 43.0 4.25e-01 94.4% 95.2%
4r3dA03 2.60.120.1680 Mainly Beta › Sandwich › Jelly Rolls › 0.54 42.0 3.34e-01 100.0% 38.0%
1x6gA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.54 40.0 3.70e-01 88.9% 79.0%
3rn5A02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.53 36.0 3.18e-01 74.1% 79.3%
6vlfA03 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.52 37.0 3.69e-01 81.5% 98.3%
7uqyB01 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.52 42.0 2.83e-01 92.6% 36.0%
1o4yA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.50 40.0 2.72e-01 100.0% 63.3%
ECOD (80)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3306779 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.93 87.0 8.07e-01 100.0% 100.0%
3265170 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.92 86.0 8.05e-01 100.0% 100.0%
4037383 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.92 86.0 8.01e-01 100.0% 100.0%
4073200 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.90 81.0 7.56e-01 98.1% 100.0%
4484893 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.74 58.0 5.47e-01 85.2% 83.1%
3928030 5.1.4.235 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_IFT140_1st 0.73 56.0 3.17e-01 83.3% 11.1%
4118011 4.1.1.248 beta barrels › SH3 › SH3 › SH3 › CABIT 0.71 59.0 5.19e-01 98.1% 94.1%
3331569 375.1.1.31 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Elf1 0.69 50.0 5.00e-01 77.8% 80.0%
3317787 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.68 50.0 5.15e-01 79.6% 98.0%
3319421 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.68 50.0 5.12e-01 79.6% 98.0%
3905549 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.68 59.0 4.74e-01 98.1% 57.1%
3957008 5.1.3.7 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › NHL 0.67 56.0 3.96e-01 94.4% 45.9%
3506401 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.66 50.0 3.13e-01 83.3% 21.3%
3622139 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.66 55.0 4.83e-01 100.0% 66.7%
3627688 4.1.1.319 beta barrels › SH3 › SH3 › SH3 › SH3_Hsr9 0.66 57.0 4.21e-01 100.0% 70.7%
4980041 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.66 48.0 5.13e-01 79.6% 100.0%
3218349 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.65 55.0 4.67e-01 100.0% 61.1%
3409587 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.65 54.0 4.70e-01 100.0% 70.0%
3519774 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.65 54.0 4.49e-01 100.0% 59.0%
4944397 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.65 45.0 4.65e-01 74.1% 92.0%
4255523 2003.1.2.24 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.65 48.0 3.64e-01 81.5% 63.7%
1877308 2.1.1.81 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rrp44_S1 0.64 54.0 4.82e-01 100.0% 84.3%
3997949 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.64 56.0 4.79e-01 100.0% 67.8%
5004691 2003.1.2.24 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.64 49.0 3.40e-01 85.2% 46.7%
4989457 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.64 45.0 4.61e-01 74.1% 90.0%
4026282 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.64 56.0 4.74e-01 100.0% 67.8%
4317888 2003.1.2.147 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox, Pyr_redox_3 0.64 48.0 3.72e-01 83.3% 68.0%
3409460 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.63 52.0 4.34e-01 100.0% 73.3%
3393358 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.63 52.0 4.48e-01 100.0% 71.6%
5042177 4.6.1.2 beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC 0.63 46.0 4.15e-01 81.5% 78.8%
4010681 4.31.1.1 beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.63 50.0 4.35e-01 96.3% 69.5%
3267329 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.63 51.0 4.12e-01 100.0% 49.6%
4118552 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.63 51.0 4.75e-01 100.0% 92.0%
4464485 2003.1.2.30 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_3 0.63 48.0 3.70e-01 85.2% 66.2%
3547102 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.63 55.0 4.75e-01 100.0% 75.3%
3704395 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.62 50.0 4.80e-01 94.4% 98.4%
3628870 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.62 51.0 4.23e-01 100.0% 54.5%
3798859 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.62 54.0 4.62e-01 100.0% 64.4%
3393347 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.62 51.0 4.49e-01 100.0% 65.6%
3393360 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.62 51.0 4.17e-01 100.0% 56.5%
4565130 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.62 50.0 4.37e-01 100.0% 69.5%
3706223 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.62 50.0 4.24e-01 100.0% 69.5%
4031510 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.62 49.0 4.30e-01 94.4% 75.6%
3713334 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.62 49.0 4.82e-01 92.6% 100.0%
3389175 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.61 50.0 4.39e-01 100.0% 65.6%
3608562 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.61 49.0 3.72e-01 98.1% 63.5%
4150396 4.6.1.6 beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC_RimM 0.61 47.0 4.39e-01 90.7% 89.2%
3656401 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.61 49.0 4.58e-01 100.0% 82.7%
3501699 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.61 50.0 4.53e-01 100.0% 76.2%
3819668 375.8.1.1 few secondary structure elements › Rubredoxin-like › Zinc-binding domain of translation initiation factor 2 beta › Zinc-binding domain of translation initiation factor 2 beta › eIF-5_eIF-2B 0.61 41.0 4.34e-01 75.9% 86.4%
3951220 5.1.3.22 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › GSDH 0.61 53.0 3.21e-01 98.1% 82.6%
4227222 4.6.1.2 beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC 0.61 47.0 4.39e-01 87.0% 90.0%
3790897 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.61 49.0 4.22e-01 100.0% 74.0%
4026958 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.60 46.0 4.67e-01 88.9% 100.0%
3503815 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.60 52.0 4.55e-01 98.1% 65.9%
3246086 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.60 49.0 4.28e-01 100.0% 68.4%
4286961 4.6.1.2 beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC 0.60 48.0 4.53e-01 94.4% 90.0%
3570368 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.60 49.0 4.18e-01 100.0% 69.0%
3924213 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.60 49.0 4.24e-01 100.0% 69.5%
4145939 4.6.1.6 beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC_RimM 0.60 48.0 4.49e-01 94.4% 90.0%
3917568 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.60 48.0 3.97e-01 100.0% 57.4%
3281618 4.31.1.1 beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.60 47.0 4.02e-01 94.4% 77.0%
3819340 4.1.1.322 beta barrels › SH3 › SH3 › SH3 › GPKOW_C 0.59 48.0 3.94e-01 100.0% 90.8%
3547093 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.59 48.0 4.23e-01 100.0% 72.2%
4064354 4.1.1.245 beta barrels › SH3 › SH3 › SH3 › SspH 0.59 45.0 4.47e-01 94.4% 96.7%
3840677 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.59 48.0 4.11e-01 100.0% 66.0%
4420173 4.1.1.43 beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.59 47.0 4.35e-01 98.1% 80.0%
3672445 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.58 48.0 3.68e-01 100.0% 72.4%
4470603 4.1.1.217 beta barrels › SH3 › SH3 › SH3 › zf-CCCH_4 0.58 48.0 3.52e-01 98.1% 60.6%
4891035 5.1.5.228 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › PF30551 0.58 48.0 3.54e-01 92.6% 40.4%
3730229 4.1.1.102 beta barrels › SH3 › SH3 › SH3 › Tudor_3 0.58 45.0 4.24e-01 96.3% 82.7%
3738641 4.1.1.102 beta barrels › SH3 › SH3 › SH3 › Tudor_3 0.57 45.0 4.21e-01 96.3% 82.7%
3756016 209.1.1.1 a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › Lectin_C 0.57 49.0 3.98e-01 100.0% 89.1%
3876945 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 43.0 2.81e-01 85.2% 34.2%
3508531 809.2.1.0 a+b two layers › BLIP-like › BT0923-like › BT0923-like 0.57 41.0 4.23e-01 83.3% 88.0%
5001589 4.1.1.14 beta barrels › SH3 › SH3 › SH3 › Ribosomal_L21e 0.57 46.0 3.89e-01 96.3% 67.0%
3317030 4.1.1.366 beta barrels › SH3 › SH3 › SH3 › PF26738 0.57 44.0 4.39e-01 94.4% 100.0%
3963560 6043.1.1.0 a+b two layers › yfeY-like › yfeY-like › yfeY-like 0.57 44.0 4.28e-01 92.6% 78.3%
5030311 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.53 37.0 3.73e-01 77.8% 78.2%
4619750 2004.1.1.159 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mur_ligase_M 0.50 41.0 2.75e-01 100.0% 81.6%