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MT521997.1__QLF84020.1__SEA_UPYO_41__00041

Bact-Vir

MT521997.1__QLF84020.1__SEA_UPYO_41__00041

Identity

Accession:
MT521997 ↗
Kingdom:
phage

Quality

76.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Trinevirus› Gordonia_phage_Upyo

TaxID: 2743989

Cluster

View cluster (4 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 7-65
PDB
Domain cluster: rep: NC_054723.1__YP_010059016.1__KHQ83_gp049__00227__D17-74
CATH (44)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2fggA01 3.30.160.240 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Rv1738 0.78 63.0 5.81e-01 100.0% 69.3%
2n3gA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.75 48.0 4.53e-01 100.0% 54.2%
6f1uK02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.71 61.0 4.63e-01 100.0% 42.8%
1b7eA01 3.90.350.10 Alpha Beta › Alpha-Beta Complex › Transposase Inhibitor Protein From Tn5; Chain A, domain 1 › Transposase Inhibitor Protein From Tn5; Chain A, domain 1 0.70 61.0 4.00e-01 100.0% 23.2%
4i1sB00 4.10.80.340 Few Secondary Structures › Irregular › Rhinovirus 14, subunit 4 › 0.68 39.0 4.13e-01 78.0% 63.5%
1bebA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.67 43.0 3.17e-01 89.8% 24.4%
1whqA01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.67 44.0 4.16e-01 94.9% 56.3%
3laxA00 3.30.300.30 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain 0.65 47.0 3.88e-01 78.0% 68.9%
2ra6C00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.65 41.0 3.14e-01 89.8% 26.6%
4indA01 2.60.120.1320 Mainly Beta › Sandwich › Jelly Rolls › 0.64 36.0 2.72e-01 96.6% 21.2%
3l4rA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.63 40.0 3.00e-01 89.8% 24.5%
1vwxS02 3.10.20.10 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.63 43.0 4.03e-01 94.9% 56.6%
4akrA02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.63 51.0 4.02e-01 100.0% 42.2%
1ew3A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.61 38.0 2.88e-01 89.8% 23.3%
3aonA00 1.10.287.3240 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.60 52.0 3.73e-01 100.0% 38.8%
2hj1A00 3.10.20.280 Alpha Beta › Roll › Ubiquitin-like (UB roll) › RnfH-like 0.60 41.0 3.82e-01 96.6% 54.5%
7jtjA01 3.30.559.30 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Nonribosomal peptide synthetase, condensation domain 0.58 45.0 3.09e-01 91.5% 23.5%
1qlmA02 3.30.1030.10 Alpha Beta › 2-Layer Sandwich › Methenyltetrahydromethanopterin Cyclohydrolase; Chain A, domain 2 › Methenyltetrahydromethanopterin Cyclohydrolase; Chain A, domain 2 0.58 49.0 3.49e-01 100.0% 64.1%
1dusA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.58 36.0 2.58e-01 100.0% 19.1%
2bmjA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.57 46.0 3.24e-01 86.4% 58.0%
3c19A02 3.10.20.300 Alpha Beta › Roll › Ubiquitin-like (UB roll) › mk0293 like domain 0.57 40.0 3.80e-01 100.0% 60.3%
1zwxA00 3.60.10.10 Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase 0.57 50.0 3.24e-01 100.0% 20.8%
1cx8A01 3.40.630.10 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases 0.56 49.0 3.13e-01 100.0% 38.1%
5da9A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.56 49.0 3.08e-01 100.0% 19.3%
2qlzA02 6.10.250.2960 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.55 49.0 4.36e-01 100.0% 70.9%
1iicA01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.55 46.0 3.27e-01 94.9% 31.2%
1krlA00 6.20.50.130 Special › Other non-globular › N-terminal domain of TfIIb › 0.55 33.0 3.62e-01 91.5% 79.5%
1dfvA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.55 42.0 3.03e-01 84.7% 37.6%
2kvtA00 3.30.730.30 Alpha Beta › 2-Layer Sandwich › GCC-box Binding Domain › YaiA protein 0.54 38.0 3.63e-01 74.6% 91.5%
2jxtA01 3.10.20.10 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.54 38.0 3.60e-01 100.0% 60.5%
4je3B00 3.10.20.720 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.53 41.0 3.76e-01 83.1% 66.2%
6r3mA01 2.60.120.430 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin 0.53 43.0 3.19e-01 93.2% 34.5%
2z13A00 2.30.29.170 Mainly Beta › Roll › PH-domain like › 0.53 37.0 3.10e-01 84.7% 38.5%
6lgqC01 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.53 46.0 3.55e-01 100.0% 44.3%
1m2xA00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.53 45.0 3.10e-01 98.3% 72.1%
1js3A03 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.52 46.0 3.94e-01 100.0% 99.0%
1yu9A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 42.0 3.10e-01 91.5% 94.6%
1u2eA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.51 41.0 2.80e-01 100.0% 83.6%
5oj2B02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 40.0 3.53e-01 93.2% 70.8%
3bzwF00 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.51 42.0 2.85e-01 94.9% 92.2%
3bxpB00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.51 40.0 2.72e-01 94.9% 93.5%
6m9yA00 3.30.1300.40 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › 0.50 35.0 3.53e-01 100.0% 77.2%
5cm2Z00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.50 36.0 2.60e-01 78.0% 53.8%
4c89C00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.50 45.0 2.78e-01 100.0% 61.9%
ECOD (69)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3960733 330.8.1.1 ↗ a+b two layers › dsRBD-like › Rv2632c-like › Rv2632c-like › Rv2632c-like 0.82 74.0 6.42e-01 100.0% 67.1%
5040847 5.1.5.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.79 50.0 3.10e-01 83.1% 12.9%
3951937 330.8.1.1 ↗ a+b two layers › dsRBD-like › Rv2632c-like › Rv2632c-like › Rv2632c-like 0.77 64.0 5.59e-01 100.0% 60.7%
5056727 3926.1.1.1 ↗ alpha bundles › V-type proton ATPase subunit D › V-type proton ATPase subunit D › V-type proton ATPase subunit D › ATP-synt_D 0.76 54.0 3.70e-01 76.3% 72.2%
3603448 3291.1.1.49 ↗ alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › NFACT_N 0.74 54.0 3.84e-01 76.3% 77.6%
3672943 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.74 58.0 5.67e-01 93.2% 78.5%
5050683 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.74 55.0 4.30e-01 100.0% 37.6%
4356113 3926.1.1.1 ↗ alpha bundles › V-type proton ATPase subunit D › V-type proton ATPase subunit D › V-type proton ATPase subunit D › ATP-synt_D 0.73 55.0 3.85e-01 79.7% 80.5%
3267419 601.51.1.7 ↗ alpha bundles › Four-helical up-and-down bundle › alpha-helical domain in phase 1 flagellin › alpha-helical domain in phase 1 flagellin › DUF4460 0.72 59.0 4.42e-01 96.6% 39.4%
4120507 292.2.1.1 ↗ a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box 0.72 40.0 3.38e-01 81.4% 33.7%
3926687 302.1.1.1 ↗ a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C 0.71 49.0 3.86e-01 71.2% 35.8%
5049862 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.69 57.0 4.01e-01 88.1% 40.0%
4539730 7558.1.1.0 ↗ a/b three-layered sandwiches › Glycerol-3-phosphate (1)-acyltransferase › Glycerol-3-phosphate (1)-acyltransferase › Glycerol-3-phosphate (1)-acyltransferase 0.69 57.0 3.91e-01 96.6% 25.0%
3645375 386.1.1.117 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › DUF7028 0.67 40.0 3.45e-01 79.7% 36.2%
3838659 5085.1.1.0 ↗ a+b duplicates or obligate multimers › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) 0.67 54.0 3.25e-01 88.1% 44.0%
3608074 221.1.1.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.65 44.0 3.59e-01 96.6% 35.0%
4055336 2003.1.5.73 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_16 0.65 51.0 3.45e-01 94.9% 22.3%
3187032 3926.1.1.1 ↗ alpha bundles › V-type proton ATPase subunit D › V-type proton ATPase subunit D › V-type proton ATPase subunit D › ATP-synt_D 0.65 57.0 3.95e-01 100.0% 35.1%
3883088 252.1.1.1 ↗ a+b two layers › DNA-binding domain › Methyl-CpG-binding domain, MBD › Methyl-CpG-binding domain, MBD › MBD 0.65 38.0 3.65e-01 89.8% 48.6%
3275483 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.64 44.0 4.24e-01 98.3% 61.4%
4954522 878.1.1.1 ↗ a+b two layers › Hypothetical protein MTH677 › Hypothetical protein MTH677 › Hypothetical protein MTH677 › DUF3194 0.64 50.0 4.36e-01 86.4% 96.8%
4428763 2484.1.1.36 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_2 0.64 55.0 3.60e-01 93.2% 38.7%
1209415 10.32.1.190 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › STIV_turret_1st 0.64 36.0 2.71e-01 96.6% 21.1%
3937747 5001.1.1.1 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 0.63 54.0 3.49e-01 98.3% 35.7%
4949473 5086.1.1.230 ↗ alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › ATP-synt_D 0.63 57.0 3.80e-01 100.0% 36.0%
4001707 284.1.3.0 ↗ a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain 0.63 53.0 4.62e-01 89.8% 90.6%
3867661 323.1.1.0 ↗ a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases 0.63 46.0 2.74e-01 78.0% 17.4%
4886985 7523.1.1.16 ↗ a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › DctP 0.63 45.0 3.55e-01 74.6% 39.2%
4083043 3926.1.1.1 ↗ alpha bundles › V-type proton ATPase subunit D › V-type proton ATPase subunit D › V-type proton ATPase subunit D › ATP-synt_D 0.62 52.0 3.66e-01 100.0% 31.1%
5013672 295.1.1.0 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.61 42.0 4.10e-01 91.5% 66.2%
3969662 5085.1.1.1 ↗ a+b duplicates or obligate multimers › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › OEP 0.61 54.0 3.20e-01 94.9% 30.0%
3986836 375.1.1.253 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-IS66 0.61 39.0 4.08e-01 79.7% 70.9%
4987228 331.3.1.0 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.60 45.0 3.27e-01 100.0% 28.4%
3704620 213.1.1.0 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.60 49.0 3.35e-01 89.8% 85.2%
3925690 284.1.3.0 ↗ a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain 0.60 49.0 4.53e-01 88.1% 100.0%
4961941 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.60 54.0 3.27e-01 100.0% 77.8%
3929189 2484.1.1.272 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF30715 0.60 48.0 3.50e-01 98.3% 97.4%
4966168 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.59 53.0 3.21e-01 96.6% 78.6%
4972532 878.1.1.1 ↗ a+b two layers › Hypothetical protein MTH677 › Hypothetical protein MTH677 › Hypothetical protein MTH677 › DUF3194 0.59 49.0 4.39e-01 100.0% 63.3%
3408021 3246.1.1.1 ↗ few secondary structure elements › Disulfide-rich domain in A Disintegrin And Metalloprotease (ADAM) domain-containing proteins › Disulfide-rich domain in A Disintegrin And Metalloprotease (ADAM) domain-containing proteins › Disulfide-rich domain in A Disintegrin And Metalloprotease (ADAM) domain-containing proteins › ADAM_CR 0.59 37.0 2.87e-01 84.7% 29.2%
4933528 3926.1.1.1 ↗ alpha bundles › V-type proton ATPase subunit D › V-type proton ATPase subunit D › V-type proton ATPase subunit D › ATP-synt_D 0.58 50.0 3.48e-01 100.0% 34.8%
3619274 2004.1.1.19 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.57 53.0 3.50e-01 100.0% 52.1%
3994619 3937.1.1.2 ↗ alpha bundles › Connexin 26 › Connexin 26 › Connexin 26 › Innexin 0.57 51.0 3.05e-01 98.3% 36.6%
5041611 3926.1.1.1 ↗ alpha bundles › V-type proton ATPase subunit D › V-type proton ATPase subunit D › V-type proton ATPase subunit D › ATP-synt_D 0.57 49.0 3.48e-01 100.0% 33.8%
3891450 2004.1.1.19 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.56 48.0 3.53e-01 94.9% 95.6%
4984373 3926.1.1.1 ↗ alpha bundles › V-type proton ATPase subunit D › V-type proton ATPase subunit D › V-type proton ATPase subunit D › ATP-synt_D 0.56 48.0 3.40e-01 100.0% 30.7%
5010198 12.1.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.56 31.0 2.50e-01 91.5% 23.2%
3593809 304.31.1.0 ↗ a+b two layers › Alpha-beta plaits › HMG-CoA reductase › NAD-binding domain of HMG-CoA reductase 0.55 45.0 3.68e-01 89.8% 90.9%
5056319 177.1.1.0 ↗ alpha bundles › Phospholipase C/P1 nuclease › Phospholipase C/P1 nuclease › Phospholipase C/P1 nuclease 0.55 43.0 3.22e-01 94.9% 96.8%
3562501 3075.1.1.0 ↗ a+b two layers › ubiquitin-binding domain from PLAA › ubiquitin-binding domain from PLAA › ubiquitin-binding domain from PLAA 0.55 40.0 3.79e-01 100.0% 62.5%
None — 0.55 34.0 2.49e-01 100.0% 19.5%
3326759 284.1.3.1 ↗ a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › SNF5 0.55 45.0 4.18e-01 89.8% 96.0%
5037750 3926.1.1.1 ↗ alpha bundles › V-type proton ATPase subunit D › V-type proton ATPase subunit D › V-type proton ATPase subunit D › ATP-synt_D 0.55 46.0 3.33e-01 100.0% 33.8%
4945109 213.1.1.0 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.55 45.0 3.40e-01 93.2% 59.4%
5055900 223.1.1.14 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 0.54 37.0 2.89e-01 91.5% 29.3%
5048526 213.1.1.29 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_9 0.54 45.0 3.48e-01 94.9% 66.4%
3898198 220.1.1.184 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_S11IP 0.54 48.0 3.68e-01 96.6% 98.4%
4445317 9.1.1.1 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.54 44.0 3.23e-01 89.8% 39.4%
5037893 213.1.1.29 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_9 0.54 44.0 3.53e-01 94.9% 69.2%
3825435 70.3.1.1 ↗ beta barrels › beta-clip › SET domain-like › SET domain-like › SET 0.54 32.0 2.34e-01 78.0% 21.2%
5000798 3926.1.1.1 ↗ alpha bundles › V-type proton ATPase subunit D › V-type proton ATPase subunit D › V-type proton ATPase subunit D › ATP-synt_D 0.53 49.0 3.37e-01 98.3% 98.4%
3993949 284.1.1.0 ↗ a+b two layers › FKBP-like › FKBP-like › FKBP-like 0.53 33.0 3.62e-01 83.1% 84.4%
4156749 3234.1.1.2 ↗ a+b two layers › GerBC protein › GerBC protein › GerBC protein › Spore_GerAC, Spore_GerAC_N 0.51 36.0 2.43e-01 94.9% 16.1%
4961538 2002.1.1.256 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › MSH_C 0.51 42.0 2.51e-01 89.8% 12.8%
4262943 220.1.1.184 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_S11IP 0.51 45.0 3.53e-01 100.0% 98.4%
3942790 4312.1.1.0 ↗ a+b two layers › RelE-like › RelE-like › RelE-like 0.51 34.0 3.38e-01 84.7% 64.6%
3608527 216.1.1.0 ↗ a+b two layers › UBC-like › UBC-like › UBC-like 0.51 41.0 3.09e-01 96.6% 64.7%
3228122 11.1.1.1043 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF28941 0.50 36.0 2.58e-01 83.1% 28.3%
1815422 566.1.1.3 ↗ alpha complex topology › P40 nucleoprotein-like › P40 nucleoprotein-related › P40 nucleoprotein-related › Pneumo_ncap 0.50 42.0 2.84e-01 91.5% 42.3%
D2 medium residues 70-108
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4hubG01 3.30.70.1730 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein L10, N-terminal RNA-binding domain 0.73 56.0 3.63e-01 84.6% 24.1%
7myqB02 1.10.1270.20 Mainly Alpha › Orthogonal Bundle › Trp Operon Repressor; Chain A › tRNA(m1g37)methyltransferase, domain 2 0.73 53.0 4.68e-01 89.7% 54.5%
4cb8A00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.72 63.0 3.47e-01 100.0% 7.6%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3456840 4082.1.1.0 ↗ alpha duplicates or obligate multimers › Hairy Orange domain › Hairy Orange domain › Hairy Orange domain 0.79 61.0 5.78e-01 100.0% 71.1%