←Back to structures
MT521998.1__QLF84112.1__SEA_JAMBALAYA_66__00066
Bact-VirMT521998.1__QLF84112.1__SEA_JAMBALAYA_66__00066
Identity
- Accession:
- MT521998 ↗
- Kingdom:
- phage
Quality
85.6
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Stackebrandtviridae›
Wizardvirus›
Gordonia_phage_Jambalaya
TaxID: 2743985
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 12-62
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2nycA00 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.55 | 44.0 | 3.41e-01 | 96.1% | 86.2% |
| 3cbuA01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.53 | 35.0 | 3.17e-01 | 70.6% | 85.5% |
| 2posA00 | 1.10.239.10 | Mainly Alpha › Orthogonal Bundle › Beta-cryptogein › Elicitin domain | 0.53 | 41.0 | 3.50e-01 | 92.2% | 97.9% |
| 1p77A01 | 3.40.50.10860 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 | 0.51 | 36.0 | 2.73e-01 | 78.4% | 56.4% |
| 5fgzA02 | 1.10.3810.10 | Mainly Alpha › Orthogonal Bundle › Penicillin binding protein transpeptidase fold › Biosynthetic peptidoglycan transglycosylase-like | 0.50 | 34.0 | 2.42e-01 | 70.6% | 65.6% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3929219 | 109.4.1.558 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Arm_vescicular | 0.58 | 40.0 | 2.42e-01 | 74.5% | 16.0% |
| 3240184 | 282.1.1.1 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS | 0.57 | 45.0 | 3.22e-01 | 96.1% | 92.4% |
| 4939664 | 282.1.1.1 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS | 0.55 | 43.0 | 3.43e-01 | 96.1% | 86.7% |
| 5063959 | 131.1.1.0 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like | 0.55 | 39.0 | 2.43e-01 | 80.4% | 42.8% |
| 3515827 | 242.2.1.6 ↗ | a+b two layers › Homing endonucleases-like › tRNA-intron endonuclease N-terminal domain-like › tRNA-intron endonuclease N-terminal domain-like › tRNA_int_end_N2 | 0.54 | 38.0 | 3.44e-01 | 76.5% | 100.0% |
| 4949539 | 242.2.1.2 ↗ | a+b two layers › Homing endonucleases-like › tRNA-intron endonuclease N-terminal domain-like › tRNA-intron endonuclease N-terminal domain-like › tRNA_int_endo_N | 0.53 | 37.0 | 3.39e-01 | 78.4% | 97.3% |
| 5007216 | 282.1.1.0 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain | 0.52 | 40.0 | 3.29e-01 | 96.1% | 84.3% |
| 3585595 | 242.2.1.0 ↗ | a+b two layers › Homing endonucleases-like › tRNA-intron endonuclease N-terminal domain-like › tRNA-intron endonuclease N-terminal domain-like | 0.51 | 35.0 | 3.32e-01 | 76.5% | 100.0% |
| 3387534 | 282.1.1.1 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS | 0.51 | 39.0 | 3.20e-01 | 92.2% | 94.8% |
| 5010145 | 282.1.1.1 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS | 0.50 | 39.0 | 3.12e-01 | 96.1% | 80.8% |