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MT521999.1__QLF84183.1__SEA_JABLANSKI_43__00043

Bact-Vir

MT521999.1__QLF84183.1__SEA_JABLANSKI_43__00043

Identity

Accession:
MT521999 ↗
Kingdom:
phage

Quality

90.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 13-281
PDB
CATH (59)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1uwvA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.79 49.0 5.56e-01 92.6% 80.2%
4qdjA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.77 49.0 5.57e-01 92.9% 81.7%
3v97B04 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.76 49.0 5.70e-01 92.9% 87.1%
1jsxA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.74 42.0 4.91e-01 99.3% 76.7%
3tmaA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.73 46.0 5.64e-01 92.9% 94.9%
2b78A03 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.73 50.0 5.68e-01 92.6% 89.4%
2as0A03 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.73 52.0 5.72e-01 92.9% 88.5%
2igtA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.72 53.0 5.54e-01 92.9% 81.0%
3mggB01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.72 44.0 5.50e-01 92.9% 98.8%
3c0kA03 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.71 51.0 5.64e-01 92.6% 89.7%
3ua3A02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.71 41.0 5.12e-01 91.4% 88.4%
1dl5A01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.71 42.0 4.89e-01 85.9% 78.6%
8k1fC01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.70 50.0 5.81e-01 92.2% 98.5%
3g88A00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.70 45.0 4.78e-01 92.9% 71.1%
1j4wA01 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.70 19.0 3.77e-01 100.0% 86.5%
5x7fA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.70 49.0 5.66e-01 92.2% 96.5%
2mq8A00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.69 20.0 3.19e-01 100.0% 60.7%
4krgA02 3.40.50.12180 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.69 48.0 5.45e-01 91.4% 92.7%
2qndA02 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.68 20.0 3.78e-01 100.0% 87.5%
4kigA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.68 45.0 5.46e-01 81.4% 100.0%
3dr5A00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.67 51.0 5.69e-01 93.3% 96.8%
2b9eA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.67 48.0 5.58e-01 92.6% 100.0%
3c3pA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.66 48.0 5.60e-01 93.3% 100.0%
3q3eA03 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.66 36.0 4.18e-01 88.8% 72.3%
2avdA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.66 51.0 5.66e-01 92.9% 97.7%
3ajdA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.66 45.0 5.25e-01 97.0% 95.4%
4pcaB00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.66 52.0 5.72e-01 92.9% 99.5%
3i3wA04 3.30.310.50 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain 0.65 19.0 3.39e-01 100.0% 81.8%
3ocjA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.65 50.0 4.85e-01 92.9% 71.0%
1jqdA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.65 57.0 5.63e-01 92.9% 94.4%
4m88A02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.65 36.0 4.76e-01 91.8% 100.0%
1kjnA00 3.40.50.10160 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › MTH777-like 0.64 35.0 4.53e-01 96.3% 91.4%
3axsA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.64 61.0 5.70e-01 100.0% 90.1%
2rbgA00 3.40.50.11100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.63 32.0 4.44e-01 81.8% 100.0%
1yzhB00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.63 41.0 4.67e-01 83.3% 85.0%
3bguA01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.63 19.0 3.25e-01 100.0% 74.0%
4zeoH02 3.40.50.10470 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Translation initiation factor eif-2b; domain 2 0.63 38.0 4.83e-01 98.9% 100.0%
3lkdA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.62 52.0 5.17e-01 100.0% 83.7%
1b2rA02 3.40.50.80 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module 0.61 38.0 4.71e-01 93.3% 97.6%
3loqA02 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.61 31.0 4.31e-01 91.4% 100.0%
2vdwG00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.60 53.0 5.34e-01 92.9% 94.9%
3i6iA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.60 41.0 4.80e-01 89.6% 98.4%
1xxlA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.59 49.0 5.27e-01 91.8% 99.1%
3ksuB00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.59 47.0 5.13e-01 93.3% 100.0%
3d03A01 3.60.21.40 Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › GpdQ, catalytic alpha/beta sandwich domain 0.58 27.0 3.78e-01 94.8% 87.8%
1vdhA01 3.30.70.1030 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Apc35880; domain 1 0.57 18.0 2.66e-01 91.1% 57.9%
2lciA00 3.40.50.11230 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.56 29.0 3.88e-01 87.0% 94.0%
3g5tA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.55 48.0 4.66e-01 91.8% 94.0%
2frxB01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.55 49.0 4.75e-01 92.9% 91.7%
4impA03 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.55 45.0 4.66e-01 93.7% 90.6%
5izdA01 3.40.605.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 0.54 37.0 3.66e-01 96.7% 62.7%
5iz4A00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.54 46.0 4.81e-01 90.3% 98.8%
7yosA01 3.90.1640.30 Alpha Beta › Alpha-Beta Complex › inorganic pyrophosphatase (n-terminal core) › 0.54 30.0 3.55e-01 99.3% 75.9%
1yacA00 3.40.50.850 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Isochorismatase-like 0.52 37.0 4.12e-01 92.6% 92.2%
4impA02 3.40.50.11460 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.52 36.0 4.00e-01 92.6% 87.7%
5u4qB00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.52 44.0 4.28e-01 90.0% 94.7%
3cb2B01 3.40.50.1440 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tubulin/FtsZ, GTPase domain 0.52 43.0 4.37e-01 87.4% 96.6%
1khmA00 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.51 16.0 2.68e-01 95.2% 75.3%
1k1gA00 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.51 23.0 3.20e-01 98.9% 86.9%
ECOD (73)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3956202 2003.1.5.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.87 82.0 8.08e-01 100.0% 92.6%
4973581 2003.1.5.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.86 82.0 8.05e-01 100.0% 93.0%
5050214 2003.1.5.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.85 83.0 7.87e-01 100.0% 94.4%
4029370 2003.1.5.53 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › tRNA_U5-meth_tr 0.79 53.0 4.43e-01 92.6% 41.6%
4076202 2003.1.5.53 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › tRNA_U5-meth_tr 0.77 49.0 4.25e-01 92.9% 43.2%
4185072 2003.1.5.53 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › tRNA_U5-meth_tr 0.77 49.0 4.48e-01 93.3% 49.7%
4028975 2003.1.5.69 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › GCD14 0.76 49.0 5.67e-01 92.9% 87.2%
4475713 2003.1.5.55 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › PrmA 0.75 48.0 5.44e-01 92.6% 81.4%
4612674 2003.1.5.53 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › tRNA_U5-meth_tr 0.75 49.0 4.25e-01 94.1% 44.0%
None 0.75 47.0 5.32e-01 92.9% 81.3%
3993374 2003.1.5.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.74 36.0 5.07e-01 88.5% 92.6%
3313712 2003.1.5.32 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Cons_hypoth95 0.73 49.0 5.07e-01 95.9% 70.2%
3271719 2003.1.5.408 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › KR 0.72 56.0 4.50e-01 91.1% 42.2%
4002275 2003.1.5.53 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › tRNA_U5-meth_tr 0.72 50.0 4.22e-01 92.6% 43.7%
3234357 2003.1.5.47 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › PRMT5 0.72 42.0 4.91e-01 91.4% 78.5%
3699720 2003.1.5.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.72 48.0 5.58e-01 92.6% 91.7%
4091052 2003.1.5.2 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › RrnaAD 0.72 49.0 5.54e-01 92.9% 88.8%
3513861 304.162.1.0 a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain 0.72 19.0 3.63e-01 99.3% 77.5%
3274953 2003.1.1.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.71 54.0 3.71e-01 91.1% 23.6%
3616172 304.162.1.2 a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › FLAD1_M 0.71 20.0 3.67e-01 99.6% 80.0%
3211626 304.162.1.2 a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › FLAD1_M 0.70 19.0 3.52e-01 99.6% 75.3%
3378678 327.11.2.1 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 0.70 20.0 3.66e-01 100.0% 80.0%
3941002 2003.1.5.53 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › tRNA_U5-meth_tr 0.69 52.0 4.33e-01 92.2% 46.3%
3228492 327.11.2.1 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 0.68 19.0 3.54e-01 100.0% 78.8%
3661545 327.11.2.1 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 0.68 20.0 3.28e-01 100.0% 68.0%
None 0.68 52.0 5.69e-01 92.9% 93.8%
3756621 327.11.2.1 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 0.68 19.0 3.59e-01 100.0% 82.5%
4078660 2003.1.5.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.67 47.0 5.49e-01 91.4% 97.4%
3798411 327.11.2.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.67 19.0 3.46e-01 100.0% 77.6%
3911484 327.11.2.1 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 0.67 19.0 3.44e-01 100.0% 77.6%
3314514 2003.1.5.31 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › GRAS 0.66 59.0 5.08e-01 92.9% 70.4%
3913774 2003.1.5.19 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › TRM 0.66 63.0 4.99e-01 100.0% 86.9%
3293660 2003.1.5.31 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › GRAS 0.66 59.0 5.09e-01 92.6% 73.1%
3164399 2003.1.5.66 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 0.66 54.0 5.65e-01 92.2% 92.2%
4606743 2003.1.5.35 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › LCM 0.66 54.0 5.27e-01 92.6% 78.2%
4395482 2003.1.5.19 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › TRM 0.65 62.0 5.34e-01 100.0% 75.2%
4030467 2003.1.5.19 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › TRM 0.65 61.0 5.21e-01 100.0% 73.3%
3345277 2003.1.5.31 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › GRAS 0.64 57.0 4.95e-01 92.9% 72.8%
3602141 2003.1.5.19 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › TRM 0.64 61.0 5.41e-01 100.0% 75.7%
4318391 2003.1.5.19 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › TRM 0.64 61.0 5.30e-01 100.0% 74.4%
5078363 2003.1.5.19 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › TRM 0.64 61.0 5.29e-01 100.0% 85.4%
3292135 2003.1.5.31 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › GRAS 0.64 56.0 4.81e-01 92.2% 68.7%
3433514 2003.1.5.30 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_7 0.64 56.0 5.02e-01 92.9% 93.9%
3947532 2005.1.1.0 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.64 31.0 4.41e-01 88.8% 100.0%
None 0.63 47.0 5.38e-01 92.6% 100.0%
3881151 2006.1.1.41 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › 5-nucleotidase 0.63 31.0 4.45e-01 86.2% 100.0%
3274805 2003.1.5.67 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_12 0.63 51.0 5.14e-01 91.4% 83.5%
4012937 2003.1.5.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.62 52.0 5.34e-01 92.2% 91.4%
4565957 2003.1.5.22 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_Mtase 0.61 51.0 5.18e-01 99.3% 87.9%
4661047 2003.1.5.42 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_21 0.61 54.0 5.42e-01 94.8% 90.5%
4255519 2003.1.5.22 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_Mtase 0.61 53.0 4.88e-01 100.0% 72.6%
3300451 2006.1.1.52 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › PF28688 0.60 35.0 4.47e-01 87.4% 96.8%
3656886 2003.1.5.82 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_31 0.60 50.0 4.01e-01 92.6% 46.1%
9408 2003.1.5.74 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltrans_SAM 0.59 53.0 5.08e-01 92.9% 92.5%
4030028 2003.1.5.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.59 52.0 4.69e-01 92.9% 86.3%
3266455 2003.1.5.74 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltrans_SAM 0.59 52.0 4.69e-01 93.3% 90.7%
4974055 2003.1.5.35 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › LCM 0.58 51.0 4.66e-01 92.2% 80.6%
3825336 2003.1.5.74 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltrans_SAM 0.57 51.0 4.72e-01 92.9% 88.9%
3457716 2003.1.5.30 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_7 0.57 46.0 4.88e-01 91.4% 93.3%
3602886 2003.1.5.82 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_31 0.57 50.0 4.78e-01 92.6% 90.8%
4395892 2003.1.5.54 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_10 0.57 48.0 4.49e-01 94.4% 72.4%
3467359 2003.1.5.6 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltr_RsmB-F 0.56 49.0 4.26e-01 92.9% 78.8%
5022261 2003.1.5.6 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltr_RsmB-F 0.55 49.0 4.68e-01 92.9% 87.8%
4864355 2488.1.1.13 a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › Methyltrn_RNA_4 0.55 32.0 4.02e-01 89.6% 92.8%
4639416 2003.1.5.74 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltrans_SAM 0.55 49.0 4.49e-01 93.3% 85.3%
4159149 2004.1.1.96 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › RsgA_GTPase 0.54 34.0 3.70e-01 92.9% 72.4%
4030913 2004.1.1.107 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DnaB_C 0.54 44.0 4.48e-01 98.9% 87.6%
4678670 304.5.1.7 a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 0.53 15.0 2.69e-01 76.2% 76.2%
4202913 2003.1.5.54 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_10 0.53 47.0 4.46e-01 94.4% 86.2%
3515728 2003.1.5.53 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › tRNA_U5-meth_tr 0.53 40.0 2.94e-01 76.6% 59.5%
3420720 7516.1.1.79 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_trans_2_3 0.52 41.0 3.27e-01 82.2% 82.6%
3468884 7516.1.1.79 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_trans_2_3 0.51 41.0 3.26e-01 80.7% 73.7%
3887399 2003.1.5.73 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_16 0.51 47.0 4.53e-01 99.6% 93.2%
D2 high residues 296-370
PDB
Domain cluster: representative
CATH (25)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4kmfA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 55.0 5.94e-01 92.0% 95.2%
3g3zA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 56.0 5.99e-01 88.0% 93.8%
3o2pE00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 64.0 6.14e-01 98.7% 83.7%
3bz6A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 58.0 5.80e-01 89.3% 84.6%
3dplC03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 62.0 6.05e-01 98.7% 88.0%
3l7wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 58.0 5.20e-01 96.0% 64.8%
6qpqB00 1.10.10.580 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Structural maintenance of chromosome 1. Chain E 0.69 58.0 5.70e-01 92.0% 87.7%
2do7A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 56.0 5.51e-01 97.3% 86.3%
2co5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 54.0 5.09e-01 93.3% 72.8%
1bm9A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 57.0 4.80e-01 93.3% 63.3%
3mwmA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 52.0 5.25e-01 92.0% 89.3%
2o5hA00 1.10.3510.10 Mainly Alpha › Orthogonal Bundle › NMB0513-like › NMB0513-like 0.64 56.0 4.78e-01 100.0% 82.8%
1u5tB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 54.0 5.20e-01 97.3% 98.8%
1q6aA00 1.10.1240.30 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › KaiA/RbsU domain 0.60 51.0 4.60e-01 96.0% 83.2%
3nrwA00 1.10.150.130 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain 0.60 48.0 4.33e-01 88.0% 76.0%
3kd4A02 3.10.620.30 Alpha Beta › Roll › C8orf32 fold › 0.60 49.0 3.92e-01 93.3% 77.5%
3d7iB00 1.20.1290.10 Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like 0.58 46.0 4.29e-01 94.7% 67.3%
1ithA00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.56 47.0 3.94e-01 97.3% 72.3%
1khdA01 1.20.970.10 Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 0.56 39.0 3.52e-01 81.3% 54.0%
1lxlA00 1.10.437.10 Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like 0.56 46.0 3.40e-01 94.7% 38.5%
3zxsC02 1.25.40.80 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.54 46.0 3.69e-01 96.0% 55.2%
2gmyD00 1.20.1290.10 Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like 0.53 39.0 3.25e-01 80.0% 75.2%
2kd1A00 1.10.150.130 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain 0.53 45.0 3.92e-01 94.7% 66.1%
1ldjA04 1.20.1310.10 Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats 0.51 42.0 3.69e-01 92.0% 61.7%
4bszB00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.50 41.0 3.39e-01 94.7% 54.7%
ECOD (64)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4025625 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 62.0 6.50e-01 100.0% 94.2%
5011344 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.76 61.0 6.50e-01 88.0% 98.5%
5011499 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 60.0 6.34e-01 90.7% 98.5%
3595754 101.1.2.127 alpha arrays › HTH › HTH › winged helix domain › Cullin_Nedd8 0.74 63.0 6.08e-01 98.7% 81.2%
3739861 101.1.2.198 alpha arrays › HTH › HTH › winged helix domain › ORC1_wHTH 0.74 61.0 5.25e-01 89.3% 73.0%
3935353 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 64.0 6.23e-01 98.7% 85.5%
3174373 101.1.2.780 alpha arrays › HTH › HTH › winged helix domain › PF31199 0.74 65.0 6.56e-01 100.0% 96.0%
4965014 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 60.0 6.21e-01 92.0% 94.3%
3716703 101.1.2.127 alpha arrays › HTH › HTH › winged helix domain › Cullin_Nedd8 0.73 65.0 6.54e-01 98.7% 96.0%
3609557 101.1.2.127 alpha arrays › HTH › HTH › winged helix domain › Cullin_Nedd8 0.73 61.0 5.66e-01 97.3% 71.6%
3788865 101.1.2.374 alpha arrays › HTH › HTH › winged helix domain › MCM4_WHD 0.73 64.0 6.25e-01 97.3% 90.0%
3891461 101.1.2.606 alpha arrays › HTH › HTH › winged helix domain › RPC5_C 0.73 53.0 5.12e-01 93.3% 68.2%
3705220 101.1.2.127 alpha arrays › HTH › HTH › winged helix domain › Cullin_Nedd8 0.73 65.0 6.25e-01 100.0% 85.9%
4978321 101.1.2.57 alpha arrays › HTH › HTH › winged helix domain › EAP30 0.73 66.0 6.18e-01 100.0% 95.6%
3958566 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.72 57.0 5.36e-01 88.0% 70.0%
4968340 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 60.0 5.66e-01 98.7% 75.6%
3501700 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 55.0 5.45e-01 94.7% 77.5%
5000260 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 59.0 4.51e-01 89.3% 41.2%
3497764 101.1.2.127 alpha arrays › HTH › HTH › winged helix domain › Cullin_Nedd8 0.72 64.0 6.03e-01 98.7% 82.0%
3897679 148.1.3.361 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › WH_MCM3_C 0.71 56.0 5.95e-01 92.0% 98.5%
4009179 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 59.0 5.55e-01 89.3% 74.4%
3250041 101.1.2.525 alpha arrays › HTH › HTH › winged helix domain › DUF7646 0.71 61.0 4.28e-01 93.3% 34.2%
4026719 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 64.0 5.35e-01 98.7% 62.4%
3593172 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 59.0 5.68e-01 98.7% 80.0%
4022486 101.1.2.374 alpha arrays › HTH › HTH › winged helix domain › MCM4_WHD 0.71 63.0 5.94e-01 98.7% 84.4%
3598367 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 63.0 5.84e-01 98.7% 78.5%
3597746 101.1.2.127 alpha arrays › HTH › HTH › winged helix domain › Cullin_Nedd8 0.71 62.0 6.14e-01 97.3% 90.0%
4995581 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.71 60.0 5.37e-01 90.7% 69.0%
3608085 101.1.2.127 alpha arrays › HTH › HTH › winged helix domain › Cullin_Nedd8 0.71 63.0 5.88e-01 100.0% 78.7%
4928394 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 55.0 5.85e-01 90.7% 97.0%
4988076 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 57.0 5.92e-01 96.0% 97.1%
4640327 101.1.2.25 alpha arrays › HTH › HTH › winged helix domain › FUR 0.70 56.0 4.65e-01 89.3% 50.0%
5028427 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.69 58.0 5.13e-01 96.0% 64.8%
3497894 101.1.2.374 alpha arrays › HTH › HTH › winged helix domain › MCM4_WHD 0.69 59.0 5.75e-01 98.7% 85.5%
4426239 101.1.2.22 alpha arrays › HTH › HTH › winged helix domain › PCI 0.69 58.0 4.72e-01 97.3% 49.0%
4125762 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.68 57.0 4.72e-01 96.0% 52.3%
5000704 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 59.0 5.61e-01 98.7% 81.1%
4944051 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 57.0 4.37e-01 92.0% 41.2%
3613393 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 56.0 5.54e-01 94.7% 85.0%
5046208 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.67 55.0 5.53e-01 97.3% 90.7%
3592443 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.67 58.0 4.63e-01 97.3% 59.4%
4969224 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.67 51.0 5.49e-01 92.0% 93.8%
3206342 101.1.2.22 alpha arrays › HTH › HTH › winged helix domain › PCI 0.67 57.0 5.77e-01 97.3% 96.0%
4002798 101.1.2.22 alpha arrays › HTH › HTH › winged helix domain › PCI 0.67 53.0 5.46e-01 92.0% 92.9%
3958889 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.67 54.0 4.12e-01 88.0% 38.8%
4625029 101.1.2.88 alpha arrays › HTH › HTH › winged helix domain › Dimerisation 0.66 54.0 4.86e-01 89.3% 64.8%
1141998 101.1.2.22 alpha arrays › HTH › HTH › winged helix domain › PCI 0.66 56.0 5.60e-01 97.3% 92.4%
3225058 101.1.2.566 alpha arrays › HTH › HTH › winged helix domain › CDT1, CDT1_C 0.66 58.0 3.83e-01 100.0% 24.3%
3890162 101.1.2.526 alpha arrays › HTH › HTH › winged helix domain › PF27602 0.66 55.0 5.55e-01 93.3% 92.0%
164077 101.1.2.127 alpha arrays › HTH › HTH › winged helix domain › Cullin_Nedd8 0.66 56.0 5.12e-01 100.0% 71.3%
3217591 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.66 57.0 5.32e-01 98.7% 85.3%
4973555 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.65 58.0 4.43e-01 100.0% 43.5%
3740979 101.1.2.374 alpha arrays › HTH › HTH › winged helix domain › MCM4_WHD 0.65 56.0 5.03e-01 97.3% 90.5%
3279756 101.1.2.25 alpha arrays › HTH › HTH › winged helix domain › FUR 0.64 54.0 4.44e-01 100.0% 50.7%
3414623 101.1.2.566 alpha arrays › HTH › HTH › winged helix domain › CDT1, CDT1_C 0.62 53.0 3.63e-01 98.7% 25.8%
5080760 101.1.2.894 alpha arrays › HTH › HTH › winged helix domain › DUF2240 0.61 45.0 4.25e-01 88.0% 65.6%
4997248 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.58 50.0 4.62e-01 100.0% 82.0%
3315608 185.1.1.1 alpha superhelices › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin-like › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin/Protein HNS-dependent expression A HdeA › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin › Tryp_alpha_amyl 0.54 46.0 4.20e-01 98.7% 83.8%
4411140 563.1.1.1 alpha bundles › ATPD N-terminal domain-like › N-terminal domain of the delta subunit of the F1F0-ATP synthase › N-terminal domain of the delta subunit of the F1F0-ATP synthase › OSCP 0.53 39.0 3.68e-01 81.3% 67.4%
3995866 210.1.3.1 a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_2 0.52 44.0 3.22e-01 93.3% 66.3%
3676670 109.4.1.1254 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif 0.52 42.0 2.78e-01 96.0% 21.3%
3448346 509.1.1.1 alpha bundles › PAH2 domain › PAH2 domain › PAH2 domain › PAH 0.52 37.0 3.71e-01 96.0% 74.7%
3238086 109.3.1.0 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.51 40.0 2.91e-01 89.3% 48.0%
3602955 4981.1.1.1 alpha arrays › YfbU-like, C-terminal subdomain › YfbU-like, C-terminal subdomain › YfbU-like, C-terminal subdomain › YfbU 0.51 42.0 3.69e-01 94.7% 70.3%