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MT521999.1__QLF84213.1__SEA_JABLANSKI_73__00073
Bact-VirMT521999.1__QLF84213.1__SEA_JABLANSKI_73__00073
Identity
- Accession:
- MT521999 ↗
- Kingdom:
- phage
Quality
82.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 15-89
Domain cluster:
rep: S2_012_000_R2_scaffold_0_prodigal-single.1__X__X__00803__D8-94
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1yd0A00 | 3.40.1440.10 | Alpha Beta › 3-Layer(aba) Sandwich › GIY-YIG endonuclease › GIY-YIG endonuclease | 0.90 | 78.0 | 7.35e-01 | 92.0% | 83.1% |
| 1ln0A00 | 3.40.1440.10 | Alpha Beta › 3-Layer(aba) Sandwich › GIY-YIG endonuclease › GIY-YIG endonuclease | 0.78 | 69.0 | 6.42e-01 | 97.3% | 98.9% |
| 5fmvA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.73 | 45.0 | 4.31e-01 | 73.3% | 54.8% |
| 1i1gA02 | 3.30.70.920 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain | 0.60 | 41.0 | 4.15e-01 | 72.0% | 100.0% |
| 2rs7A01 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.56 | 31.0 | 3.14e-01 | 85.3% | 54.1% |
| 3egrA00 | 3.10.20.520 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phenylacetic acid degradation B | 0.56 | 40.0 | 4.28e-01 | 77.3% | 88.9% |
| 3pm9A03 | 3.30.70.2190 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 45.0 | 3.85e-01 | 90.7% | 75.2% |
| 8d8lF01 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.51 | 41.0 | 3.49e-01 | 86.7% | 76.4% |
| 1vw3C02 | 3.30.160.810 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.51 | 34.0 | 3.62e-01 | 84.0% | 77.6% |
| 3nwgA02 | 3.30.70.1710 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › BMC (bacterial microcompartment) domain | 0.50 | 42.0 | 3.79e-01 | 90.7% | 70.3% |
ECOD (30)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4236834 | 821.1.1.1 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG | 0.94 | 84.0 | 8.04e-01 | 94.7% | 90.6% |
| 3986774 | 821.1.1.9 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › PF30054 | 0.92 | 82.0 | 7.37e-01 | 94.7% | 76.0% |
| 4947741 | 821.1.1.17 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › PF27096 | 0.92 | 80.0 | 7.64e-01 | 92.0% | 88.2% |
| 4515517 | 821.1.1.9 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › PF30054 | 0.90 | 80.0 | 7.49e-01 | 94.7% | 87.8% |
| 4945828 | 821.1.1.0 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease | 0.90 | 80.0 | 7.49e-01 | 94.7% | 88.9% |
| 5052958 | 821.1.1.0 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease | 0.90 | 76.0 | 7.48e-01 | 92.0% | 83.7% |
| 4170310 | 821.1.1.9 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › PF30054 | 0.90 | 78.0 | 7.28e-01 | 92.0% | 86.7% |
| 4468826 | 821.1.1.9 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › PF30054 | 0.90 | 79.0 | 7.18e-01 | 93.3% | 81.1% |
| 4111785 | 821.1.1.9 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › PF30054 | 0.90 | 79.0 | 7.21e-01 | 93.3% | 81.1% |
| 4457400 | 821.1.1.9 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › PF30054 | 0.89 | 83.0 | 7.33e-01 | 100.0% | 79.0% |
| 4977317 | 821.1.1.9 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › PF30054 | 0.89 | 77.0 | 6.47e-01 | 92.0% | 64.7% |
| 4310838 | 821.1.1.9 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › PF30054 | 0.88 | 78.0 | 7.46e-01 | 94.7% | 90.6% |
| 4054044 | 821.1.1.9 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › PF30054 | 0.85 | 79.0 | 7.11e-01 | 100.0% | 87.0% |
| 4974405 | 821.1.1.0 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease | 0.85 | 80.0 | 7.44e-01 | 100.0% | 87.8% |
| 3588392 | 821.1.1.9 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › PF30054 | 0.85 | 78.0 | 6.97e-01 | 98.7% | 82.0% |
| 4994096 | 821.1.1.0 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease | 0.83 | 77.0 | 6.84e-01 | 100.0% | 82.7% |
| 4929079 | 821.1.1.15 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › DUF7508 | 0.83 | 72.0 | 6.62e-01 | 93.3% | 77.7% |
| 5039344 | 821.1.1.0 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease | 0.82 | 73.0 | 7.01e-01 | 96.0% | 83.5% |
| 5070409 | 821.1.1.0 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease | 0.81 | 69.0 | 6.57e-01 | 93.3% | 89.8% |
| 4186535 | 821.1.1.9 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › PF30054 | 0.76 | 67.0 | 5.90e-01 | 93.3% | 100.0% |
| 4981868 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.62 | 43.0 | 4.07e-01 | 72.0% | 88.9% |
| 4041707 | 304.4.1.1 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg | 0.61 | 44.0 | 4.05e-01 | 76.0% | 85.0% |
| 4873862 | 866.1.1.1 ↗ | a+b duplicates or obligate multimers › CheC-like › CheC-like › CheC-like › FliM | 0.60 | 46.0 | 3.69e-01 | 82.7% | 62.0% |
| 5035856 | 2484.2.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Methylated DNA-protein cysteine methyltransferase domain › Methylated DNA-protein cysteine methyltransferase domain | 0.59 | 46.0 | 4.64e-01 | 100.0% | 86.7% |
| 4945582 | 304.17.1.0 ↗ | a+b two layers › Alpha-beta plaits › N-utilization substance G protein NusG, N-terminal domain › N-utilization substance G protein NusG, N-terminal domain | 0.57 | 39.0 | 4.09e-01 | 73.3% | 100.0% |
| 3390562 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.56 | 38.0 | 3.95e-01 | 77.3% | 77.1% |
| 5070847 | 304.4.1.1 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg | 0.55 | 41.0 | 4.04e-01 | 80.0% | 100.0% |
| 3417568 | 245.1.1.0 ↗ | a+b two layers › Ribonuclease PH domain 2-like › Ribonuclease PH domain 2 › Ribonuclease PH domain 2 | 0.51 | 37.0 | 3.36e-01 | 77.3% | 79.6% |
| 4983492 | 304.128.1.0 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in periplasmic region of MacB › ferredoxin-like domain in periplasmic region of MacB | 0.50 | 42.0 | 3.96e-01 | 90.7% | 76.7% |
| 3663319 | 2492.1.1.2 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › JAB | 0.50 | 42.0 | 3.25e-01 | 100.0% | 77.9% |