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MT522004.1__QLF84567.1__SEA_GAIL_2__00002
Bact-VirMT522004.1__QLF84567.1__SEA_GAIL_2__00002
Identity
- Accession:
- MT522004 ↗
- Kingdom:
- phage
Quality
80.2
mean pLDDT
Taxonomy
TaxID: 2743994
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 279-345
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3c1dA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 35.0 | 3.96e-01 | 91.0% | 80.4% |
| 3nrwA00 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.59 | 47.0 | 4.22e-01 | 94.0% | 91.3% |
| 3lfuA02 | 1.10.10.160 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.57 | 46.0 | 4.60e-01 | 97.0% | 87.1% |
| 1pyvA00 | 1.10.10.910 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › ATP synthase, F1 beta subunit | 0.56 | 36.0 | 3.89e-01 | 70.1% | 83.0% |
| 3t9oB00 | 1.20.120.30 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Aspartate receptor, ligand-binding domain | 0.54 | 40.0 | 3.41e-01 | 82.1% | 70.0% |
| 1y4cA03 | 1.20.120.660 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › IL-4 antagonist (De novo design) like domain | 0.53 | 42.0 | 3.58e-01 | 88.1% | 61.9% |
| 5n17A01 | 1.20.920.10 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like | 0.53 | 44.0 | 3.90e-01 | 95.5% | 91.3% |
| 1a62A01 | 1.10.720.10 | Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › | 0.53 | 31.0 | 3.69e-01 | 89.6% | 87.0% |
| 4yjwA00 | 1.20.120.930 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Uncharacterised protein PF12889, N-terminal DUF3829 | 0.52 | 40.0 | 3.21e-01 | 88.1% | 58.2% |
| 2wl8C00 | 1.20.120.900 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Pex19, mPTS binding domain | 0.52 | 44.0 | 3.86e-01 | 100.0% | 80.7% |
| 1yfmA01 | 1.10.275.10 | Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) | 0.50 | 42.0 | 3.55e-01 | 98.5% | 65.1% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3238661 | 2007.5.1.23 ↗ | a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › SGNH | 0.63 | 42.0 | 2.83e-01 | 70.1% | 29.8% |
| 3361880 | 101.1.17.41 ↗ | alpha arrays › HTH › HTH › FF domain › AdoHcyase | 0.59 | 43.0 | 3.88e-01 | 79.1% | 69.5% |
| 4969920 | 601.7.1.2 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › HEPN | 0.57 | 43.0 | 3.50e-01 | 82.1% | 74.6% |
| 3386454 | 601.18.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Oxygen-evolving enhancer protein 3 › Oxygen-evolving enhancer protein 3 | 0.55 | 43.0 | 3.83e-01 | 88.1% | 68.0% |
| 3914294 | 189.1.1.2 ↗ | alpha bundles › GTPase activation domain, GAP › GTPase activation domain, GAP › GTPase activation domain, GAP › RhoGAP | 0.54 | 37.0 | 2.66e-01 | 73.1% | 78.6% |
| 2426527 | 2002.1.1.29 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHDPS | 0.53 | 42.0 | 2.81e-01 | 89.6% | 26.5% |
| 3978380 | 5069.1.1.0 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes | 0.51 | 40.0 | 3.25e-01 | 91.0% | 57.2% |
| 5043455 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.51 | 41.0 | 2.81e-01 | 94.0% | 48.2% |
| 3185917 | 375.1.9.12 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Zinc-nucleated domain of serine integrase › Wbp11 | 0.50 | 31.0 | 2.89e-01 | 91.0% | 49.4% |
D2
medium
residues 91-278
Domain cluster:
rep: ON453893.1__WAK78945.1__X__00024__D452-629
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF15644.13 best | Gln_amidase | 58.9 | 1.30e-15 | 58.5% | 97.3% |