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MT536174.2__QKW95585.1__AXL3_34__00034
Bact-VirMT536174.2__QKW95585.1__AXL3_34__00034
Identity
- Accession:
- MT536174 ↗
- Kingdom:
- phage
Quality
67.1
mean pLDDT
Taxonomy
TaxID: 2740427
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-66
Domain cluster:
representative
CATH (36)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4a0gC03 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.70 | 53.0 | 3.60e-01 | 83.1% | 77.7% |
| 2i0zA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.61 | 52.0 | 3.51e-01 | 96.9% | 83.1% |
| 2zhgA00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.61 | 46.0 | 3.78e-01 | 81.5% | 46.3% |
| 2l9dA00 | 3.30.70.2340 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Uncharacterised protein PF12112 family, DUF3579 | 0.61 | 46.0 | 3.87e-01 | 80.0% | 61.1% |
| 5i41B00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.61 | 45.0 | 4.52e-01 | 81.5% | 88.1% |
| 1b24A01 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.60 | 44.0 | 3.96e-01 | 80.0% | 67.4% |
| 1vw4700 | 3.30.780.10 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain | 0.59 | 44.0 | 3.78e-01 | 81.5% | 54.7% |
| 1wihA00 | 3.30.1360.40 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.59 | 46.0 | 4.27e-01 | 100.0% | 67.9% |
| 3nftA00 | 1.20.1710.10 | Mainly Alpha › Up-down Bundle › IpaD-like › IpaD-like | 0.59 | 46.0 | 3.14e-01 | 87.7% | 92.7% |
| 1cc8A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 38.0 | 3.76e-01 | 78.5% | 61.1% |
| 4oseB00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.58 | 47.0 | 3.14e-01 | 90.8% | 69.7% |
| 2cw7A02 | 1.10.10.1010 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Intein homing endonuclease, domain IV | 0.58 | 42.0 | 3.26e-01 | 78.5% | 66.4% |
| 1rv9A00 | 3.60.140.10 | Alpha Beta › 4-Layer Sandwich › CNF1/YfiH-like putative cysteine hydrolases › CNF1/YfiH-like putative cysteine hydrolases | 0.58 | 49.0 | 3.35e-01 | 96.9% | 43.0% |
| 3kdgA02 | 3.30.1370.100 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › MutL, C-terminal domain, regulatory subdomain | 0.57 | 42.0 | 3.79e-01 | 80.0% | 75.5% |
| 4toiA01 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.57 | 49.0 | 3.65e-01 | 100.0% | 94.9% |
| 3etbL00 | 2.60.40.810 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.55 | 42.0 | 3.34e-01 | 84.6% | 44.8% |
| 4iu9A00 | 1.20.1250.20 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains | 0.55 | 40.0 | 2.50e-01 | 78.5% | 37.1% |
| 3hwcA03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.55 | 39.0 | 2.85e-01 | 78.5% | 47.1% |
| 1bjaA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 37.0 | 3.32e-01 | 70.8% | 72.6% |
| 2wnyA00 | 3.30.1440.10 | Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 | 0.54 | 40.0 | 3.21e-01 | 83.1% | 38.7% |
| 1w5sA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 40.0 | 3.56e-01 | 84.6% | 83.5% |
| 5d8cA00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.54 | 46.0 | 3.80e-01 | 100.0% | 76.2% |
| 1a7jA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 38.0 | 2.54e-01 | 75.4% | 96.1% |
| 1gmnA01 | 3.50.4.10 | Alpha Beta › 3-Layer(bba) Sandwich › Hepatocyte Growth Factor › Hepatocyte Growth Factor | 0.53 | 40.0 | 3.67e-01 | 81.5% | 60.2% |
| 3c4nA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.53 | 42.0 | 2.98e-01 | 90.8% | 28.2% |
| 3pjxA01 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.53 | 38.0 | 2.81e-01 | 76.9% | 34.3% |
| 1usmA00 | 3.30.1360.20 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Transcriptional coactivator/pterin dehydratase | 0.53 | 42.0 | 4.01e-01 | 93.8% | 72.7% |
| 4h5bA00 | 3.30.1460.70 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.53 | 45.0 | 3.51e-01 | 98.5% | 88.8% |
| 1vi6C01 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.53 | 42.0 | 3.14e-01 | 92.3% | 90.4% |
| 4ba0A02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.52 | 39.0 | 2.51e-01 | 84.6% | 100.0% |
| 1t94B02 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.52 | 36.0 | 3.03e-01 | 87.7% | 40.3% |
| 3mahA02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.52 | 35.0 | 3.54e-01 | 75.4% | 69.6% |
| 3ossD00 | 3.30.1370.120 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.51 | 40.0 | 3.00e-01 | 83.1% | 96.2% |
| 1fnnB03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 38.0 | 3.35e-01 | 84.6% | 100.0% |
| 2mzwA01 | 3.30.70.870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 | 0.51 | 35.0 | 3.34e-01 | 72.3% | 68.4% |
| 2fwrA01 | 3.40.1170.30 | Alpha Beta › 3-Layer(aba) Sandwich › MutS, DNA mismatch repair protein, domain I › | 0.50 | 32.0 | 3.45e-01 | 78.5% | 75.4% |
ECOD (31)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4210423 | 313.1.1.1 ↗ | a+b complex topology › Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain › Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain › Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain › MurB_C | 0.62 | 47.0 | 3.58e-01 | 81.5% | 33.8% |
| 3687436 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.62 | 52.0 | 3.66e-01 | 100.0% | 71.1% |
| 1405791 | 327.16.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system | 0.62 | 43.0 | 4.35e-01 | 75.4% | 73.4% |
| None | — | 0.62 | 45.0 | 2.91e-01 | 80.0% | 34.8% | |
| 4096952 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.62 | 52.0 | 4.34e-01 | 93.8% | 53.9% |
| 3588272 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.61 | 52.0 | 4.82e-01 | 96.9% | 75.3% |
| 3959648 | 3601.1.1.0 ↗ | alpha complex topology › Class III adenylyl cyclases regulatory domain › Class III adenylyl cyclases regulatory domain › Class III adenylyl cyclases regulatory domain | 0.60 | 49.0 | 3.74e-01 | 93.8% | 37.5% |
| 3470146 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.59 | 42.0 | 2.96e-01 | 73.8% | 78.4% |
| 3974460 | 101.1.9.82 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 | 0.59 | 44.0 | 3.61e-01 | 81.5% | 47.7% |
| 3689148 | 604.6.1.0 ↗ | alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain | 0.59 | 50.0 | 3.42e-01 | 98.5% | 48.0% |
| 4068129 | 288.1.1.1 ↗ | a+b four layers › CNF1/YfiH-like putative cysteine hydrolases › CNF1/YfiH-like putative cysteine hydrolases › CNF1/YfiH-like putative cysteine hydrolases › Cu-oxidase_4 | 0.59 | 49.0 | 3.31e-01 | 95.4% | 39.2% |
| 3588263 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.59 | 46.0 | 4.41e-01 | 87.7% | 86.7% |
| 4955746 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.58 | 43.0 | 4.02e-01 | 83.1% | 67.1% |
| 3784546 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.58 | 47.0 | 4.28e-01 | 87.7% | 82.4% |
| 4441682 | 2003.1.2.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 | 0.58 | 42.0 | 2.69e-01 | 80.0% | 73.8% |
| 4976028 | 3352.1.1.0 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain | 0.57 | 49.0 | 3.05e-01 | 100.0% | 79.8% |
| 3677775 | 387.1.5.4 ↗ | few secondary structure elements › omega toxin-like › omega toxin-related › Scorpion toxin-like › Defensin_2 | 0.57 | 38.0 | 4.28e-01 | 70.8% | 93.9% |
| 3442371 | 304.7.1.0 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors | 0.57 | 39.0 | 3.66e-01 | 73.8% | 65.9% |
| 4420911 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.56 | 47.0 | 3.75e-01 | 96.9% | 45.2% |
| 3515878 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.56 | 44.0 | 4.27e-01 | 86.2% | 86.7% |
| 5078454 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 38.0 | 3.78e-01 | 83.1% | 67.1% |
| 3290892 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.56 | 49.0 | 4.19e-01 | 100.0% | 83.8% |
| 1827815 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.55 | 45.0 | 4.48e-01 | 96.9% | 88.2% |
| 3973554 | 306.3.1.0 ↗ | a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like | 0.55 | 39.0 | 3.59e-01 | 76.9% | 58.0% |
| 3924040 | 101.1.15.1 ↗ | alpha arrays › HTH › HTH › HAT1, C-terminal domain › MOZ_SAS | 0.54 | 42.0 | 4.06e-01 | 86.2% | 73.3% |
| 4407103 | 327.16.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system | 0.54 | 35.0 | 3.69e-01 | 72.3% | 73.3% |
| 5025961 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.52 | 36.0 | 3.60e-01 | 73.8% | 70.0% |
| 4566101 | 327.19.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › DNA mismatch repair protein MutL regulatory subdomain › DNA mismatch repair protein MutL regulatory subdomain › MutL_C | 0.52 | 34.0 | 3.04e-01 | 75.4% | 44.0% |
| 3962507 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.51 | 36.0 | 3.43e-01 | 83.1% | 58.8% |
| 4948401 | 4018.1.1.2 ↗ | a+b two layers › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › Inositol_P | 0.51 | 36.0 | 2.48e-01 | 75.4% | 40.0% |
| 4456185 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.50 | 36.0 | 3.45e-01 | 75.4% | 68.0% |
D2
high
residues 92-137
Domain cluster:
representative
CATH (31)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4u7bA01 | 1.10.10.1450 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.82 | 69.0 | 6.73e-01 | 95.7% | 86.3% |
| 1gdtB03 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.81 | 60.0 | 6.05e-01 | 100.0% | 82.2% |
| 7s03A01 | 1.10.10.1450 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.79 | 68.0 | 6.72e-01 | 100.0% | 94.0% |
| 4eqqA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 56.0 | 5.60e-01 | 87.0% | 87.5% |
| 4fcyA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.72 | 59.0 | 4.99e-01 | 93.5% | 53.8% |
| 1xriA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.72 | 62.0 | 4.30e-01 | 100.0% | 29.8% |
| 7t2rC01 | 1.10.10.1590 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › NADH-quinone oxidoreductase subunit E | 0.71 | 52.0 | 4.96e-01 | 82.6% | 70.2% |
| 4z4qA04 | 1.10.268.10 | Mainly Alpha › Orthogonal Bundle › Topoisomerase; domain 3 › Topoisomerase, domain 3 | 0.68 | 57.0 | 4.69e-01 | 100.0% | 50.6% |
| 1tbxB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 56.0 | 4.65e-01 | 100.0% | 67.8% |
| 2mh2A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 56.0 | 5.13e-01 | 100.0% | 93.8% |
| 1mw9X02 | 1.10.460.10 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 2 › Topoisomerase I, domain 2 | 0.67 | 55.0 | 3.89e-01 | 100.0% | 40.5% |
| 2k89A00 | 3.10.20.870 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › PFU (PLAA family ubiquitin binding), C-terminal domain | 0.66 | 52.0 | 4.53e-01 | 100.0% | 55.0% |
| 4mqvA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 53.0 | 4.85e-01 | 100.0% | 70.8% |
| 2p6vA00 | 1.20.120.1110 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › TAFH/NHR1 domain | 0.63 | 53.0 | 4.29e-01 | 100.0% | 71.1% |
| 4mtdD01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 52.0 | 4.36e-01 | 100.0% | 67.0% |
| 2is6A04 | 1.10.486.10 | Mainly Alpha › Orthogonal Bundle › PCRA; domain 4 › PCRA; domain 4 | 0.61 | 49.0 | 3.54e-01 | 100.0% | 94.4% |
| 2ld7B00 | 1.20.1160.11 | Mainly Alpha › Up-down Bundle › Paired amphipathic helix 2 (pah2 repeat) › Paired amphipathic helix | 0.61 | 44.0 | 3.85e-01 | 80.4% | 53.3% |
| 4hehA01 | 1.10.1240.10 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain | 0.60 | 49.0 | 4.22e-01 | 100.0% | 56.6% |
| 4r30A00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.60 | 48.0 | 3.38e-01 | 100.0% | 26.3% |
| 7qefA01 | 3.20.20.300 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycoside hydrolase, family 3, N-terminal domain | 0.59 | 42.0 | 2.49e-01 | 76.1% | 23.1% |
| 4toiA02 | 1.10.287.610 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.58 | 39.0 | 3.88e-01 | 100.0% | 68.8% |
| 1z8fA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.57 | 44.0 | 3.53e-01 | 100.0% | 73.6% |
| 6s2wA01 | 3.30.2260.10 | Alpha Beta › 2-Layer Sandwich › ERH-like fold › Enhancer of rudimentary | 0.56 | 46.0 | 3.97e-01 | 100.0% | 100.0% |
| 8fkmA01 | 3.30.1460.50 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.55 | 37.0 | 2.59e-01 | 73.9% | 20.1% |
| 2gscC00 | 1.20.1440.60 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 23S rRNA-intervening sequence | 0.54 | 44.0 | 3.50e-01 | 100.0% | 82.7% |
| 2nn4A00 | 1.10.287.760 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YqgQ-like | 0.54 | 45.0 | 4.17e-01 | 100.0% | 83.9% |
| 2rldA00 | 1.20.1440.60 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 23S rRNA-intervening sequence | 0.52 | 37.0 | 2.90e-01 | 91.3% | 32.5% |
| 2jgdB02 | 3.40.50.970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains | 0.52 | 40.0 | 2.49e-01 | 91.3% | 70.7% |
| 6jrpA01 | 1.10.30.10 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain | 0.51 | 38.0 | 3.57e-01 | 87.0% | 100.0% |
| 1vf7A03 | 1.10.287.470 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.50 | 39.0 | 3.66e-01 | 89.1% | 90.0% |
| 4l8jA04 | 1.10.287.470 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.50 | 35.0 | 3.40e-01 | 89.1% | 62.7% |
ECOD (44)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4983508 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.90 | 81.0 | 6.99e-01 | 100.0% | 67.1% |
| 4501343 | 101.35.1.0 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX | 0.89 | 75.0 | 7.11e-01 | 93.5% | 83.6% |
| 3781047 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.89 | 81.0 | 7.33e-01 | 100.0% | 76.7% |
| 3937317 | 101.1.1.75 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_48 | 0.86 | 74.0 | 7.26e-01 | 95.7% | 88.0% |
| 3313889 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.85 | 77.0 | 7.51e-01 | 100.0% | 92.0% |
| 5013347 | 101.1.2.946 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF26555 | 0.85 | 70.0 | 7.08e-01 | 91.3% | 95.6% |
| 3958041 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.84 | 73.0 | 6.51e-01 | 100.0% | 69.2% |
| 3184342 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.84 | 74.0 | 6.81e-01 | 100.0% | 76.7% |
| 5016992 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.84 | 70.0 | 7.12e-01 | 95.7% | 95.6% |
| 3931083 | 101.1.1.75 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_48 | 0.83 | 73.0 | 7.13e-01 | 100.0% | 92.0% |
| 3522325 | 101.1.1.75 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_48 | 0.83 | 73.0 | 6.50e-01 | 100.0% | 72.3% |
| 5042980 | 101.35.1.41 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › PF26555 | 0.82 | 65.0 | 6.42e-01 | 91.3% | 86.0% |
| 3928087 | 101.1.1.75 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_48 | 0.81 | 71.0 | 6.20e-01 | 100.0% | 67.1% |
| 4932774 | 101.40.1.1 ↗ | alpha arrays › HTH › 40S ribosomal protein S13 N-terminal domain › 40S ribosomal protein S13 N-terminal domain › Ribosomal_S13_N | 0.80 | 68.0 | 5.66e-01 | 95.7% | 58.7% |
| 3265679 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.80 | 67.0 | 6.62e-01 | 97.8% | 92.0% |
| 5029249 | 101.40.1.1 ↗ | alpha arrays › HTH › 40S ribosomal protein S13 N-terminal domain › 40S ribosomal protein S13 N-terminal domain › Ribosomal_S13_N | 0.79 | 67.0 | 5.60e-01 | 95.7% | 58.7% |
| 3233004 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.77 | 66.0 | 6.45e-01 | 95.7% | 88.0% |
| 4200176 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.77 | 66.0 | 3.84e-01 | 100.0% | 11.9% |
| 3910504 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.76 | 62.0 | 6.14e-01 | 97.8% | 88.0% |
| 3929147 | 101.1.1.103 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › DUF4817 | 0.76 | 64.0 | 6.14e-01 | 100.0% | 83.6% |
| 4953416 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.76 | 61.0 | 5.90e-01 | 97.8% | 85.5% |
| 3829115 | 101.1.1.270 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › A_thal_3526 | 0.74 | 61.0 | 5.56e-01 | 97.8% | 70.8% |
| 5002434 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.73 | 61.0 | 5.31e-01 | 100.0% | 81.3% |
| 3813940 | 101.35.1.6 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › A_thal_3526 | 0.72 | 59.0 | 5.44e-01 | 97.8% | 70.8% |
| 3924840 | 101.1.1.76 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Integrase_H2C2 | 0.72 | 59.0 | 5.66e-01 | 95.7% | 81.8% |
| 4983598 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.72 | 59.0 | 5.35e-01 | 95.7% | 80.0% |
| 3506989 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.72 | 63.0 | 6.16e-01 | 100.0% | 92.0% |
| 3315399 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.72 | 60.0 | 5.89e-01 | 100.0% | 96.0% |
| 5053497 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.71 | 57.0 | 5.35e-01 | 95.7% | 86.7% |
| 3293154 | 101.1.2.472 ↗ | alpha arrays › HTH › HTH › winged helix domain › A_thal_3526 | 0.71 | 60.0 | 5.57e-01 | 100.0% | 80.0% |
| 3601390 | 2007.2.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II | 0.70 | 60.0 | 4.07e-01 | 100.0% | 41.1% |
| 3310491 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.70 | 55.0 | 5.09e-01 | 89.1% | 71.7% |
| 3341091 | 101.35.1.6 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › A_thal_3526 | 0.70 | 58.0 | 5.34e-01 | 100.0% | 72.3% |
| 4956004 | 2004.1.1.1195 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Topoisom_bac | 0.70 | 58.0 | 3.43e-01 | 100.0% | 15.3% |
| 3297949 | 592.7.1.2 ↗ | alpha arrays › PWI domain-like › GIPC1 GH2 domain › GIPC1 GH2 domain › PWI | 0.70 | 57.0 | 5.19e-01 | 95.7% | 67.7% |
| 3808802 | 101.1.2.10 ↗ | alpha arrays › HTH › HTH › winged helix domain › Linker_histone | 0.69 | 57.0 | 5.04e-01 | 100.0% | 69.3% |
| 4263015 | 101.35.1.5 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH1 | 0.68 | 56.0 | 5.50e-01 | 95.7% | 90.0% |
| 3490008 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.68 | 57.0 | 5.17e-01 | 97.8% | 76.9% |
| 4142344 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.67 | 54.0 | 5.22e-01 | 95.7% | 90.9% |
| 3924597 | 330.16.1.0 ↗ | a+b two layers › dsRBD-like › ODA16 N-terminal domain › ODA16 N-terminal domain | 0.56 | 44.0 | 4.01e-01 | 95.7% | 90.0% |
| 3409145 | 101.1.1.24 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N | 0.56 | 41.0 | 4.14e-01 | 100.0% | 82.0% |
| 3331610 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.54 | 42.0 | 2.76e-01 | 97.8% | 18.1% |
| 5031714 | 601.7.1.2 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › HEPN | 0.53 | 39.0 | 3.13e-01 | 80.4% | 65.4% |
| 5084064 | 601.7.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain | 0.52 | 43.0 | 3.31e-01 | 100.0% | 39.2% |