Back to structures

MT560058.1__QPI17946.1__POP12_154__00154

Bact-Vir

MT560058.1__QPI17946.1__POP12_154__00154

Identity

Accession:
MT560058 ↗
Kingdom:
phage

Quality

77.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-73
PDB
Domain cluster: representative
CATH (37)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2nyxB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 67.0 5.31e-01 100.0% 62.7%
4hqeA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 64.0 5.64e-01 100.0% 80.0%
4gyiA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 64.0 5.84e-01 100.0% 90.3%
4esbA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 62.0 5.47e-01 100.0% 84.5%
7dvrA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 61.0 4.94e-01 100.0% 60.3%
1ub9A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 61.0 5.46e-01 100.0% 82.0%
5dymA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 61.0 5.56e-01 100.0% 90.6%
5e1wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 61.0 4.64e-01 100.0% 48.2%
2v1xA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 57.0 4.99e-01 94.4% 85.5%
2fbhA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 59.0 4.80e-01 100.0% 63.5%
5h20A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 60.0 5.31e-01 100.0% 83.5%
2zihC00 1.10.3630.10 Mainly Alpha › Orthogonal Bundle › yeast vps74-n-term truncation variant fold › yeast vps74-n-term truncation variant domain like 0.67 59.0 3.95e-01 100.0% 57.7%
2eshA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 59.0 5.07e-01 100.0% 79.8%
6abqB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 57.0 5.05e-01 100.0% 84.0%
3l7wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 55.0 4.91e-01 100.0% 81.9%
3l9fA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 55.0 5.11e-01 97.2% 97.8%
3elkA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 55.0 4.87e-01 100.0% 81.0%
1bm9A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 52.0 4.46e-01 94.4% 73.3%
1t6sB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 49.0 4.82e-01 87.3% 90.9%
4ejoA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 54.0 4.72e-01 100.0% 75.0%
2qbyB03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 52.0 4.87e-01 98.6% 98.9%
2hoeA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 42.0 4.59e-01 73.2% 100.0%
2mlgA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 44.0 4.34e-01 77.5% 85.7%
2dqlA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 51.0 4.38e-01 94.4% 73.9%
1yyvB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 52.0 4.52e-01 100.0% 73.2%
1sfxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 43.0 3.87e-01 85.9% 67.3%
1p4xA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 47.0 4.01e-01 100.0% 66.9%
3fo3A02 1.10.1130.10 Mainly Alpha › Orthogonal Bundle › Flavocytochrome C3; Chain A, domain 2 › Flavocytochrome C3; Chain A 0.55 43.0 2.82e-01 88.7% 51.3%
1b24A01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.55 46.0 4.30e-01 100.0% 100.0%
7xc2A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 46.0 4.09e-01 97.2% 84.0%
2qbyA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 45.0 4.25e-01 100.0% 100.0%
1dq3A04 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.54 42.0 3.77e-01 91.5% 71.1%
7jgsG02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 45.0 4.08e-01 94.4% 94.9%
2qmlA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.53 37.0 2.85e-01 76.1% 28.0%
4uhvA02 3.55.50.10 Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › Baseplate protein-like domains 0.52 36.0 3.39e-01 74.6% 80.4%
3r0aA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 40.0 3.51e-01 90.1% 70.0%
1kyzA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 40.0 3.65e-01 90.1% 77.7%
ECOD (92)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4026870 101.1.2.111 alpha arrays › HTH › HTH › winged helix domain › RQC 0.77 64.0 5.47e-01 90.1% 89.1%
4998735 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 66.0 5.30e-01 97.2% 75.6%
4991130 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 67.0 5.47e-01 100.0% 63.8%
5043135 101.1.2.26 alpha arrays › HTH › HTH › winged helix domain › HxlR 0.73 65.0 5.94e-01 100.0% 87.4%
4928190 101.1.2.26 alpha arrays › HTH › HTH › winged helix domain › HxlR 0.72 65.0 6.17e-01 100.0% 96.4%
5071263 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 63.0 5.84e-01 97.2% 98.9%
3785947 101.1.2.111 alpha arrays › HTH › HTH › winged helix domain › RQC 0.72 60.0 4.93e-01 90.1% 78.4%
3581762 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 62.0 5.40e-01 94.4% 81.9%
4998174 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.72 64.0 4.77e-01 100.0% 49.4%
3810002 101.1.2.111 alpha arrays › HTH › HTH › winged helix domain › RQC 0.71 59.0 5.07e-01 90.1% 78.2%
4979194 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 61.0 5.58e-01 95.8% 89.5%
4963008 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 59.0 5.46e-01 93.0% 84.4%
4971941 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.70 55.0 5.48e-01 85.9% 96.0%
4940950 101.1.2.143 alpha arrays › HTH › HTH › winged helix domain › HTH_34 0.70 57.0 5.54e-01 88.7% 100.0%
4926994 101.1.2.150 alpha arrays › HTH › HTH › winged helix domain › HTH_45 0.70 61.0 5.41e-01 98.6% 77.9%
5044327 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 59.0 5.25e-01 93.0% 87.0%
154263 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.70 62.0 5.47e-01 100.0% 84.5%
3240179 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 59.0 5.21e-01 94.4% 82.9%
4946524 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 62.0 5.36e-01 100.0% 78.2%
4978424 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.69 61.0 5.11e-01 97.2% 73.3%
3936891 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 57.0 5.19e-01 90.1% 86.3%
5051882 101.1.2.143 alpha arrays › HTH › HTH › winged helix domain › HTH_34 0.69 62.0 5.34e-01 100.0% 78.2%
5077595 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 56.0 4.79e-01 87.3% 70.9%
3644266 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 56.0 5.05e-01 90.1% 86.0%
3494759 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 56.0 4.76e-01 88.7% 82.6%
5031473 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.68 62.0 5.41e-01 100.0% 81.9%
4992821 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 58.0 4.68e-01 95.8% 64.3%
3550522 101.1.2.111 alpha arrays › HTH › HTH › winged helix domain › RQC 0.68 58.0 4.94e-01 94.4% 81.7%
4946426 3241.1.1.0 alpha arrays › Golgi phosphoprotein 3 › Golgi phosphoprotein 3 › Golgi phosphoprotein 3 0.68 60.0 4.27e-01 100.0% 65.6%
4999286 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.68 60.0 4.51e-01 100.0% 50.6%
4961487 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 59.0 5.04e-01 97.2% 68.7%
3944118 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 59.0 5.43e-01 95.8% 84.4%
4950221 101.1.2.143 alpha arrays › HTH › HTH › winged helix domain › HTH_34 0.68 59.0 5.22e-01 100.0% 81.5%
5001098 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 59.0 5.45e-01 97.2% 94.4%
5043001 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.68 58.0 5.14e-01 97.2% 75.2%
4928075 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 57.0 5.55e-01 94.4% 98.8%
5071269 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.68 59.0 4.28e-01 100.0% 44.3%
4953964 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.67 60.0 5.20e-01 98.6% 83.6%
4999532 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.67 61.0 4.21e-01 100.0% 38.7%
3602589 101.1.2.150 alpha arrays › HTH › HTH › winged helix domain › HTH_45 0.67 59.0 5.31e-01 100.0% 83.0%
3956796 101.1.2.49 alpha arrays › HTH › HTH › winged helix domain › PadR,Vir_act_alpha_C 0.67 58.0 4.34e-01 98.6% 66.5%
4981949 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.67 56.0 5.45e-01 93.0% 100.0%
4998663 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.67 56.0 4.62e-01 93.0% 67.7%
5079768 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.67 57.0 5.41e-01 95.8% 100.0%
5014176 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.67 59.0 4.55e-01 98.6% 54.4%
4978596 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.66 59.0 4.94e-01 100.0% 71.2%
4976218 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.66 59.0 4.98e-01 100.0% 75.8%
2709 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.66 59.0 5.07e-01 100.0% 79.8%
3587894 101.1.2.49 alpha arrays › HTH › HTH › winged helix domain › PadR,Vir_act_alpha_C 0.66 59.0 4.42e-01 98.6% 49.7%
4979997 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.66 58.0 4.70e-01 100.0% 65.7%
5035522 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.66 58.0 5.15e-01 100.0% 81.9%
5072114 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.66 57.0 4.50e-01 97.2% 57.3%
5053936 101.1.2.530 alpha arrays › HTH › HTH › winged helix domain › HVO_A0114 0.66 56.0 4.71e-01 97.2% 63.2%
5046461 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.66 58.0 4.23e-01 100.0% 45.5%
5031662 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.66 58.0 4.84e-01 100.0% 68.8%
3281879 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.65 58.0 4.35e-01 100.0% 51.1%
4940345 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.65 57.0 4.65e-01 98.6% 65.9%
2409292 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.65 57.0 5.03e-01 98.6% 84.6%
5041315 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.65 58.0 5.22e-01 100.0% 86.0%
4944051 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 57.0 4.37e-01 100.0% 52.9%
5001284 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.65 57.0 4.43e-01 100.0% 60.6%
3587554 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.65 57.0 5.14e-01 100.0% 86.0%
5064203 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 59.0 5.43e-01 100.0% 94.4%
4960288 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.65 56.0 4.25e-01 98.6% 67.4%
3868765 101.1.2.178 alpha arrays › HTH › HTH › winged helix domain › HTH_61 0.64 50.0 4.58e-01 84.5% 90.5%
5060792 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.64 56.0 4.74e-01 100.0% 75.0%
5065235 101.1.2.738 alpha arrays › HTH › HTH › winged helix domain › Vir_act_alpha_C 0.64 55.0 4.07e-01 95.8% 46.5%
3988732 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.64 57.0 4.96e-01 100.0% 80.6%
3964741 101.1.2.368 alpha arrays › HTH › HTH › winged helix domain › HTH_36 0.63 54.0 4.89e-01 100.0% 89.0%
4991742 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.62 55.0 4.49e-01 97.2% 67.7%
5077851 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.62 54.0 4.32e-01 100.0% 81.3%
4959456 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.62 55.0 4.21e-01 100.0% 82.4%
169108 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.62 55.0 4.87e-01 100.0% 81.0%
4996670 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.62 54.0 5.06e-01 100.0% 95.6%
149637 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.62 54.0 4.72e-01 100.0% 75.0%
5053457 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.62 54.0 4.00e-01 100.0% 46.2%
4947503 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.62 54.0 4.21e-01 100.0% 56.2%
4983039 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.61 51.0 4.65e-01 95.8% 96.0%
4984935 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.61 53.0 3.82e-01 98.6% 38.1%
4945186 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.61 44.0 3.66e-01 77.5% 51.5%
5054914 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.61 51.0 4.53e-01 98.6% 91.8%
3645708 101.1.2.386 alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.60 51.0 4.42e-01 97.2% 80.9%
4329890 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.60 46.0 3.68e-01 84.5% 48.7%
5039582 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.59 49.0 4.36e-01 94.4% 79.0%
5063201 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.58 45.0 3.65e-01 85.9% 69.4%
5008107 101.1.2.15 alpha arrays › HTH › HTH › winged helix domain › MarR 0.57 40.0 3.56e-01 73.2% 60.0%
5005164 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.57 47.0 4.26e-01 100.0% 91.7%
5044353 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.57 47.0 4.27e-01 95.8% 91.0%
5005295 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.56 47.0 3.96e-01 97.2% 79.2%
3355197 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.55 47.0 4.31e-01 100.0% 92.0%
1299892 101.1.2.88 alpha arrays › HTH › HTH › winged helix domain › Dimerisation 0.55 44.0 3.88e-01 93.0% 73.7%
5082051 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.53 44.0 4.15e-01 98.6% 98.9%