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MT560058.1__QPI17947.1__POP12_155__00155
Bact-VirMT560058.1__QPI17947.1__POP12_155__00155
Identity
- Accession:
- MT560058 ↗
- Kingdom:
- phage
Quality
83.6
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Straboviridae›
Pectobacterium_phage_POP12
TaxID: 2741065
Cluster
View cluster (7 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-120
Domain cluster:
rep: OR088902.1__WJZ27987.1__NCTGTJJY_CDS0108__00108__D59-97_113-182
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF23772.2 best | Phage_g100 | 67.9 | 2.10e-18 | 79.3% | 97.1% |
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ib8A02 | 2.30.30.180 | Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain | 0.76 | 42.0 | 5.51e-01 | 70.7% | 95.5% |
| 5ygbA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.70 | 39.0 | 4.62e-01 | 71.6% | 78.8% |
| 1cv8A00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.62 | 43.0 | 3.76e-01 | 71.6% | 49.7% |
| 2gtlN02 | 2.40.128.620 | Mainly Beta › Beta Barrel › Lipocalin › | 0.60 | 41.0 | 3.66e-01 | 70.7% | 74.7% |
| 7oc3A01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 35.0 | 3.89e-01 | 71.6% | 72.8% |
| 3apuB00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.58 | 51.0 | 4.49e-01 | 95.7% | 80.2% |
| 2xklA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.58 | 52.0 | 4.80e-01 | 98.3% | 83.9% |
| 3qkgA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.57 | 49.0 | 4.40e-01 | 95.7% | 86.6% |
| 3q5zA02 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.57 | 44.0 | 4.36e-01 | 87.9% | 77.7% |
| 1vyfA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.55 | 38.0 | 3.62e-01 | 70.7% | 98.5% |
| 1lkeA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.50 | 45.0 | 4.07e-01 | 99.1% | 87.3% |
| 1aqbA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.50 | 42.0 | 3.72e-01 | 92.2% | 85.1% |
| 5fgoA00 | 3.10.450.700 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.50 | 28.0 | 3.54e-01 | 79.3% | 100.0% |
| 1epaA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.50 | 43.0 | 3.90e-01 | 95.7% | 85.6% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3845351 | 4.1.1.31 ↗ | beta barrels › SH3 › SH3 › SH3 › Spin-Ssty | 0.80 | 46.0 | 5.26e-01 | 70.7% | 74.4% |
| 3230520 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.76 | 39.0 | 4.45e-01 | 72.4% | 65.6% |
| 4027263 | 4.1.1.104 ↗ | beta barrels › SH3 › SH3 › SH3 › KN17_SH3 | 0.73 | 40.0 | 3.96e-01 | 71.6% | 50.8% |
| 3500542 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.72 | 39.0 | 4.35e-01 | 72.4% | 67.8% |
| 3214474 | 4.1.1.390 ↗ | beta barrels › SH3 › SH3 › SH3 › PF29855 | 0.72 | 41.0 | 4.45e-01 | 72.4% | 66.0% |
| 7380 | 219.1.1.34 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C47 | 0.62 | 43.0 | 3.76e-01 | 71.6% | 49.7% |
| 3725498 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 37.0 | 4.61e-01 | 70.7% | 100.0% |
| 3342793 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.59 | 48.0 | 4.05e-01 | 87.1% | 78.9% |
| 4023201 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.58 | 50.0 | 3.60e-01 | 90.5% | 57.9% |
| 3530891 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.58 | 37.0 | 3.81e-01 | 71.6% | 67.9% |
| 3631731 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 39.0 | 3.59e-01 | 72.4% | 70.0% |
| 3208838 | 4.1.1.20 ↗ | beta barrels › SH3 › SH3 › SH3 › BAH | 0.55 | 39.0 | 3.55e-01 | 72.4% | 67.7% |
| 5021454 | 4252.1.1.0 ↗ | beta barrels › AttH-like › AttH-like › AttH-like | 0.54 | 39.0 | 3.33e-01 | 75.0% | 94.2% |
| 5073672 | 4252.1.1.7 ↗ | beta barrels › AttH-like › AttH-like › AttH-like › Tocopherol_cycl | 0.53 | 37.0 | 3.24e-01 | 72.4% | 95.7% |
| 3665882 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.52 | 43.0 | 4.09e-01 | 87.1% | 92.6% |
| 4928923 | 4200.1.1.0 ↗ | beta barrels › YmcC-like › YmcC-like › YmcC-like | 0.52 | 46.0 | 3.94e-01 | 98.3% | 91.6% |
| 3589823 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.52 | 30.0 | 3.72e-01 | 76.7% | 100.0% |