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MT560058.1__QPI17971.1__POP12_179__00179
Bact-VirMT560058.1__QPI17971.1__POP12_179__00179
Identity
- Accession:
- MT560058 ↗
- Kingdom:
- phage
Quality
73.4
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Straboviridae›
Pectobacterium_phage_POP12
TaxID: 2741065
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-115
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2fggA01 | 3.30.160.240 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Rv1738 | 0.58 | 34.0 | 4.14e-01 | 74.8% | 89.3% |
| 1l3aA00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.56 | 40.0 | 3.56e-01 | 73.9% | 56.0% |
| 6eotD01 | 2.140.10.30 | Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Dipeptidylpeptidase IV, N-terminal domain | 0.56 | 39.0 | 2.52e-01 | 71.3% | 25.4% |
| 1y96D00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 36.0 | 4.18e-01 | 72.2% | 96.4% |
| 1u7bA00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.51 | 37.0 | 2.88e-01 | 74.8% | 61.4% |
| 3p91A00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.50 | 36.0 | 2.83e-01 | 74.8% | 62.0% |
| 1evjC02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.50 | 34.0 | 3.01e-01 | 70.4% | 66.3% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5051613 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.64 | 26.0 | 2.65e-01 | 73.9% | 37.3% |
| 4184401 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.56 | 44.0 | 3.93e-01 | 82.6% | 88.7% |
| 3679206 | 2484.1.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 | 0.56 | 40.0 | 2.66e-01 | 73.0% | 45.6% |
| 4943395 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.55 | 40.0 | 3.53e-01 | 75.7% | 65.9% |
| 3709800 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.54 | 30.0 | 3.30e-01 | 78.3% | 65.3% |
| 4008035 | 223.1.1.112 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PF30417 | 0.52 | 38.0 | 2.89e-01 | 76.5% | 69.8% |
| 3608772 | 2004.1.1.427 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › RHSP, RHS_N | 0.52 | 40.0 | 2.74e-01 | 82.6% | 54.8% |
| 3977017 | 223.1.1.57 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › CSS-motif | 0.51 | 43.0 | 3.40e-01 | 89.6% | 52.0% |
| 3980114 | 3860.1.1.158 ↗ | alpha bundles › Myosin VI lever arm › Myosin VI lever arm › Myosin VI lever arm › ThrE | 0.51 | 41.0 | 3.73e-01 | 84.3% | 86.7% |
| 3821886 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.51 | 27.0 | 3.34e-01 | 80.0% | 81.3% |