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MT584811.1__QLB38253.1__phiGT1_41__00041
Bact-VirMT584811.1__QLB38253.1__phiGT1_41__00041
Identity
- Accession:
- MT584811 ↗
- Kingdom:
- phage
Quality
83.5
mean pLDDT
Cluster
View cluster (5 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 12-118
Domain cluster:
rep: MT006234.1__QIG78055.1__BRUR0010001c01_00024__00024__D3-152
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04404.18 best | ERF | 44.6 | 2.20e-11 | 99.1% | 72.5% |
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ah5A03 | 3.30.160.40 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Porphobilinogen deaminase, C-terminal domain | 0.67 | 40.0 | 4.36e-01 | 72.9% | 73.3% |
| 2qkdA01 | 2.20.25.420 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ZPR1, zinc finger domain | 0.63 | 28.0 | 3.98e-01 | 73.8% | 91.7% |
| 6f1uK02 | 3.90.1150.210 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit | 0.62 | 43.0 | 3.95e-01 | 72.9% | 76.6% |
| 2rs7A01 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.61 | 39.0 | 4.54e-01 | 71.0% | 93.2% |
| 3ecrB03 | 3.30.160.40 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Porphobilinogen deaminase, C-terminal domain | 0.60 | 42.0 | 4.31e-01 | 72.0% | 76.5% |
| 4id2A00 | 2.40.128.510 | Mainly Beta › Beta Barrel › Lipocalin › Protein of unknown function DUF4738 | 0.56 | 34.0 | 3.19e-01 | 70.1% | 46.3% |
| 2xzhA00 | 2.130.10.110 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Clathrin heavy-chain terminal domain | 0.55 | 41.0 | 2.90e-01 | 79.4% | 97.8% |
| 1u14A00 | 3.90.950.10 | Alpha Beta › Alpha-Beta Complex › Maf protein › | 0.54 | 46.0 | 3.95e-01 | 93.5% | 95.3% |
| 4r80A00 | 3.10.450.630 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 30.0 | 3.46e-01 | 72.0% | 76.3% |
| 2lt1A00 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.51 | 35.0 | 3.99e-01 | 95.3% | 100.0% |
| 1u17A00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.51 | 41.0 | 3.44e-01 | 86.9% | 71.4% |
ECOD (52)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5039841 | 330.1.1.36 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › ERF | 0.89 | 83.0 | 8.25e-01 | 100.0% | 95.5% |
| 2771818 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.81 | 38.0 | 3.21e-01 | 98.1% | 28.8% |
| 3809302 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.77 | 45.0 | 5.05e-01 | 86.9% | 74.1% |
| 3519032 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.74 | 47.0 | 4.84e-01 | 87.9% | 68.0% |
| 3651210 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.73 | 32.0 | 4.20e-01 | 89.7% | 73.3% |
| 4226251 | 375.1.1.252 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › PF27302 | 0.72 | 33.0 | 4.33e-01 | 77.6% | 78.3% |
| 3499841 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.71 | 45.0 | 4.90e-01 | 73.8% | 76.7% |
| 3819309 | 330.1.1.5 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › DND1_DSRM | 0.68 | 47.0 | 5.16e-01 | 86.0% | 88.2% |
| 4058654 | 330.4.1.1 ↗ | a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC | 0.68 | 42.0 | 4.37e-01 | 72.0% | 66.7% |
| 4026006 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.68 | 44.0 | 5.00e-01 | 83.2% | 88.7% |
| 4975692 | 330.4.1.1 ↗ | a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC | 0.67 | 40.0 | 4.33e-01 | 72.9% | 70.0% |
| 4262169 | 330.4.1.1 ↗ | a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC | 0.67 | 43.0 | 4.54e-01 | 72.0% | 74.2% |
| 4090939 | 330.4.1.1 ↗ | a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC | 0.66 | 38.0 | 4.36e-01 | 72.0% | 76.2% |
| 3937984 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.66 | 48.0 | 4.95e-01 | 92.5% | 80.0% |
| 4954830 | 2484.1.1.43 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Endonuclease_5 | 0.66 | 44.0 | 3.62e-01 | 71.0% | 37.9% |
| 4438684 | 330.4.1.1 ↗ | a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC | 0.66 | 38.0 | 4.28e-01 | 72.0% | 72.6% |
| 4416182 | 241.15.1.3 ↗ | a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain › SPC25 | 0.65 | 46.0 | 4.64e-01 | 72.0% | 75.2% |
| 4048220 | 330.4.1.1 ↗ | a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC | 0.65 | 39.0 | 4.38e-01 | 72.0% | 78.8% |
| 4460237 | 330.4.1.1 ↗ | a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC | 0.65 | 39.0 | 4.50e-01 | 72.0% | 84.0% |
| 4524129 | 330.4.1.1 ↗ | a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC | 0.65 | 45.0 | 4.75e-01 | 72.0% | 80.0% |
| 3928293 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.64 | 45.0 | 4.47e-01 | 93.5% | 68.7% |
| 4609498 | 330.4.1.1 ↗ | a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC | 0.64 | 38.0 | 4.31e-01 | 72.0% | 78.8% |
| 3603056 | 330.4.1.1 ↗ | a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC | 0.63 | 40.0 | 4.63e-01 | 72.0% | 90.7% |
| 3602244 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.62 | 49.0 | 4.45e-01 | 85.0% | 66.7% |
| 3585861 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.61 | 42.0 | 3.82e-01 | 87.9% | 52.9% |
| 4961150 | 330.4.1.1 ↗ | a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC | 0.61 | 37.0 | 3.93e-01 | 72.0% | 67.7% |
| 4960250 | 330.2.1.5 ↗ | a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) › PF29181 | 0.61 | 41.0 | 4.24e-01 | 72.9% | 73.0% |
| 5058021 | 330.2.1.0 ↗ | a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) | 0.61 | 41.0 | 4.19e-01 | 72.0% | 70.5% |
| 4973433 | 330.4.1.1 ↗ | a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC | 0.61 | 37.0 | 3.95e-01 | 72.0% | 70.0% |
| 3852952 | 330.1.1.5 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › DND1_DSRM | 0.60 | 42.0 | 4.64e-01 | 72.0% | 96.2% |
| 5049449 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.60 | 28.0 | 3.63e-01 | 73.8% | 86.0% |
| 5056544 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.60 | 31.0 | 4.11e-01 | 75.7% | 96.4% |
| 3435911 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.60 | 46.0 | 4.60e-01 | 81.3% | 93.6% |
| 4965501 | 330.4.1.1 ↗ | a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC | 0.59 | 36.0 | 3.85e-01 | 72.0% | 70.0% |
| 5073192 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.58 | 30.0 | 3.56e-01 | 88.8% | 75.4% |
| 4027851 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.58 | 41.0 | 3.67e-01 | 71.0% | 87.6% |
| 3721174 | 719.1.1.0 ↗ | beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain | 0.58 | 39.0 | 3.66e-01 | 70.1% | 98.6% |
| 5025341 | 330.2.1.0 ↗ | a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) | 0.58 | 37.0 | 3.88e-01 | 72.9% | 70.0% |
| 4935472 | 330.4.1.0 ↗ | a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain | 0.57 | 35.0 | 4.10e-01 | 72.9% | 92.9% |
| 5011583 | 2484.1.1.43 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Endonuclease_5 | 0.55 | 41.0 | 3.43e-01 | 80.4% | 44.2% |
| 4937869 | 3414.1.1.0 ↗ | beta sandwiches › A putative surface protein › A putative surface protein › A putative surface protein | 0.55 | 33.0 | 3.61e-01 | 78.5% | 72.9% |
| 3062762 | 7503.1.1.2 ↗ | a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › ABC_trans_aux | 0.55 | 48.0 | 4.24e-01 | 94.4% | 88.3% |
| 151649 | 5.1.4.11 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Clathrin_propel | 0.54 | 41.0 | 2.94e-01 | 80.4% | 88.4% |
| 4289288 | 330.6.1.1 ↗ | a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer | 0.54 | 40.0 | 3.79e-01 | 87.9% | 64.8% |
| 5041343 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.54 | 32.0 | 3.79e-01 | 71.0% | 85.3% |
| 4297447 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.53 | 41.0 | 3.73e-01 | 80.4% | 64.3% |
| 5000965 | 512.1.1.0 ↗ | a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) | 0.52 | 34.0 | 3.73e-01 | 81.3% | 80.0% |
| 3510980 | 7525.1.1.2 ↗ | a/b three-layered sandwiches › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like › His_Phos_2 | 0.52 | 42.0 | 3.06e-01 | 87.9% | 42.7% |
| 3606814 | 896.1.1.0 ↗ | a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related | 0.51 | 33.0 | 3.67e-01 | 95.3% | 87.2% |
| 4446280 | 2484.1.1.48 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MutS_II | 0.51 | 29.0 | 2.61e-01 | 90.7% | 36.3% |
| 3289254 | 220.1.1.82 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_6 | 0.50 | 36.0 | 3.79e-01 | 92.5% | 83.2% |
| 4100001 | 9.1.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin | 0.50 | 38.0 | 3.26e-01 | 82.2% | 67.8% |
D2
high
residues 146-194
Domain cluster:
representative
CATH (36)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2jpnA00 | 1.20.1280.210 | Mainly Alpha › Up-down Bundle › Monooxygenase › Uncharacterised protein UvsW.1 | 0.81 | 71.0 | 6.06e-01 | 100.0% | 73.4% |
| 3l0mA02 | 1.20.1280.280 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.80 | 70.0 | 6.03e-01 | 100.0% | 88.5% |
| 3t5vA00 | 1.25.40.990 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.79 | 68.0 | 4.16e-01 | 100.0% | 16.4% |
| 4iggB02 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.78 | 68.0 | 5.12e-01 | 100.0% | 63.6% |
| 1rz4A01 | 1.25.40.250 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › ARM repeat; domain 1 | 0.76 | 65.0 | 4.95e-01 | 98.0% | 43.3% |
| 1mhyG02 | 1.20.1280.30 | Mainly Alpha › Up-down Bundle › Monooxygenase › Methane monooxygenase, gamma chain, domain 2 | 0.76 | 67.0 | 5.88e-01 | 100.0% | 78.1% |
| 4evfA02 | 1.10.220.10 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin | 0.69 | 57.0 | 5.10e-01 | 98.0% | 79.7% |
| 4rg6A02 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.68 | 59.0 | 5.11e-01 | 100.0% | 67.5% |
| 3d7iB00 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.67 | 58.0 | 4.69e-01 | 100.0% | 59.2% |
| 1su0B00 | 3.90.1010.10 | Alpha Beta › Alpha-Beta Complex › Sufe protein. Chain: A › | 0.65 | 53.0 | 4.04e-01 | 100.0% | 55.9% |
| 4dyqA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.65 | 54.0 | 4.38e-01 | 98.0% | 54.4% |
| 3ne5B04 | 6.10.140.730 | Special › Helix non-globular › Helix Hairpins › | 0.65 | 50.0 | 4.97e-01 | 89.8% | 94.1% |
| 1fioA00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.64 | 54.0 | 3.72e-01 | 100.0% | 49.5% |
| 3r2qA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.63 | 50.0 | 3.96e-01 | 93.9% | 68.1% |
| 1ngkB00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.63 | 52.0 | 4.01e-01 | 100.0% | 94.5% |
| 4gltA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.61 | 48.0 | 3.86e-01 | 93.9% | 68.4% |
| 4ksaA02 | 1.20.140.90 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Malonyl-CoA decarboxylase, oligemerization domain | 0.61 | 48.0 | 3.61e-01 | 91.8% | 67.2% |
| 7nc3F01 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.61 | 47.0 | 3.64e-01 | 85.7% | 49.1% |
| 3h20A04 | 1.10.1240.50 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › | 0.60 | 50.0 | 4.25e-01 | 100.0% | 65.2% |
| 1zvwA01 | 1.20.970.10 | Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C | 0.60 | 50.0 | 4.65e-01 | 98.0% | 92.4% |
| 4gtnA01 | 1.20.970.10 | Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C | 0.60 | 51.0 | 4.50e-01 | 98.0% | 82.4% |
| 1vw4L01 | 3.90.1030.10 | Alpha Beta › Alpha-Beta Complex › 50s Ribosomal Protein L17; Chain: A, › Ribosomal protein L17 | 0.60 | 52.0 | 3.80e-01 | 100.0% | 85.2% |
| 3mzoB00 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.60 | 48.0 | 3.30e-01 | 98.0% | 28.6% |
| 2vixA03 | 1.20.1280.240 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.58 | 45.0 | 3.73e-01 | 100.0% | 57.5% |
| 1vquA01 | 1.20.970.10 | Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C | 0.58 | 49.0 | 4.49e-01 | 100.0% | 80.6% |
| 4muoA01 | 1.20.970.10 | Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C | 0.57 | 49.0 | 4.34e-01 | 98.0% | 90.3% |
| 4adnA01 | 1.20.1280.250 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.57 | 45.0 | 3.98e-01 | 100.0% | 71.8% |
| 4ptsB02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.57 | 45.0 | 3.24e-01 | 95.9% | 68.4% |
| 2yjgA01 | 3.90.226.30 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › LarA, C-terminal domain | 0.56 | 42.0 | 3.00e-01 | 91.8% | 23.8% |
| 3w15B00 | 6.10.280.230 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.56 | 37.0 | 3.32e-01 | 75.5% | 47.2% |
| 2lpnA00 | 1.10.225.10 | Mainly Alpha › Orthogonal Bundle › NK-Lysin › Saposin-like | 0.55 | 43.0 | 3.59e-01 | 98.0% | 61.0% |
| 3ez0C00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.55 | 41.0 | 2.86e-01 | 89.8% | 62.0% |
| 1lm3B00 | 1.20.120.10 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c/b562 | 0.54 | 43.0 | 3.54e-01 | 98.0% | 84.0% |
| 5dajD00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.53 | 44.0 | 3.05e-01 | 98.0% | 49.0% |
| 2cc3A00 | 3.10.450.230 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › VirB8 protein | 0.53 | 42.0 | 3.20e-01 | 100.0% | 36.8% |
| 3anwA01 | 1.20.58.1030 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.52 | 44.0 | 3.46e-01 | 100.0% | 68.1% |
ECOD (44)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3591850 | 4030.1.1.0 ↗ | alpha bundles › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz | 0.89 | 82.0 | 7.38e-01 | 100.0% | 80.0% |
| 3359281 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.88 | 77.0 | 5.47e-01 | 98.0% | 34.3% |
| 3303438 | 109.4.1.1292 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_3 | 0.88 | 77.0 | 4.60e-01 | 98.0% | 15.0% |
| 3279367 | 192.7.1.3 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Phe_tRNA-synt_N | 0.87 | 80.0 | 5.99e-01 | 100.0% | 68.2% |
| 3271898 | 109.4.1.43 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SAC3_GANP | 0.85 | 75.0 | 4.42e-01 | 100.0% | 13.5% |
| 3322514 | 109.4.1.43 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SAC3_GANP | 0.85 | 76.0 | 4.59e-01 | 100.0% | 19.3% |
| 3739275 | 109.4.1.43 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SAC3_GANP | 0.85 | 75.0 | 4.49e-01 | 100.0% | 15.1% |
| 3379773 | 109.4.1.43 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SAC3_GANP | 0.84 | 75.0 | 4.48e-01 | 100.0% | 17.5% |
| 4002244 | 101.1.2.45 ↗ | alpha arrays › HTH › HTH › winged helix domain › SAC3_GANP | 0.84 | 72.0 | 4.63e-01 | 95.9% | 21.9% |
| 184670 | 6068.1.1.1 ↗ | alpha arrays › T4 Bacteriophage Helicase Uvsw.1 › T4 Bacteriophage Helicase Uvsw.1 › T4 Bacteriophage Helicase Uvsw.1 › UvsW-1 | 0.81 | 71.0 | 6.06e-01 | 100.0% | 73.4% |
| 3997700 | 109.4.1.1300 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8, TPR_16, TPR_19 | 0.80 | 70.0 | 4.11e-01 | 100.0% | 13.7% |
| 3905926 | 109.4.1.43 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SAC3_GANP | 0.79 | 68.0 | 4.32e-01 | 100.0% | 20.0% |
| 3298593 | 109.4.1.43 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SAC3_GANP | 0.79 | 68.0 | 4.27e-01 | 100.0% | 19.6% |
| None | — | 0.76 | 65.0 | 4.32e-01 | 100.0% | 25.7% | |
| 3432388 | 109.4.1.43 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SAC3_GANP | 0.74 | 59.0 | 4.24e-01 | 91.8% | 33.3% |
| 3741876 | 109.4.1.43 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SAC3_GANP | 0.73 | 62.0 | 3.94e-01 | 100.0% | 20.0% |
| 3750022 | 604.1.1.1 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin | 0.69 | 58.0 | 4.58e-01 | 100.0% | 84.5% |
| 3590178 | 2484.1.1.199 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Transposase_mut | 0.69 | 59.0 | 3.67e-01 | 100.0% | 19.7% |
| 4958656 | 2484.1.1.199 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Transposase_mut | 0.69 | 59.0 | 3.68e-01 | 100.0% | 18.3% |
| 5044421 | 592.2.1.0 ↗ | alpha arrays › PWI domain-like › YugE-like › YugE-like | 0.66 | 57.0 | 4.84e-01 | 98.0% | 66.3% |
| 3451306 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.65 | 56.0 | 3.27e-01 | 100.0% | 16.9% |
| 3439369 | 11.1.1.837 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TAF2_3rd | 0.64 | 51.0 | 3.39e-01 | 93.9% | 30.4% |
| 3273910 | 622.4.1.0 ↗ | alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related | 0.64 | 43.0 | 3.37e-01 | 71.4% | 60.0% |
| 4945246 | 184.1.1.6 ↗ | alpha arrays › Nucleoside phosphorylase/phosphoribosyltransferase-N › Nucleoside phosphorylase/phosphoribosyltransferase-N › Nucleoside phosphorylase/phosphoribosyltransferase-N › Glycos_transf_3 | 0.64 | 54.0 | 4.87e-01 | 98.0% | 77.1% |
| 4269819 | 184.1.1.1 ↗ | alpha arrays › Nucleoside phosphorylase/phosphoribosyltransferase-N › Nucleoside phosphorylase/phosphoribosyltransferase-N › Nucleoside phosphorylase/phosphoribosyltransferase-N › Glycos_trans_3N | 0.63 | 54.0 | 4.96e-01 | 98.0% | 89.2% |
| 5050932 | 7531.1.1.1 ↗ | a/b three-layered sandwiches › Carbamate kinase-like › Carbamate kinase-like › Carbamate kinase-like › AA_kinase | 0.62 | 41.0 | 2.55e-01 | 71.4% | 10.8% |
| 4964894 | 2004.1.3.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III › POR | 0.62 | 46.0 | 3.13e-01 | 100.0% | 19.5% |
| 4385598 | 184.1.1.1 ↗ | alpha arrays › Nucleoside phosphorylase/phosphoribosyltransferase-N › Nucleoside phosphorylase/phosphoribosyltransferase-N › Nucleoside phosphorylase/phosphoribosyltransferase-N › Glycos_trans_3N | 0.62 | 53.0 | 4.86e-01 | 98.0% | 84.6% |
| 4394553 | 184.1.1.1 ↗ | alpha arrays › Nucleoside phosphorylase/phosphoribosyltransferase-N › Nucleoside phosphorylase/phosphoribosyltransferase-N › Nucleoside phosphorylase/phosphoribosyltransferase-N › Glycos_trans_3N | 0.62 | 51.0 | 4.55e-01 | 95.9% | 70.7% |
| 4413999 | 184.1.1.1 ↗ | alpha arrays › Nucleoside phosphorylase/phosphoribosyltransferase-N › Nucleoside phosphorylase/phosphoribosyltransferase-N › Nucleoside phosphorylase/phosphoribosyltransferase-N › Glycos_trans_3N | 0.62 | 52.0 | 4.71e-01 | 98.0% | 82.9% |
| 4048253 | 184.1.1.1 ↗ | alpha arrays › Nucleoside phosphorylase/phosphoribosyltransferase-N › Nucleoside phosphorylase/phosphoribosyltransferase-N › Nucleoside phosphorylase/phosphoribosyltransferase-N › Glycos_trans_3N | 0.62 | 52.0 | 4.51e-01 | 98.0% | 72.5% |
| 4459550 | 184.1.1.1 ↗ | alpha arrays › Nucleoside phosphorylase/phosphoribosyltransferase-N › Nucleoside phosphorylase/phosphoribosyltransferase-N › Nucleoside phosphorylase/phosphoribosyltransferase-N › Glycos_trans_3N | 0.62 | 52.0 | 4.70e-01 | 98.0% | 82.9% |
| 3241 | 184.1.1.1 ↗ | alpha arrays › Nucleoside phosphorylase/phosphoribosyltransferase-N › Nucleoside phosphorylase/phosphoribosyltransferase-N › Nucleoside phosphorylase/phosphoribosyltransferase-N › Glycos_trans_3N | 0.61 | 51.0 | 4.63e-01 | 98.0% | 82.9% |
| 4876325 | 109.4.1.1413 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF28415 | 0.61 | 48.0 | 4.20e-01 | 98.0% | 65.9% |
| 4079380 | 184.1.1.1 ↗ | alpha arrays › Nucleoside phosphorylase/phosphoribosyltransferase-N › Nucleoside phosphorylase/phosphoribosyltransferase-N › Nucleoside phosphorylase/phosphoribosyltransferase-N › Glycos_trans_3N | 0.61 | 52.0 | 4.76e-01 | 98.0% | 93.8% |
| 4681371 | 184.1.1.1 ↗ | alpha arrays › Nucleoside phosphorylase/phosphoribosyltransferase-N › Nucleoside phosphorylase/phosphoribosyltransferase-N › Nucleoside phosphorylase/phosphoribosyltransferase-N › Glycos_trans_3N | 0.61 | 49.0 | 4.52e-01 | 100.0% | 71.4% |
| 4232831 | 184.1.1.1 ↗ | alpha arrays › Nucleoside phosphorylase/phosphoribosyltransferase-N › Nucleoside phosphorylase/phosphoribosyltransferase-N › Nucleoside phosphorylase/phosphoribosyltransferase-N › Glycos_trans_3N | 0.61 | 51.0 | 4.74e-01 | 98.0% | 81.5% |
| 185297 | 6035.1.1.2 ↗ | alpha bundles › Primase helical domain › Primase helical domain › Primase helical domain › RepB_primase_C | 0.60 | 50.0 | 4.25e-01 | 100.0% | 65.2% |
| 4058002 | 184.1.1.1 ↗ | alpha arrays › Nucleoside phosphorylase/phosphoribosyltransferase-N › Nucleoside phosphorylase/phosphoribosyltransferase-N › Nucleoside phosphorylase/phosphoribosyltransferase-N › Glycos_trans_3N | 0.60 | 50.0 | 4.67e-01 | 98.0% | 89.2% |
| 4282164 | 3455.1.1.4 ↗ | alpha arrays › WY-domain in RXLR effectors › WY-domain in RXLR effectors › WY-domain in RXLR effectors › ATR1_WY-dom | 0.60 | 46.0 | 3.85e-01 | 85.7% | 74.4% |
| 4387655 | 184.1.1.1 ↗ | alpha arrays › Nucleoside phosphorylase/phosphoribosyltransferase-N › Nucleoside phosphorylase/phosphoribosyltransferase-N › Nucleoside phosphorylase/phosphoribosyltransferase-N › Glycos_trans_3N | 0.60 | 51.0 | 4.61e-01 | 100.0% | 82.9% |
| 3899734 | 604.1.1.1 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin | 0.60 | 48.0 | 4.00e-01 | 98.0% | 90.0% |
| 3960278 | 3447.1.1.0 ↗ | alpha bundles › Isoprenylcysteine carboxyl methyltransferase (ICMT) › Isoprenylcysteine carboxyl methyltransferase (ICMT) › Isoprenylcysteine carboxyl methyltransferase (ICMT) | 0.58 | 51.0 | 3.26e-01 | 98.0% | 77.0% |
| 4664858 | 184.1.1.1 ↗ | alpha arrays › Nucleoside phosphorylase/phosphoribosyltransferase-N › Nucleoside phosphorylase/phosphoribosyltransferase-N › Nucleoside phosphorylase/phosphoribosyltransferase-N › Glycos_trans_3N | 0.58 | 48.0 | 4.29e-01 | 98.0% | 77.3% |