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MT584811.1__QLB38258.1__phiGT1_46__00046
Bact-VirMT584811.1__QLB38258.1__phiGT1_46__00046
Identity
- Accession:
- MT584811 ↗
- Kingdom:
- phage
Quality
90.7
mean pLDDT
Cluster
View cluster (7 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-99
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2gv9A05 | 1.10.287.690 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain | 0.82 | 43.0 | 5.38e-01 | 85.6% | 84.7% |
| 1ekgA00 | 3.30.920.10 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY | 0.68 | 32.0 | 3.05e-01 | 78.4% | 36.1% |
| 3l0iA01 | 1.20.120.1520 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.59 | 45.0 | 3.85e-01 | 84.5% | 92.0% |
| 6vq6H01 | 1.10.287.3240 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.58 | 41.0 | 3.25e-01 | 75.3% | 69.6% |
| 6p4xA03 | 3.40.367.20 | Alpha Beta › 3-Layer(aba) Sandwich › Hexokinase; domain 1 › | 0.57 | 47.0 | 3.41e-01 | 90.7% | 64.0% |
| 1wp1B01 | 1.20.1600.10 | Mainly Alpha › Up-down Bundle › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) | 0.56 | 50.0 | 3.36e-01 | 100.0% | 93.0% |
| 2a2cA03 | 1.20.1440.340 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.55 | 49.0 | 4.37e-01 | 99.0% | 100.0% |
| 3tdvA02 | 3.90.1200.10 | Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe | 0.54 | 48.0 | 3.79e-01 | 100.0% | 64.1% |
| 2oarB00 | 1.10.1200.120 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Large-conductance mechanosensitive channel, MscL; domain 1 | 0.52 | 36.0 | 3.33e-01 | 71.1% | 58.4% |
| 3sfvB01 | 3.30.450.390 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.51 | 37.0 | 3.29e-01 | 77.3% | 97.9% |
ECOD (29)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3479756 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.66 | 48.0 | 4.66e-01 | 75.3% | 98.1% |
| 4102849 | 507.1.1.0 ↗ | alpha arrays › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related | 0.66 | 52.0 | 4.77e-01 | 84.5% | 99.2% |
| 4376809 | 507.1.1.0 ↗ | alpha arrays › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related | 0.63 | 53.0 | 4.68e-01 | 90.7% | 100.0% |
| 4137062 | 507.1.1.1 ↗ | alpha arrays › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB | 0.62 | 53.0 | 4.67e-01 | 91.8% | 99.3% |
| 4124640 | 874.1.1.2 ↗ | a+b duplicates or obligate multimers › Smc hinge domain › Smc hinge domain › Smc hinge domain › MukB_hinge | 0.60 | 43.0 | 3.04e-01 | 74.2% | 95.4% |
| 5051764 | 622.4.1.0 ↗ | alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related | 0.59 | 46.0 | 4.05e-01 | 85.6% | 59.4% |
| 3791995 | 220.1.1.37 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_13 | 0.59 | 44.0 | 3.78e-01 | 78.4% | 85.2% |
| 5026457 | 3926.1.1.1 ↗ | alpha bundles › V-type proton ATPase subunit D › V-type proton ATPase subunit D › V-type proton ATPase subunit D › ATP-synt_D | 0.59 | 42.0 | 3.30e-01 | 75.3% | 61.1% |
| 4457710 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.58 | 42.0 | 3.97e-01 | 76.3% | 75.8% |
| 3209881 | 109.4.1.207 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT_2 | 0.56 | 31.0 | 1.90e-01 | 91.8% | 8.5% |
| 3231448 | 220.1.1.22 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C | 0.56 | 45.0 | 3.82e-01 | 87.6% | 68.5% |
| 3573701 | 507.1.1.0 ↗ | alpha arrays › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related | 0.56 | 45.0 | 4.03e-01 | 86.6% | 100.0% |
| 3275470 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.56 | 49.0 | 3.78e-01 | 100.0% | 49.1% |
| 4537639 | 874.1.1.0 ↗ | a+b duplicates or obligate multimers › Smc hinge domain › Smc hinge domain › Smc hinge domain | 0.55 | 39.0 | 2.53e-01 | 75.3% | 59.0% |
| 4498285 | 245.2.1.1 ↗ | a+b two layers › Ribonuclease PH domain 2-like › YbaB › YbaB › YbaB_DNA_bd | 0.55 | 36.0 | 3.68e-01 | 73.2% | 68.4% |
| 3952816 | 245.2.1.2 ↗ | a+b two layers › Ribonuclease PH domain 2-like › YbaB › YbaB › DUF2710 | 0.55 | 32.0 | 3.86e-01 | 81.4% | 87.7% |
| 4949914 | 246.2.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos | 0.54 | 47.0 | 3.41e-01 | 97.9% | 45.7% |
| 4877165 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.53 | 44.0 | 3.69e-01 | 97.9% | 50.8% |
| 4929483 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.53 | 37.0 | 3.49e-01 | 76.3% | 59.2% |
| 4937908 | 220.1.1.87 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_3 | 0.52 | 42.0 | 3.64e-01 | 86.6% | 87.6% |
| 5064976 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.52 | 36.0 | 3.06e-01 | 93.8% | 43.1% |
| 3508939 | 220.1.1.13 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › DCP1 | 0.52 | 37.0 | 3.40e-01 | 74.2% | 61.5% |
| 4337520 | 245.2.1.1 ↗ | a+b two layers › Ribonuclease PH domain 2-like › YbaB › YbaB › YbaB_DNA_bd | 0.52 | 37.0 | 3.69e-01 | 74.2% | 81.0% |
| 4433045 | 507.1.1.0 ↗ | alpha arrays › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related | 0.52 | 40.0 | 3.62e-01 | 83.5% | 100.0% |
| 3956336 | 245.2.1.0 ↗ | a+b two layers › Ribonuclease PH domain 2-like › YbaB › YbaB | 0.52 | 44.0 | 4.14e-01 | 94.8% | 84.2% |
| 3786078 | 109.4.1.1764 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF28917 | 0.51 | 44.0 | 2.84e-01 | 96.9% | 48.9% |
| 3982792 | 330.1.1.14 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › RecT | 0.51 | 32.0 | 2.75e-01 | 95.9% | 40.7% |
| 4074424 | 3747.1.1.2 ↗ | a+b two layers › Flagellar hook protein FlgE D0 domain › Flagellar hook protein FlgE D0 domain › Flagellar hook protein FlgE D0 domain › Flg_bb_rod,Flg_bbr_C | 0.50 | 36.0 | 3.58e-01 | 74.2% | 100.0% |
| 3283205 | 245.2.1.0 ↗ | a+b two layers › Ribonuclease PH domain 2-like › YbaB › YbaB | 0.50 | 32.0 | 3.67e-01 | 70.1% | 90.0% |