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MT584811.1__QLB38276.1__phiGT1_64__00064

Bact-Vir

MT584811.1__QLB38276.1__phiGT1_64__00064

Identity

Accession:
MT584811 ↗
Kingdom:
phage

Quality

79.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Sulfitobacter_phage_phiGT1

TaxID: 2745703

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 15-78
PDB
Domain cluster: representative
CATH (16)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4osnA00 2.30.29.100 Mainly Beta › Roll › PH-domain like › 0.62 52.0 4.47e-01 98.4% 96.4%
4r8tB02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.59 44.0 4.31e-01 100.0% 74.0%
6my0A02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.59 46.0 4.67e-01 100.0% 87.7%
2byoA00 2.50.20.20 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › 0.57 39.0 2.97e-01 75.0% 94.5%
1sg5A01 2.30.30.400 Mainly Beta › Roll › SH3 type barrels. › Rof-like 0.56 46.0 4.42e-01 98.4% 80.5%
1vpkA01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.55 38.0 3.14e-01 71.9% 91.7%
6rtqA00 2.40.128.30 Mainly Beta › Beta Barrel › Lipocalin › Avidin-like 0.55 44.0 3.65e-01 95.3% 76.7%
1wgsA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.55 44.0 3.58e-01 96.9% 44.4%
2cocA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 45.0 4.00e-01 98.4% 86.0%
2kuqA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 45.0 3.54e-01 100.0% 49.7%
3pvlA04 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 45.0 3.98e-01 98.4% 76.8%
2ig6A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.53 42.0 3.41e-01 100.0% 42.7%
2p4tA00 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.53 41.0 4.29e-01 100.0% 98.3%
4a0tA03 2.60.320.30 Mainly Beta › Sandwich › mini-chromosome maintenance (MCM) complex, domain 2 › 0.51 44.0 3.99e-01 100.0% 72.2%
1fx0B01 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.51 39.0 3.76e-01 100.0% 72.2%
3ihpA03 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.50 41.0 2.70e-01 96.9% 38.8%
ECOD (29)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4118226 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 51.0 5.02e-01 100.0% 80.0%
4940673 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 48.0 4.98e-01 100.0% 86.7%
4357433 3529.1.1.0 ↗ beta sandwiches › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain 0.63 38.0 4.58e-01 95.3% 97.5%
3591792 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.63 53.0 4.24e-01 98.4% 71.0%
3738992 220.1.1.9 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Voldacs 0.63 53.0 4.06e-01 100.0% 69.1%
3220403 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.60 48.0 4.20e-01 92.2% 75.2%
3878271 101.1.2.284 ↗ alpha arrays › HTH › HTH › winged helix domain › WAC_Acf1_DNA_bd 0.59 47.0 3.62e-01 100.0% 36.8%
3184235 4.1.1.17 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 0.59 50.0 3.97e-01 100.0% 50.3%
3273105 9.1.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.59 50.0 4.35e-01 100.0% 97.1%
3225056 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.59 49.0 4.23e-01 98.4% 70.9%
3221103 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.58 46.0 4.05e-01 92.2% 74.3%
3740221 4.11.1.0 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.58 51.0 3.84e-01 100.0% 42.5%
3264641 2498.1.1.14 ↗ mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M8 0.57 45.0 2.71e-01 89.1% 13.0%
3761249 11.2.1.36 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › MAP10_N 0.57 42.0 3.39e-01 81.2% 83.0%
3339169 4.1.1.415 ↗ beta barrels › SH3 › SH3 › SH3 › PNPOx_N 0.56 47.0 4.41e-01 100.0% 81.2%
4027872 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.56 46.0 4.16e-01 98.4% 81.1%
632 4.7.1.2 ↗ beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › ROF 0.56 46.0 4.27e-01 98.4% 72.1%
3368959 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.53 39.0 2.82e-01 81.2% 58.5%
4944013 11.1.5.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.53 42.0 3.26e-01 90.6% 94.2%
3869436 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.52 44.0 3.87e-01 98.4% 73.0%
3242544 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.52 43.0 3.51e-01 96.9% 67.7%
3759458 11.2.1.58 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › PF26186 0.52 42.0 3.12e-01 95.3% 80.5%
3903484 220.1.1.64 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C1_MyoVII 0.52 43.0 3.71e-01 98.4% 67.3%
3368419 11.2.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.51 42.0 3.39e-01 98.4% 95.2%
3967527 4216.1.1.1 ↗ a+b duplicates or obligate multimers › Heme iron utilization protein-like › Heme iron utilization protein-like › Heme iron utilization protein-like › HemS 0.51 41.0 3.22e-01 100.0% 58.6%
4380236 4216.1.1.2 ↗ a+b duplicates or obligate multimers › Heme iron utilization protein-like › Heme iron utilization protein-like › Heme iron utilization protein-like › ChuX_HutX 0.50 41.0 3.14e-01 100.0% 49.2%
4122799 4004.1.1.3 ↗ beta sandwiches › NAD kinase beta sandwich domain-like › NAD kinase beta sandwich domain-like › NAD kinase beta sandwich domain-like › NAD_kinase_C 0.50 42.0 3.27e-01 100.0% 51.9%
2663669 4216.1.1.2 ↗ a+b duplicates or obligate multimers › Heme iron utilization protein-like › Heme iron utilization protein-like › Heme iron utilization protein-like › ChuX_HutX 0.50 41.0 3.24e-01 100.0% 55.0%
3516159 109.4.1.88 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › MUN 0.50 41.0 2.39e-01 96.9% 17.7%