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MT585315.1__QNJ54302.1__X__00070
Bact-VirMT585315.1__QNJ54302.1__X__00070
Identity
- Accession:
- MT585315 ↗
- Kingdom:
- phage
Quality
87.7
mean pLDDT
Taxonomy
TaxID: 2764993
Cluster
View cluster (5 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-51
Domain cluster:
representative
CATH (42)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7sk7A01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.82 | 70.0 | 4.39e-01 | 100.0% | 19.4% |
| 3besR03 | 6.10.140.1480 | Special › Helix non-globular › Helix Hairpins › | 0.81 | 65.0 | 6.37e-01 | 96.1% | 80.4% |
| 7um4A01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.79 | 69.0 | 4.40e-01 | 100.0% | 22.3% |
| 3r0qA02 | 2.70.160.11 | Mainly Beta › Distorted Sandwich › Hnrnp arginine n-methyltransferase1 › Hnrnp arginine n-methyltransferase1 | 0.77 | 68.0 | 4.48e-01 | 100.0% | 24.5% |
| 4mk6A00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.75 | 65.0 | 4.41e-01 | 100.0% | 27.1% |
| 5jazA03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.75 | 59.0 | 4.92e-01 | 90.2% | 49.5% |
| 1nafA02 | 1.20.58.160 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.73 | 52.0 | 4.38e-01 | 80.4% | 45.9% |
| 6grjB01 | 1.20.1170.10 | Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › | 0.73 | 54.0 | 3.30e-01 | 80.4% | 13.1% |
| 4ysxC00 | 1.20.1300.10 | Mainly Alpha › Up-down Bundle › 3 helical TM bundles of succinate and fumarate reductases › Fumarate reductase/succinate dehydrogenase, transmembrane subunit | 0.72 | 60.0 | 4.40e-01 | 100.0% | 35.3% |
| 4hteA01 | 1.20.58.1730 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.72 | 54.0 | 3.85e-01 | 82.4% | 28.7% |
| 3n5lA03 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.72 | 56.0 | 5.39e-01 | 88.2% | 75.4% |
| 4hwdD00 | 1.20.58.120 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain | 0.70 | 57.0 | 4.67e-01 | 88.2% | 53.3% |
| 3r6nB01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.70 | 56.0 | 3.62e-01 | 88.2% | 20.1% |
| 5k2xA00 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.69 | 57.0 | 3.38e-01 | 98.0% | 88.6% |
| 2optA02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.68 | 59.0 | 4.26e-01 | 98.0% | 57.6% |
| 2om6A02 | 1.10.150.400 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.68 | 49.0 | 4.47e-01 | 84.3% | 54.4% |
| 2q00B00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.68 | 52.0 | 3.82e-01 | 80.4% | 33.6% |
| 2lw1A00 | 1.10.287.380 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Valyl-tRNA synthetase, C-terminal domain | 0.68 | 54.0 | 4.52e-01 | 86.3% | 77.6% |
| 3l1nA02 | 1.20.1280.140 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.67 | 51.0 | 4.38e-01 | 90.2% | 50.6% |
| 1wp7A00 | 1.10.287.770 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YojJ-like | 0.67 | 55.0 | 5.11e-01 | 90.2% | 76.6% |
| 1jb0K00 | 1.20.860.20 | Mainly Alpha › Up-down Bundle › Alpha-t-alpha › Photosystem I PsaK, reaction centre | 0.67 | 52.0 | 5.33e-01 | 98.0% | 97.8% |
| 1jb0F00 | 1.10.8.110 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Photosystem I, reaction centre, subunit PsaF | 0.67 | 55.0 | 3.94e-01 | 100.0% | 32.6% |
| 4w4kA00 | 1.10.287.850 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain | 0.67 | 55.0 | 4.71e-01 | 92.2% | 92.7% |
| 2fb5A01 | 1.10.287.770 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YojJ-like | 0.67 | 54.0 | 4.78e-01 | 88.2% | 69.4% |
| 1k07A00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.66 | 58.0 | 3.67e-01 | 100.0% | 41.2% |
| 2i0mA02 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.66 | 57.0 | 4.55e-01 | 96.1% | 51.5% |
| 1kfdA02 | 1.20.1060.10 | Mainly Alpha › Up-down Bundle › Taq DNA Polymerase; Chain T, domain 4 › Taq DNA Polymerase; Chain T, domain 4 | 0.66 | 53.0 | 4.74e-01 | 88.2% | 71.8% |
| 4abmD00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.65 | 48.0 | 4.30e-01 | 82.4% | 55.8% |
| 1w36C06 | 1.10.10.990 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.65 | 51.0 | 4.65e-01 | 96.1% | 65.3% |
| 4m70B00 | 1.10.246.200 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › WPP domain | 0.64 | 56.0 | 4.65e-01 | 100.0% | 65.9% |
| 1chuA03 | 1.20.58.100 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain | 0.63 | 50.0 | 4.21e-01 | 88.2% | 52.3% |
| 3pe0A01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.62 | 49.0 | 3.97e-01 | 88.2% | 48.5% |
| 3d2fA04 | 3.90.640.10 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 | 0.62 | 52.0 | 4.42e-01 | 100.0% | 57.1% |
| 2q1kA00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.62 | 48.0 | 4.86e-01 | 90.2% | 86.5% |
| 1b3qA01 | 1.10.287.560 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Histidine kinase CheA-like, homodimeric domain | 0.61 | 50.0 | 4.75e-01 | 96.1% | 75.8% |
| 2btoA03 | 1.10.287.600 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.61 | 46.0 | 4.62e-01 | 88.2% | 88.9% |
| 3terA00 | 1.10.287.3550 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.60 | 54.0 | 4.06e-01 | 100.0% | 52.9% |
| 2f48A03 | 1.10.10.480 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Phosphofructokinase; domain 3 | 0.59 | 46.0 | 4.13e-01 | 86.3% | 61.3% |
| 4fppB01 | 1.10.287.130 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain | 0.59 | 50.0 | 4.45e-01 | 96.1% | 66.2% |
| 5dcaA11 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 48.0 | 3.86e-01 | 96.1% | 81.9% |
| 3l4aA00 | 1.10.238.20 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Pheromone/general odorant binding protein domain | 0.56 | 43.0 | 3.42e-01 | 90.2% | 38.0% |
| 8b6jF01 | 1.10.287.20 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Ubiquinol-cytochrome C reductase hinge domain | 0.53 | 43.0 | 4.06e-01 | 100.0% | 92.5% |
ECOD (58)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3585359 | 5076.1.1.1 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr | 0.87 | 78.0 | 4.75e-01 | 100.0% | 17.0% |
| 5063791 | 1075.3.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC importer transmembrane domain fold › Type I ABC importer transmembrane domain fold › BPD_transp_1 | 0.85 | 77.0 | 4.58e-01 | 100.0% | 97.9% |
| 3212581 | 148.1.3.289 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › PKK | 0.85 | 74.0 | 7.07e-01 | 98.0% | 90.0% |
| 5069130 | 6026.1.1.0 ↗ | alpha duplicates or obligate multimers › cwf21 domain › cwf21 domain › cwf21 domain | 0.84 | 72.0 | 7.27e-01 | 96.1% | 100.0% |
| 4353218 | 605.1.1.167 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › PKK | 0.84 | 74.0 | 6.50e-01 | 100.0% | 69.3% |
| 3411952 | 5076.1.1.1 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr | 0.82 | 72.0 | 4.44e-01 | 100.0% | 28.5% |
| 3401672 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.81 | 73.0 | 4.25e-01 | 100.0% | 14.2% |
| 3926367 | 5076.1.1.1 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr | 0.81 | 72.0 | 4.41e-01 | 100.0% | 17.3% |
| 3626979 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.81 | 71.0 | 4.96e-01 | 100.0% | 31.5% |
| 3610065 | 5076.1.1.1 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr | 0.80 | 68.0 | 4.20e-01 | 100.0% | 16.5% |
| 3270180 | 5063.1.1.0 ↗ | alpha bundles › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK | 0.80 | 69.0 | 5.76e-01 | 100.0% | 65.6% |
| 4032308 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.80 | 72.0 | 4.90e-01 | 100.0% | 51.2% |
| 4324592 | 5058.1.1.0 ↗ | alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region | 0.80 | 70.0 | 5.64e-01 | 100.0% | 52.0% |
| 3261624 | 3470.1.1.0 ↗ | extended segments › Glycophorin-A transmembrane domain › Glycophorin-A transmembrane domain › Glycophorin-A transmembrane domain | 0.79 | 69.0 | 7.00e-01 | 96.1% | 100.0% |
| 3245015 | 3831.1.1.0 ↗ | alpha bundles › Secreted protein of unknown function DUF1311 › Secreted protein of unknown function DUF1311 › Secreted protein of unknown function DUF1311 | 0.79 | 70.0 | 6.00e-01 | 100.0% | 75.0% |
| 3992094 | 604.39.1.0 ↗ | alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters | 0.79 | 67.0 | 4.59e-01 | 100.0% | 27.9% |
| 3995509 | 3730.1.1.0 ↗ | alpha arrays › CCM3/GCKIII dimerization domain › CCM3/GCKIII dimerization domain › CCM3/GCKIII dimerization domain | 0.78 | 68.0 | 6.33e-01 | 96.1% | 77.8% |
| 3398929 | 5041.1.1.32 ↗ | extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › TMEM141 | 0.78 | 67.0 | 5.66e-01 | 100.0% | 56.7% |
| 3224304 | 4120.1.1.30 ↗ | few secondary structure elements › Tim10/DDP › Tim10/DDP › Tim10/DDP › DUF842 | 0.78 | 70.0 | 5.86e-01 | 100.0% | 80.0% |
| 3575774 | 604.39.1.0 ↗ | alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters | 0.78 | 66.0 | 4.89e-01 | 100.0% | 36.4% |
| 4950718 | 246.3.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like › Exo_endo_phos | 0.77 | 68.0 | 4.11e-01 | 100.0% | 23.5% |
| 3786455 | 5076.1.1.1 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr | 0.77 | 66.0 | 4.09e-01 | 100.0% | 17.0% |
| 3941044 | 5076.1.1.1 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr | 0.77 | 67.0 | 4.17e-01 | 100.0% | 20.4% |
| 3690652 | 101.1.8.0 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes | 0.76 | 63.0 | 4.82e-01 | 92.2% | 40.9% |
| 4327215 | 547.1.1.1 ↗ | alpha duplicates or obligate multimers › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › GlutR_dimer | 0.76 | 66.0 | 5.11e-01 | 100.0% | 46.1% |
| 3956826 | 150.8.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › PPE › PPE | 0.76 | 67.0 | 4.62e-01 | 100.0% | 80.0% |
| 3795390 | 108.1.1.27 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_6 | 0.76 | 69.0 | 4.45e-01 | 100.0% | 25.1% |
| 4121314 | 547.1.1.1 ↗ | alpha duplicates or obligate multimers › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › GlutR_dimer | 0.74 | 61.0 | 5.04e-01 | 100.0% | 50.5% |
| 3208600 | 109.4.1.560 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Mus7 | 0.72 | 59.0 | 3.72e-01 | 100.0% | 16.8% |
| 3271908 | 210.2.1.0 ↗ | a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain | 0.72 | 61.0 | 3.91e-01 | 100.0% | 19.1% |
| 3249654 | 604.5.1.32 ↗ | alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › TMEM120A-B | 0.71 | 59.0 | 4.98e-01 | 88.2% | 56.2% |
| 3599060 | 101.1.8.0 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes | 0.71 | 55.0 | 3.76e-01 | 92.2% | 23.0% |
| 3193842 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.71 | 62.0 | 4.67e-01 | 100.0% | 68.0% |
| 3813837 | 622.4.1.0 ↗ | alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related | 0.71 | 52.0 | 4.69e-01 | 82.4% | 58.7% |
| 4034213 | 632.2.1.5 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Bacterial immunoglobulin/albumin-binding domains › Bacterial immunoglobulin/albumin-binding domains › DUF1542 | 0.70 | 60.0 | 5.27e-01 | 100.0% | 73.8% |
| 3309541 | 5063.1.1.17 ↗ | alpha bundles › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK › Gly-zipper_YMGG | 0.70 | 57.0 | 5.44e-01 | 92.2% | 100.0% |
| 3411151 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.70 | 56.0 | 5.11e-01 | 98.0% | 80.0% |
| 5018387 | 604.18.1.0 ↗ | alpha bundles › Spectrin repeat-like › Triple-helical domain in regulatory ATPase variant A (RavA) › Triple-helical domain in regulatory ATPase variant A (RavA) | 0.69 | 55.0 | 4.37e-01 | 88.2% | 44.8% |
| 5075987 | 150.1.1.1 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › Ferritin | 0.68 | 54.0 | 3.90e-01 | 88.2% | 34.7% |
| 143217 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.68 | 54.0 | 4.39e-01 | 88.2% | 45.9% |
| 3545789 | 3542.1.1.12 ↗ | alpha arrays › Presenilin family intramembrane aspartate proteases › Presenilin family intramembrane aspartate proteases › Presenilin family intramembrane aspartate proteases › TM7S3_TM198 | 0.68 | 57.0 | 3.89e-01 | 100.0% | 24.9% |
| 5014452 | 1075.1.1.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain | 0.67 | 57.0 | 3.78e-01 | 100.0% | 23.1% |
| 3320423 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.67 | 57.0 | 4.69e-01 | 100.0% | 76.0% |
| 5068089 | 283.1.1.0 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › Creatinase/aminopeptidase › Creatinase/aminopeptidase | 0.66 | 54.0 | 4.37e-01 | 100.0% | 44.3% |
| 3281670 | 101.1.2.49 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR,Vir_act_alpha_C | 0.66 | 51.0 | 3.60e-01 | 88.2% | 34.1% |
| 2720300 | 192.22.1.1 ↗ | alpha bundles › Long alpha-hairpin › Ral binding domain of RLIP76 › Ral binding domain of RLIP76 › RLIP76_Ral-bd | 0.65 | 50.0 | 5.08e-01 | 84.3% | 86.3% |
| 3961392 | 2004.1.1.197 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Sulfotransfer_3 | 0.65 | 55.0 | 3.78e-01 | 100.0% | 26.7% |
| 3934572 | 109.1.1.6 ↗ | alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C › GST_C_2 | 0.64 | 52.0 | 3.70e-01 | 96.1% | 32.9% |
| 3989860 | 191.1.1.12 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › TetR_C_8 | 0.64 | 53.0 | 4.44e-01 | 100.0% | 53.0% |
| 3907116 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.64 | 56.0 | 3.96e-01 | 96.1% | 34.0% |
| 3971109 | 5086.1.1.85 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HH_AAEA_pHBA | 0.64 | 50.0 | 4.46e-01 | 88.2% | 64.0% |
| 4174467 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.63 | 55.0 | 4.55e-01 | 96.1% | 67.8% |
| 3640760 | 3291.1.1.17 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › DUF202 | 0.63 | 55.0 | 4.34e-01 | 100.0% | 68.2% |
| 3496300 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.63 | 52.0 | 3.80e-01 | 100.0% | 34.0% |
| 1506147 | 3812.1.1.1 ↗ | alpha bundles › Type III secretion protein YscE › Type III secretion protein YscE › Type III secretion protein YscE › T3SS_needle_E | 0.62 | 48.0 | 4.86e-01 | 90.2% | 86.5% |
| 4023307 | 183.1.1.0 ↗ | alpha duplicates or obligate multimers › Iron-dependent repressor protein, dimerization domain › Iron-dependent repressor protein, dimerization domain › Iron-dependent repressor protein, dimerization domain | 0.61 | 44.0 | 4.05e-01 | 86.3% | 56.0% |
| 5052035 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.61 | 48.0 | 3.22e-01 | 100.0% | 43.1% |
| 5052557 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.59 | 51.0 | 3.42e-01 | 98.0% | 86.7% |
D2
high
residues 56-152
Domain cluster:
representative
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2eyqA05 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.71 | 36.0 | 4.55e-01 | 95.9% | 81.4% |
| 4exrA02 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.70 | 34.0 | 3.90e-01 | 89.7% | 62.0% |
| 1krlA00 | 6.20.50.130 | Special › Other non-globular › N-terminal domain of TfIIb › | 0.66 | 28.0 | 4.01e-01 | 100.0% | 86.4% |
| 2cqaA01 | 2.40.50.360 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RuvBL1 DNA/RNA binding domain | 0.60 | 42.0 | 4.71e-01 | 96.9% | 97.3% |
| 5fgoA00 | 3.10.450.700 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.59 | 30.0 | 3.69e-01 | 89.7% | 75.8% |
| 2lt1A00 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.57 | 32.0 | 3.54e-01 | 94.8% | 68.0% |
| 2lccA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 32.0 | 3.55e-01 | 95.9% | 72.4% |
| 2ytyA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.54 | 37.0 | 3.92e-01 | 97.9% | 78.4% |
| 4bsjA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 30.0 | 3.10e-01 | 99.0% | 60.0% |
| 3u12A00 | 2.30.29.180 | Mainly Beta › Roll › PH-domain like › Ubiquitin carboxyl-terminal hydrolase 26/29/37, pleckstrin homology-like domain | 0.53 | 38.0 | 3.79e-01 | 96.9% | 71.2% |
| 4u7mA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 33.0 | 3.36e-01 | 94.8% | 63.2% |
| 3ljyA00 | 2.160.20.120 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.52 | 40.0 | 2.96e-01 | 100.0% | 32.6% |
| 2lqkA00 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.52 | 30.0 | 3.34e-01 | 92.8% | 74.3% |
| 5gqoA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 40.0 | 4.06e-01 | 93.8% | 82.5% |
| 3k59A01 | 2.40.50.590 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › DNA polymerase B, N domain, beta-barrel | 0.51 | 37.0 | 3.93e-01 | 94.8% | 89.4% |
| 4fomA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 29.0 | 3.03e-01 | 94.8% | 57.6% |
| 1iz6A01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 28.0 | 3.16e-01 | 94.8% | 72.5% |
| 4xhzA03 | 2.60.40.60 | Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins | 0.51 | 31.0 | 3.04e-01 | 92.8% | 54.3% |
| 2kieA00 | 2.30.29.110 | Mainly Beta › Roll › PH-domain like › | 0.50 | 38.0 | 3.53e-01 | 93.8% | 62.9% |
| 1qw2A00 | 3.30.1980.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical protein Ta1206 fold › Hypothetical protein YunC | 0.50 | 29.0 | 2.91e-01 | 84.5% | 52.9% |
ECOD (21)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3995204 | 295.1.1.4 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › COMM_domain | 0.70 | 33.0 | 3.99e-01 | 100.0% | 66.2% |
| 4243492 | 243.3.1.3 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PepSY | 0.66 | 31.0 | 3.87e-01 | 88.7% | 71.7% |
| 165654 | 4.8.1.6 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot | 0.60 | 32.0 | 3.57e-01 | 97.9% | 64.9% |
| 3589823 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.57 | 30.0 | 3.59e-01 | 89.7% | 75.4% |
| 3241979 | 220.1.1.7 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › IRS | 0.57 | 40.0 | 3.94e-01 | 100.0% | 67.6% |
| 3770803 | 4.1.1.248 ↗ | beta barrels › SH3 › SH3 › SH3 › CABIT | 0.53 | 38.0 | 3.66e-01 | 96.9% | 65.5% |
| 3512104 | 922.1.1.9 ↗ | few secondary structure elements › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP1_2 | 0.53 | 29.0 | 3.57e-01 | 100.0% | 90.9% |
| 3842363 | 1.1.5.76 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › CABIT | 0.53 | 38.0 | 3.64e-01 | 96.9% | 65.5% |
| 3519583 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.53 | 29.0 | 3.04e-01 | 93.8% | 55.6% |
| 3838288 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.52 | 39.0 | 3.78e-01 | 95.9% | 68.7% |
| 3471067 | 2007.2.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase | 0.52 | 36.0 | 2.48e-01 | 100.0% | 21.9% |
| 3813657 | 220.1.1.172 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_PRMT_N | 0.52 | 40.0 | 3.91e-01 | 95.9% | 74.5% |
| 3893735 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.52 | 38.0 | 3.60e-01 | 77.3% | 97.4% |
| 5046188 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.51 | 37.0 | 4.12e-01 | 95.9% | 100.0% |
| 3500517 | 922.1.1.1 ↗ | few secondary structure elements › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP_1 | 0.51 | 27.0 | 3.31e-01 | 100.0% | 95.8% |
| 3496857 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.51 | 40.0 | 3.94e-01 | 95.9% | 78.1% |
| 3560835 | 2004.1.1.156 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 | 0.51 | 41.0 | 2.85e-01 | 87.6% | 68.5% |
| 5035327 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.51 | 38.0 | 3.99e-01 | 94.8% | 90.6% |
| 3190430 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.50 | 38.0 | 3.14e-01 | 99.0% | 42.2% |
| 4976092 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.50 | 31.0 | 3.19e-01 | 97.9% | 64.4% |
| 3574976 | 4184.1.1.2 ↗ | beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › MFP2b | 0.50 | 28.0 | 3.40e-01 | 81.4% | 92.7% |