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MT586120.1__QLF86163.1__CC030809_00107__00107

Bact-Vir

MT586120.1__QLF86163.1__CC030809_00107__00107

Identity

Accession:
MT586120 ↗
Kingdom:
phage

Quality

93.9 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pantevenvirales› Kyanoviridae› Mazuvirus› Synechococcus_phage_S-CAM7

TaxID: 1883368

Cluster

View cluster (5 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-62_92-117
PDB
Domain cluster: rep: 04302015_21_scaffold_10_prodigal-single.1__X__X__00335__D1-66_148-183_219-231
CATH (14)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2oaaB01 3.40.210.20 Alpha Beta › 3-Layer(aba) Sandwich › PvuII Endonuclease; Chain A › MvaI/BcnI restriction endonuclease, catalytic domain 0.78 68.0 6.39e-01 95.5% 92.6%
2odhA01 3.40.210.20 Alpha Beta › 3-Layer(aba) Sandwich › PvuII Endonuclease; Chain A › MvaI/BcnI restriction endonuclease, catalytic domain 0.74 67.0 5.95e-01 98.9% 96.7%
3ajvC02 3.40.1350.10 Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › 0.68 48.0 4.78e-01 72.7% 98.9%
2zyzC00 3.40.1350.10 Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › 0.68 47.0 4.64e-01 72.7% 89.6%
4esjA01 3.40.210.30 Alpha Beta › 3-Layer(aba) Sandwich › PvuII Endonuclease; Chain A › Dam replacing family, catalytic PD-(D/E)XK domain 0.67 54.0 4.50e-01 87.5% 92.9%
3w0eA00 3.30.10.10 Alpha Beta › 2-Layer Sandwich › Trypsin Inhibitor V; Chain A › Trypsin Inhibitor V, subunit A 0.65 47.0 5.12e-01 90.9% 97.1%
3sm4A00 3.90.320.10 Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › 0.60 42.0 3.21e-01 73.9% 51.1%
3qmfA01 3.30.540.10 Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 0.57 47.0 4.23e-01 96.6% 96.3%
6d6zA02 3.40.50.11440 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › LarA, N-terminal domain 0.55 44.0 3.28e-01 87.5% 93.1%
1a10I00 3.30.10.10 Alpha Beta › 2-Layer Sandwich › Trypsin Inhibitor V; Chain A › Trypsin Inhibitor V, subunit A 0.55 37.0 4.15e-01 86.4% 100.0%
1ekjA00 3.40.1050.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-carbonic Anhydrase; Chain A › Carbonic anhydrase 0.52 45.0 3.47e-01 97.7% 81.9%
5by7A02 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.51 40.0 3.47e-01 86.4% 98.6%
2yjgA02 3.40.50.11440 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › LarA, N-terminal domain 0.51 40.0 3.05e-01 88.6% 93.1%
1xmcB03 3.30.559.10 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain 0.50 40.0 3.28e-01 89.8% 83.6%
ECOD (23)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4211146 2008.1.1.27 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RAI1 0.72 65.0 4.19e-01 100.0% 67.6%
4098518 2008.1.1.27 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RAI1 0.72 65.0 4.22e-01 100.0% 66.3%
3415033 2008.1.1.27 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RAI1 0.72 65.0 4.26e-01 100.0% 67.8%
4882261 2008.1.1.27 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RAI1 0.70 64.0 4.18e-01 100.0% 69.1%
3263633 2008.1.1.27 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RAI1 0.70 63.0 4.18e-01 100.0% 70.3%
3620960 2008.1.1.147 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PF29557 0.69 61.0 4.05e-01 100.0% 68.2%
4590621 2008.1.1.27 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RAI1 0.68 61.0 4.06e-01 100.0% 68.1%
3514784 2008.1.1.147 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PF29557 0.68 61.0 4.06e-01 100.0% 70.3%
4014350 2008.1.1.0 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.66 60.0 3.99e-01 100.0% 68.4%
4311371 2008.1.1.6 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 0.64 45.0 4.10e-01 72.7% 95.8%
3499164 2008.1.1.0 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.64 49.0 3.36e-01 81.8% 78.1%
3638982 323.1.1.0 ↗ a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases 0.62 50.0 3.76e-01 87.5% 77.3%
3961432 323.1.1.3 ↗ a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.60 46.0 3.91e-01 85.2% 96.1%
3959215 323.1.1.3 ↗ a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.58 47.0 3.44e-01 92.0% 55.6%
3971554 323.1.1.0 ↗ a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases 0.55 44.0 3.58e-01 89.8% 75.7%
3700430 2004.5.1.3 ↗ a/b three-layered sandwiches › P-loop domains-like › Differentially expressed in normal cells and neoplasia (DENN) domain › Differentially expressed in normal cells and neoplasia (DENN) domain › DENN 0.55 42.0 3.10e-01 83.0% 42.4%
5065820 244.4.1.4 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › PF27537 0.54 43.0 3.43e-01 88.6% 48.6%
4934312 7601.1.1.0 ↗ a/b three-layered sandwiches › Lactate racemase N-terminal domain › Lactate racemase N-terminal domain › Lactate racemase N-terminal domain 0.53 43.0 3.28e-01 89.8% 91.6%
5069250 7601.1.1.1 ↗ a/b three-layered sandwiches › Lactate racemase N-terminal domain › Lactate racemase N-terminal domain › Lactate racemase N-terminal domain › Lar_N 0.52 43.0 3.12e-01 90.9% 91.8%
4163961 7582.1.1.0 ↗ a/b three-layered sandwiches › Rossmann-like domain in CbiD › Rossmann-like domain in CbiD › Rossmann-like domain in CbiD 0.51 45.0 4.09e-01 98.9% 86.7%
3172766 323.1.1.0 ↗ a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases 0.51 40.0 3.08e-01 89.8% 91.7%
5049579 7601.1.1.1 ↗ a/b three-layered sandwiches › Lactate racemase N-terminal domain › Lactate racemase N-terminal domain › Lactate racemase N-terminal domain › Lar_N 0.51 41.0 3.09e-01 90.9% 92.9%
4598878 7582.1.1.2 ↗ a/b three-layered sandwiches › Rossmann-like domain in CbiD › Rossmann-like domain in CbiD › Rossmann-like domain in CbiD › PF29030 0.50 42.0 3.46e-01 95.5% 91.8%
D2 medium residues 63-91_118-196
PDB
Domain cluster: rep: IMGVR_UViG_3300008119_000866-3300008119-Ga0114354_10071453__D67-84_126-202