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MT601273.1__QMV48998.1__Goe12_c00710__00069
Bact-VirMT601273.1__QMV48998.1__Goe12_c00710__00069
Identity
- Accession:
- MT601273 ↗
- Kingdom:
- phage
Quality
85.5
mean pLDDT
Taxonomy
TaxID: 2586960
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-187
Domain cluster:
rep: NC_021330__YP_008059651.1__M202-gp129__00089__D21-171
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF07693.21 best | KAP_NTPase | 23.4 | 4.50e-05 | 99.5% | 62.7% |
D2
medium
residues 192-338
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2w9zA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.72 | 50.0 | 5.25e-01 | 81.0% | 78.2% |
| 1aisB02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.72 | 45.0 | 5.42e-01 | 78.9% | 96.8% |
| 2ivxB01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.62 | 46.0 | 4.71e-01 | 81.6% | 79.3% |
| 3vkgA18 | 1.10.8.720 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Region D6 of dynein motor | 0.58 | 42.0 | 3.97e-01 | 74.8% | 70.5% |
| 1jkwA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.55 | 46.0 | 4.35e-01 | 92.5% | 73.9% |
| 1sqgA01 | 1.10.940.10 | Mainly Alpha › Orthogonal Bundle › N-utilizing Substance Protein B Homolog; Chain A › NusB-like | 0.55 | 42.0 | 4.34e-01 | 84.4% | 85.1% |
| 4rflA02 | 1.20.1090.10 | Mainly Alpha › Up-down Bundle › Dehydroquinate synthase-like, alpha domain › Dehydroquinate synthase-like - alpha domain | 0.54 | 41.0 | 3.72e-01 | 80.3% | 92.0% |
| 3gyuA00 | 1.10.565.10 | Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor | 0.53 | 42.0 | 3.57e-01 | 83.7% | 80.6% |
| 2hujA00 | 1.20.120.440 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › YppE-like | 0.53 | 32.0 | 3.40e-01 | 75.5% | 68.0% |
| 3tl4X01 | 1.10.8.1290 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Glutaminyl-tRNA synthetase, non-specific RNA binding region part 1, domain 1 | 0.51 | 37.0 | 4.08e-01 | 94.6% | 98.2% |
| 3k3fA00 | 1.10.3430.10 | Mainly Alpha › Orthogonal Bundle › Ammonium transporter fold › Ammonium transporter AmtB like domains | 0.51 | 45.0 | 3.52e-01 | 99.3% | 78.6% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3431012 | 101.1.10.7 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_C | 0.70 | 46.0 | 5.51e-01 | 80.3% | 99.0% |
| 3241490 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.69 | 45.0 | 5.13e-01 | 82.3% | 87.3% |
| 3901204 | 101.1.10.18 ↗ | alpha arrays › HTH › HTH › Cyclin-like › BRF2-like_C_cyclin_rpt | 0.68 | 51.0 | 4.96e-01 | 82.3% | 71.2% |
| 5078898 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.66 | 45.0 | 5.15e-01 | 79.6% | 94.5% |
| 3781982 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.60 | 49.0 | 4.75e-01 | 86.4% | 85.5% |
| 5073757 | 131.1.1.3 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD | 0.59 | 46.0 | 4.18e-01 | 83.0% | 86.3% |
| 3586873 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.57 | 33.0 | 3.87e-01 | 87.8% | 82.0% |
| 4003246 | 5067.1.1.5 ↗ | alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Sterol-sensing | 0.54 | 41.0 | 3.87e-01 | 80.3% | 75.0% |
| 4933903 | 5079.1.1.1 ↗ | alpha duplicates or obligate multimers › Magnesium transporter MgtE membrane domain › Magnesium transporter MgtE membrane domain › Magnesium transporter MgtE membrane domain › MgtE | 0.54 | 41.0 | 3.78e-01 | 78.2% | 96.2% |
| 4936055 | 604.39.1.17 ↗ | alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters › DUF2238 | 0.51 | 41.0 | 3.70e-01 | 85.0% | 86.3% |
| 4054419 | 604.12.1.78 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › FUSC | 0.51 | 37.0 | 3.56e-01 | 74.8% | 84.8% |
| 3282653 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.50 | 36.0 | 3.33e-01 | 72.8% | 73.7% |
| 3756763 | 593.1.1.0 ↗ | alpha bundles › GroEL equatorial domain-like › GroEL equatorial domain-like › GroEL equatorial domain-like | 0.50 | 45.0 | 3.55e-01 | 98.6% | 80.6% |
| 3285253 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.50 | 35.0 | 3.11e-01 | 70.1% | 66.5% |
D3
medium
residues 339-481
Domain cluster:
representative
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1cnt200 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.62 | 36.0 | 3.77e-01 | 77.6% | 62.3% |
| 1t98A02 | 1.20.58.590 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Chromosome partition protein MukF, middle domain | 0.62 | 43.0 | 4.14e-01 | 70.6% | 95.1% |
| 1xioA00 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.59 | 44.0 | 3.85e-01 | 77.6% | 72.4% |
| 1w99A01 | 1.20.190.10 | Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › Pesticidal crystal protein, N-terminal domain | 0.57 | 45.0 | 4.20e-01 | 90.9% | 68.2% |
| 3rh3A01 | 1.20.120.930 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Uncharacterised protein PF12889, N-terminal DUF3829 | 0.56 | 35.0 | 3.62e-01 | 81.8% | 66.2% |
| 1zb1A00 | 1.25.40.280 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › alix/aip1 like domains | 0.56 | 49.0 | 3.74e-01 | 100.0% | 55.3% |
| 1zvzA02 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.55 | 36.0 | 3.83e-01 | 88.1% | 75.0% |
| 2xq9A02 | 1.20.58.390 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Neurotransmitter-gated ion-channel transmembrane domain | 0.55 | 34.0 | 3.67e-01 | 76.2% | 72.7% |
| 4ks9A01 | 1.20.140.90 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Malonyl-CoA decarboxylase, oligemerization domain | 0.54 | 39.0 | 4.17e-01 | 76.2% | 100.0% |
| 2jqqA00 | 1.20.58.1240 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.54 | 42.0 | 4.16e-01 | 83.9% | 80.5% |
| 1orsC00 | 1.20.120.350 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels. Chain C | 0.53 | 34.0 | 3.61e-01 | 98.6% | 70.5% |
| 4epzA00 | 1.25.40.810 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › UpxZ | 0.52 | 37.0 | 3.66e-01 | 73.4% | 67.5% |
| 4v19R01 | 3.90.1030.10 | Alpha Beta › Alpha-Beta Complex › 50s Ribosomal Protein L17; Chain: A, › Ribosomal protein L17 | 0.51 | 32.0 | 3.57e-01 | 85.3% | 79.5% |
| 5tgzA01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.50 | 38.0 | 3.00e-01 | 78.3% | 68.8% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5029616 | 109.3.1.487 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › DUF5667 | 0.59 | 54.0 | 4.10e-01 | 100.0% | 83.5% |
| 4001551 | 109.4.1.210 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_19 | 0.56 | 43.0 | 4.14e-01 | 100.0% | 70.0% |
| 3216422 | 109.4.1.210 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_19 | 0.56 | 43.0 | 3.95e-01 | 100.0% | 62.1% |
| 5009461 | 5069.1.1.0 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes | 0.55 | 34.0 | 3.40e-01 | 71.3% | 60.7% |
| 3797929 | 109.4.1.95 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_2 | 0.55 | 42.0 | 3.93e-01 | 100.0% | 64.4% |
| 3764741 | 109.4.1.559 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Tuberin | 0.55 | 47.0 | 4.60e-01 | 93.0% | 96.8% |
| 3187407 | 633.10.1.4 ↗ | alpha bundles › Bromodomain-like › IVS-encoded protein-like › IVS-encoded protein-like › DUF3429 | 0.54 | 37.0 | 3.52e-01 | 81.8% | 57.6% |
| 4025386 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.53 | 42.0 | 4.29e-01 | 99.3% | 88.4% |
| 1146575 | 109.39.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › transcription anti-terminator antagonist UpxZ › transcription anti-terminator antagonist UpxZ › UpxZ | 0.52 | 37.0 | 3.66e-01 | 73.4% | 67.5% |
| 3854499 | 109.4.1.319 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1,TPR_2 | 0.52 | 41.0 | 3.67e-01 | 86.7% | 59.1% |
| 3310921 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.52 | 44.0 | 3.79e-01 | 91.6% | 91.1% |
| 3503333 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.51 | 41.0 | 3.82e-01 | 85.3% | 86.3% |
| 4146380 | 4133.1.1.2 ↗ | alpha arrays › Emsy N terminal (ENT) domain-like › Emsy N terminal (ENT) domain-like › Emsy N terminal (ENT) domain-like › Tic110 | 0.50 | 39.0 | 4.11e-01 | 93.0% | 90.8% |
| 3709586 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.50 | 41.0 | 3.85e-01 | 87.4% | 87.4% |
| 3335971 | 109.4.1.1394 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1, TPR_8, TPR_12 | 0.50 | 39.0 | 3.24e-01 | 94.4% | 45.4% |
| 3902164 | 604.1.1.1 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin | 0.50 | 39.0 | 4.19e-01 | 83.9% | 95.2% |
D4
medium
residues 482-565
Domain cluster:
representative
CATH (51)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3mzoB00 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.67 | 60.0 | 4.51e-01 | 100.0% | 40.0% |
| 2zueA03 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.67 | 50.0 | 4.43e-01 | 78.6% | 61.3% |
| 1ldjA01 | 1.20.1310.10 | Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats | 0.64 | 51.0 | 4.54e-01 | 89.3% | 88.0% |
| 1b3uA00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.64 | 55.0 | 3.34e-01 | 98.8% | 26.9% |
| 4hehA01 | 1.10.1240.10 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain | 0.64 | 52.0 | 5.31e-01 | 90.5% | 92.8% |
| 3r2qA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.63 | 56.0 | 5.13e-01 | 100.0% | 85.0% |
| 2mabA00 | 1.10.10.1350 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Spidroin domain, C-terminal domain | 0.63 | 54.0 | 4.96e-01 | 95.2% | 87.2% |
| 2kj8A00 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.63 | 51.0 | 4.58e-01 | 90.5% | 63.6% |
| 8amzP01 | 1.25.40.570 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.63 | 53.0 | 3.49e-01 | 97.6% | 21.3% |
| 5cwhA01 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.62 | 54.0 | 4.44e-01 | 97.6% | 75.0% |
| 2mx8A01 | 1.10.274.70 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Spidroin, N-terminal domain | 0.62 | 52.0 | 4.81e-01 | 95.2% | 79.6% |
| 2wpvE00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.62 | 53.0 | 3.79e-01 | 100.0% | 51.8% |
| 2l3lA01 | 1.20.58.1250 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Tubulin Binding Cofactor C, N-terminal domain | 0.62 | 48.0 | 4.52e-01 | 86.9% | 74.5% |
| 6l1kA02 | 1.20.1090.10 | Mainly Alpha › Up-down Bundle › Dehydroquinate synthase-like, alpha domain › Dehydroquinate synthase-like - alpha domain | 0.61 | 52.0 | 4.03e-01 | 96.4% | 66.5% |
| 1s35A02 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.61 | 48.0 | 4.48e-01 | 88.1% | 90.0% |
| 3feyA02 | 1.25.40.180 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.60 | 51.0 | 4.03e-01 | 97.6% | 65.1% |
| 4q5nA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.60 | 53.0 | 4.84e-01 | 98.8% | 84.8% |
| 2imiB02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.60 | 46.0 | 3.95e-01 | 100.0% | 50.0% |
| 7y3eA01 | 1.20.1530.20 | Mainly Alpha › Up-down Bundle › Na+/H+ antiporter like fold › | 0.60 | 52.0 | 3.39e-01 | 100.0% | 21.4% |
| 1sz9C00 | 1.25.40.90 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.60 | 49.0 | 4.21e-01 | 100.0% | 55.7% |
| 3ay8A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.59 | 46.0 | 3.93e-01 | 100.0% | 51.5% |
| 1ya0A01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.59 | 52.0 | 3.96e-01 | 100.0% | 51.5% |
| 1hu3A00 | 1.25.40.180 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.59 | 49.0 | 3.85e-01 | 97.6% | 41.2% |
| 2l1lB00 | 1.20.1440.250 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.59 | 51.0 | 4.51e-01 | 100.0% | 66.1% |
| 2ycdA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.58 | 46.0 | 4.12e-01 | 100.0% | 60.7% |
| 1chuA03 | 1.20.58.100 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain | 0.58 | 47.0 | 4.73e-01 | 91.7% | 89.8% |
| 3ro3A00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.58 | 46.0 | 3.80e-01 | 97.6% | 45.9% |
| 3gw4A00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.58 | 44.0 | 3.45e-01 | 98.8% | 36.5% |
| 1f2eA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.58 | 49.0 | 4.60e-01 | 95.2% | 79.2% |
| 5cwkA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.57 | 49.0 | 3.97e-01 | 98.8% | 48.8% |
| 3beyD00 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.57 | 39.0 | 3.84e-01 | 79.8% | 63.8% |
| 4n5cD06 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.57 | 42.0 | 3.86e-01 | 94.0% | 58.4% |
| 5xdcB01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.57 | 46.0 | 4.26e-01 | 91.7% | 100.0% |
| 3ic8A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.57 | 49.0 | 4.71e-01 | 100.0% | 89.1% |
| 1z9eA00 | 1.20.930.10 | Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 0.56 | 44.0 | 4.43e-01 | 91.7% | 86.7% |
| 2ebfX02 | 1.20.140.180 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › | 0.56 | 45.0 | 3.85e-01 | 95.2% | 52.4% |
| 4mk3A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.56 | 48.0 | 4.40e-01 | 98.8% | 81.7% |
| 3sl9B00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.56 | 48.0 | 3.91e-01 | 97.6% | 69.1% |
| 1wn0A00 | 1.20.120.160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain | 0.56 | 44.0 | 3.91e-01 | 95.2% | 57.3% |
| 2vkjA00 | 1.20.58.2030 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.55 | 43.0 | 4.05e-01 | 97.6% | 69.8% |
| 4rngC00 | 1.20.1280.290 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.54 | 41.0 | 4.16e-01 | 82.1% | 94.0% |
| 3s63A00 | 1.10.225.10 | Mainly Alpha › Orthogonal Bundle › NK-Lysin › Saposin-like | 0.54 | 37.0 | 3.69e-01 | 71.4% | 88.6% |
| 1n2aA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.54 | 46.0 | 4.37e-01 | 100.0% | 81.1% |
| 2ccyA00 | 1.20.120.10 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c/b562 | 0.53 | 45.0 | 4.00e-01 | 96.4% | 93.7% |
| 3pasA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.53 | 45.0 | 3.58e-01 | 100.0% | 56.3% |
| 2a0bA00 | 1.20.120.160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain | 0.53 | 42.0 | 3.81e-01 | 95.2% | 62.7% |
| 4b0zA00 | 1.25.40.990 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.53 | 45.0 | 3.40e-01 | 98.8% | 45.8% |
| 2bkkC02 | 3.90.1200.10 | Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe | 0.52 | 45.0 | 3.62e-01 | 98.8% | 88.4% |
| 3k3oA02 | 1.20.58.1360 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.51 | 44.0 | 4.44e-01 | 95.2% | 96.4% |
| 2ra1A03 | 1.20.58.770 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.51 | 36.0 | 3.96e-01 | 90.5% | 100.0% |
| 3f4mA00 | 1.20.1440.160 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Tumor necrosis factor alpha-induced protein 8-like | 0.50 | 38.0 | 3.27e-01 | 85.7% | 53.9% |
ECOD (45)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3741609 | 109.58.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › DNA repair protein Rev1 C-terminal domain › DNA repair protein Rev1 C-terminal domain › REV1_C | 0.73 | 62.0 | 5.99e-01 | 92.9% | 84.2% |
| 4024592 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.69 | 61.0 | 4.22e-01 | 100.0% | 31.7% |
| 3279499 | 109.4.1.1792 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DUF5682 | 0.66 | 58.0 | 4.47e-01 | 100.0% | 58.0% |
| 5075584 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.66 | 58.0 | 4.61e-01 | 98.8% | 70.3% |
| 3782169 | 109.4.1.628 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Sec7-like_HUS | 0.63 | 55.0 | 3.48e-01 | 100.0% | 18.3% |
| 4936633 | 3877.1.1.0 ↗ | alpha bundles › Membrane protein insertase YidC-related › Membrane protein insertase YidC-related › Membrane protein insertase YidC | 0.63 | 48.0 | 3.71e-01 | 84.5% | 81.5% |
| 5063507 | 3236.1.1.1 ↗ | alpha complex topology › Cation-proton antiporter › Cation-proton antiporter (CPA) › Cation-proton antiporter (CPA) › Na_H_Exchanger | 0.63 | 52.0 | 3.48e-01 | 95.2% | 22.7% |
| 4569 | 109.4.1.290 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PrgX_C_TPR | 0.62 | 48.0 | 3.64e-01 | 97.6% | 31.6% |
| 3252121 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.62 | 54.0 | 4.19e-01 | 97.6% | 44.2% |
| 3534896 | 109.4.1.371 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RTP1_C1 | 0.62 | 53.0 | 3.29e-01 | 97.6% | 21.5% |
| 4029706 | 109.4.1.111 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PUL | 0.62 | 55.0 | 3.83e-01 | 100.0% | 56.6% |
| 3222403 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.62 | 52.0 | 4.16e-01 | 98.8% | 45.9% |
| 4301459 | 109.4.1.1913 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Ipi1_N, TPR_TEX10 | 0.62 | 53.0 | 3.07e-01 | 97.6% | 15.0% |
| 3660543 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.62 | 52.0 | 4.25e-01 | 100.0% | 49.7% |
| 3396473 | 109.38.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › Telomere length regulation protein TEL2 › Telomere length regulation protein TEL2 › Telomere_reg-2 | 0.62 | 54.0 | 3.15e-01 | 98.8% | 21.8% |
| 3658802 | 109.46.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › Helical domain in TOPLESS related protein 2 (TPR2) › Helical domain in TOPLESS related protein 2 (TPR2) › TPR1-like_2nd | 0.62 | 45.0 | 4.39e-01 | 94.0% | 69.5% |
| 3781283 | 109.4.1.930 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ARM_ECM29_C | 0.61 | 53.0 | 3.76e-01 | 100.0% | 31.1% |
| 3410825 | 109.40.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › DNA polymerase alpha-binding protein Ctf4 C-terminal domain › DNA polymerase alpha-binding protein Ctf4 C-terminal domain › Hira | 0.61 | 51.0 | 4.25e-01 | 100.0% | 51.0% |
| 3197493 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.61 | 52.0 | 4.45e-01 | 97.6% | 73.6% |
| 3169559 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.60 | 51.0 | 3.11e-01 | 97.6% | 20.7% |
| 3844798 | 604.3.1.0 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain | 0.60 | 46.0 | 4.95e-01 | 85.7% | 100.0% |
| 3778778 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.60 | 51.0 | 3.55e-01 | 97.6% | 27.9% |
| 3257394 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.59 | 52.0 | 4.51e-01 | 98.8% | 61.5% |
| 5068379 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.59 | 48.0 | 4.47e-01 | 97.6% | 70.5% |
| 3564106 | 604.1.1.1 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin | 0.59 | 45.0 | 4.25e-01 | 83.3% | 95.2% |
| 3509834 | 109.4.1.142 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › CSN8_PSD8_EIF3K | 0.59 | 51.0 | 3.65e-01 | 97.6% | 33.2% |
| 3282593 | 4121.1.1.1 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA | 0.59 | 50.0 | 3.67e-01 | 96.4% | 63.3% |
| 1000622 | 109.4.1.251 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › CRM1_repeat_3 | 0.59 | 51.0 | 4.51e-01 | 100.0% | 66.1% |
| 3917769 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.58 | 38.0 | 3.06e-01 | 96.4% | 32.0% |
| 4214723 | 109.4.1.1248 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DUF2753 | 0.58 | 49.0 | 4.32e-01 | 97.6% | 68.5% |
| 3693818 | 109.4.1.146 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Cohesin_load | 0.58 | 50.0 | 2.96e-01 | 96.4% | 16.9% |
| 3728662 | 3924.1.1.1 ↗ | alpha complex topology › Sterol uptake control protein 2 › Sterol uptake control protein 2 › Sterol uptake control protein 2 › Fungal_trans_2 | 0.57 | 50.0 | 3.92e-01 | 100.0% | 44.9% |
| 4949961 | 109.7.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Cytochrome c oxidase subunit E › Cytochrome c oxidase subunit E | 0.57 | 43.0 | 4.64e-01 | 89.3% | 98.6% |
| 3212050 | 109.4.1.142 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › CSN8_PSD8_EIF3K | 0.57 | 49.0 | 3.63e-01 | 98.8% | 47.4% |
| 4647208 | 109.4.1.1259 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT_PBS, HEAT_2 | 0.56 | 48.0 | 3.72e-01 | 97.6% | 65.5% |
| 3519253 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.56 | 42.0 | 3.88e-01 | 97.6% | 60.9% |
| 3602005 | 650.1.1.0 ↗ | alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain | 0.55 | 40.0 | 4.16e-01 | 77.4% | 95.0% |
| 3703922 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.55 | 48.0 | 3.82e-01 | 100.0% | 71.7% |
| 3452645 | 101.35.1.31 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › Gliadin | 0.54 | 38.0 | 3.72e-01 | 73.8% | 72.6% |
| 4497602 | 601.3.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine-containing phosphotransfer domain, HPT domain › Histidine-containing phosphotransfer domain, HPT domain › Hpt | 0.54 | 46.0 | 4.17e-01 | 95.2% | 70.4% |
| 3505926 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.54 | 47.0 | 3.23e-01 | 100.0% | 27.8% |
| 3942717 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.53 | 45.0 | 3.79e-01 | 96.4% | 77.3% |
| 4278019 | 195.1.1.1 ↗ | alpha complex topology › NusB-like › NusB-like › NusB-like › NusB | 0.52 | 43.0 | 3.62e-01 | 95.2% | 91.3% |
| 3642502 | 109.4.1.1171 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Arm_PDR | 0.51 | 41.0 | 3.77e-01 | 86.9% | 70.9% |
| 3741700 | 109.40.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › DNA polymerase alpha-binding protein Ctf4 C-terminal domain › DNA polymerase alpha-binding protein Ctf4 C-terminal domain › Ctf4_C | 0.51 | 44.0 | 4.03e-01 | 96.4% | 93.9% |