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MT639639.1__QNJ55399.1__SEA_LITTLEFELLA_88__00088

Bact-Vir

MT639639.1__QNJ55399.1__SEA_LITTLEFELLA_88__00088

Identity

Accession:
MT639639 ↗
Kingdom:
phage

Quality

91.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Terapinvirus› Gordonia_phage_LittleFella

TaxID: 2762411

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 10-59
PDB
Domain cluster: representative
CATH (48)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1b7tA02 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.79 66.0 6.52e-01 100.0% 86.5%
5i4eA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.74 58.0 6.00e-01 94.0% 91.3%
7cfdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.73 60.0 5.25e-01 100.0% 61.6%
3goxA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.73 64.0 6.36e-01 100.0% 94.1%
2fjrA02 2.10.109.10 Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A 0.72 53.0 4.10e-01 100.0% 35.4%
3a2yA00 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.70 62.0 4.17e-01 100.0% 39.5%
2dfuA01 2.30.30.370 Mainly Beta › Roll › SH3 type barrels. › FAH 0.68 48.0 5.07e-01 100.0% 86.4%
2cudA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.68 61.0 5.18e-01 100.0% 69.6%
4c5eC02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.68 60.0 4.83e-01 100.0% 79.2%
2dmoA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.68 61.0 5.48e-01 100.0% 79.4%
6bogA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.68 55.0 5.49e-01 100.0% 88.5%
2vobB02 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.68 60.0 3.91e-01 100.0% 34.1%
2ct4A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.68 61.0 5.42e-01 100.0% 80.0%
1y71A00 2.30.30.430 Mainly Beta › Roll › SH3 type barrels. › Kinase associated protein B domain 0.67 61.0 4.65e-01 100.0% 52.3%
3udcA02 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.67 51.0 5.13e-01 100.0% 84.0%
2rqrA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.67 59.0 4.47e-01 100.0% 47.1%
2dl5A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.67 60.0 5.12e-01 100.0% 71.8%
3feoB02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.67 59.0 4.97e-01 100.0% 78.3%
5ajiB02 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.66 52.0 5.27e-01 100.0% 88.0%
1lckA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.66 59.0 5.60e-01 100.0% 93.2%
2jxbA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.66 58.0 4.85e-01 100.0% 62.8%
7razA01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.65 50.0 4.30e-01 100.0% 50.6%
1x6bA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.65 56.0 5.22e-01 100.0% 85.9%
3npfA02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 57.0 5.09e-01 100.0% 88.6%
4iimA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 57.0 5.49e-01 100.0% 93.0%
2hbpA00 2.30.30.700 Mainly Beta › Roll › SH3 type barrels. › SLA1 homology domain 1 0.64 54.0 4.94e-01 100.0% 72.7%
2kjzA01 3.30.720.120 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › 0.62 38.0 3.79e-01 86.0% 55.6%
7u32F02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.62 54.0 5.40e-01 100.0% 98.0%
3h41A02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.60 51.0 4.70e-01 100.0% 89.7%
1q1uA00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.58 47.0 3.57e-01 100.0% 94.2%
1ml8A01 2.20.25.10 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.58 35.0 3.90e-01 76.0% 82.4%
2yugA00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.57 47.0 3.46e-01 100.0% 80.6%
3gvpA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.57 39.0 2.84e-01 90.0% 23.3%
5g56A03 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.56 45.0 3.54e-01 100.0% 100.0%
4dzoA02 3.30.457.60 Alpha Beta › 2-Layer Sandwich › Copper Amine Oxidase; Chain A, domain 1 › 0.56 41.0 3.65e-01 82.0% 80.5%
3kewA01 2.40.30.130 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.55 42.0 3.69e-01 88.0% 73.8%
3vsfA02 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.55 44.0 3.39e-01 100.0% 97.9%
1jlxA02 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.54 45.0 3.39e-01 100.0% 97.1%
2p39A00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.53 43.0 3.28e-01 100.0% 87.3%
7s5oA01 3.50.70.20 Alpha Beta › 3-Layer(bba) Sandwich › Chalcone isomerase › Cytochrome P460 0.53 42.0 3.13e-01 90.0% 50.7%
6iq1A00 3.30.428.10 Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › HIT-like 0.53 39.0 3.01e-01 88.0% 65.0%
1khbA03 3.90.228.20 Alpha Beta › Alpha-Beta Complex › Phosphoenolpyruvate Carboxykinase; domain 3 › 0.53 44.0 2.84e-01 100.0% 52.6%
1sr4A00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.53 41.0 2.99e-01 94.0% 53.9%
3nqkA02 2.40.128.440 Mainly Beta › Beta Barrel › Lipocalin › Uncharacterised protein PF14274, DUF4361 0.53 41.0 3.12e-01 100.0% 88.1%
6i18A04 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.52 39.0 3.25e-01 88.0% 68.2%
3wmvB00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.52 42.0 3.17e-01 100.0% 97.3%
4gouA02 2.30.29.200 Mainly Beta › Roll › PH-domain like › 0.51 40.0 3.02e-01 100.0% 55.1%
4govA01 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.50 39.0 3.07e-01 94.0% 60.3%
ECOD (76)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4369736 4.1.1.175 ↗ beta barrels › SH3 › SH3 › SH3 › MSSS 0.91 66.0 6.99e-01 100.0% 84.4%
4031578 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.90 65.0 6.55e-01 100.0% 76.0%
5042477 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.87 63.0 6.59e-01 98.0% 84.4%
4182977 4.1.1.297 ↗ beta barrels › SH3 › SH3 › SH3 › YajC 0.84 61.0 5.77e-01 100.0% 65.0%
4950396 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.82 62.0 6.03e-01 100.0% 74.5%
5075805 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.81 65.0 6.28e-01 100.0% 78.2%
3404936 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.81 67.0 6.75e-01 100.0% 88.0%
5033075 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.81 64.0 6.22e-01 100.0% 78.2%
5057234 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.80 66.0 5.76e-01 100.0% 62.9%
3938589 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.79 65.0 6.55e-01 100.0% 88.0%
4952887 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.79 63.0 6.13e-01 100.0% 78.2%
4947995 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.79 63.0 6.17e-01 100.0% 80.0%
4024915 4.1.1.237 ↗ beta barrels › SH3 › SH3 › SH3 › KOW4_SPT5 0.78 69.0 6.24e-01 100.0% 73.8%
5040416 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.76 60.0 6.01e-01 100.0% 86.0%
3603357 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.76 63.0 6.12e-01 100.0% 81.8%
3795384 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.76 66.0 4.23e-01 100.0% 22.3%
3181766 4.1.1.237 ↗ beta barrels › SH3 › SH3 › SH3 › KOW4_SPT5 0.75 63.0 5.46e-01 100.0% 61.3%
4946165 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 60.0 5.85e-01 100.0% 80.0%
4403216 4.1.1.237 ↗ beta barrels › SH3 › SH3 › SH3 › KOW4_SPT5 0.75 63.0 5.59e-01 100.0% 65.7%
3942297 4.11.1.3 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Phage_CI_C 0.75 55.0 4.24e-01 100.0% 35.4%
5017214 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 60.0 5.85e-01 100.0% 80.0%
3451171 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 67.0 6.07e-01 100.0% 75.4%
3264808 4.1.1.237 ↗ beta barrels › SH3 › SH3 › SH3 › KOW4_SPT5 0.74 65.0 5.77e-01 100.0% 68.6%
3924375 4.1.1.237 ↗ beta barrels › SH3 › SH3 › SH3 › KOW4_SPT5 0.74 68.0 5.83e-01 100.0% 73.3%
3296865 4.1.1.237 ↗ beta barrels › SH3 › SH3 › SH3 › KOW4_SPT5 0.74 64.0 4.97e-01 100.0% 45.7%
4992872 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 59.0 5.77e-01 100.0% 81.8%
4567996 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 63.0 5.00e-01 98.0% 100.0%
3703933 4.1.1.237 ↗ beta barrels › SH3 › SH3 › SH3 › KOW4_SPT5 0.72 66.0 5.97e-01 100.0% 81.5%
3629316 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 65.0 5.12e-01 100.0% 52.0%
5044373 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 59.0 5.56e-01 100.0% 75.0%
3627859 4.1.1.237 ↗ beta barrels › SH3 › SH3 › SH3 › KOW4_SPT5 0.71 65.0 5.61e-01 100.0% 73.3%
5025079 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 57.0 5.59e-01 100.0% 81.8%
5028692 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.71 55.0 5.10e-01 100.0% 66.2%
3961546 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.71 56.0 5.16e-01 100.0% 67.7%
3947085 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.71 56.0 5.03e-01 100.0% 62.9%
4972872 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.70 55.0 5.74e-01 100.0% 95.6%
5036616 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.70 57.0 5.11e-01 100.0% 64.3%
2700914 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.70 59.0 5.04e-01 100.0% 58.7%
3704356 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 59.0 5.10e-01 100.0% 60.0%
4964421 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.70 55.0 5.08e-01 100.0% 67.7%
3797602 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 61.0 5.43e-01 98.0% 98.6%
3368864 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.69 62.0 5.70e-01 100.0% 83.1%
3480350 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.69 63.0 5.73e-01 100.0% 83.1%
3678872 4.1.1.239 ↗ beta barrels › SH3 › SH3 › SH3 › SH3-B_UBE2O 0.69 64.0 5.47e-01 100.0% 86.7%
4952854 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.69 55.0 5.05e-01 100.0% 67.7%
4474739 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 62.0 5.38e-01 100.0% 73.3%
4030603 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 63.0 5.64e-01 100.0% 77.9%
5036647 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.69 54.0 4.89e-01 100.0% 62.9%
5043091 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.69 55.0 4.96e-01 100.0% 64.7%
3501560 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 62.0 5.04e-01 100.0% 68.9%
4990212 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 54.0 5.32e-01 100.0% 81.8%
5040230 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.68 54.0 4.99e-01 100.0% 67.7%
3495480 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.68 61.0 5.73e-01 100.0% 90.0%
3886032 4.1.1.34 ↗ beta barrels › SH3 › SH3 › SH3 › MBT 0.68 60.0 4.69e-01 100.0% 54.3%
3575066 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.68 60.0 5.64e-01 100.0% 98.3%
3713613 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 61.0 5.54e-01 100.0% 87.7%
3765126 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.67 60.0 5.84e-01 100.0% 100.0%
3929784 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 59.0 6.00e-01 100.0% 98.0%
3839972 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.67 52.0 4.62e-01 100.0% 58.7%
3976863 4.11.1.3 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Phage_CI_C 0.67 48.0 3.87e-01 100.0% 38.1%
4959192 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.67 53.0 4.89e-01 100.0% 67.7%
5075354 4.10.1.0 ↗ beta barrels › SH3 › Fumarylacetoacetate hydrolase, FAH, N-terminal domain › Fumarylacetoacetate hydrolase, FAH, N-terminal domain 0.66 55.0 4.66e-01 98.0% 97.8%
3489469 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 57.0 4.53e-01 100.0% 79.0%
3931418 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 57.0 5.42e-01 100.0% 90.0%
4056584 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.65 57.0 4.90e-01 100.0% 66.3%
4956695 4.15.1.0 ↗ beta barrels › SH3 › TrmB C-terminal domain-like › TrmB C-terminal domain-like 0.63 57.0 4.82e-01 100.0% 72.5%
1884741 4.1.1.130 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_19 0.62 52.0 4.96e-01 100.0% 81.4%
4162968 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.62 53.0 4.63e-01 100.0% 75.9%
3396057 708.1.1.4 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FLYWCH 0.62 48.0 4.18e-01 96.0% 55.0%
3597660 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.62 52.0 3.09e-01 100.0% 28.0%
3390286 6.1.1.11 ↗ beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil › Fascin 0.55 45.0 3.50e-01 100.0% 96.8%
3385474 219.1.1.8 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 0.53 46.0 3.19e-01 100.0% 38.7%
4098704 4167.1.1.1 ↗ beta complex topology › Flagellar hook protein flgE D1 domain › Flagellar hook protein flgE D1 domain › Flagellar hook protein flgE D1 domain › LlgE_F_G_D1 0.52 39.0 2.91e-01 84.0% 38.6%
3249251 6.1.1.0 ↗ beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil 0.52 40.0 3.09e-01 94.0% 55.8%
4525683 4.11.1.3 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Phage_CI_C 0.52 39.0 3.15e-01 90.0% 86.4%
154175 6.1.1.11 ↗ beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil › Fascin 0.51 42.0 3.24e-01 100.0% 83.8%