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MT639646.1__QNJ55935.1__SEA_RASPUTIA_45__00045
Bact-VirMT639646.1__QNJ55935.1__SEA_RASPUTIA_45__00045
Identity
- Accession:
- MT639646 ↗
- Kingdom:
- phage
Quality
63.1
mean pLDDT
Taxonomy
TaxID: 2762419
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 291-367
Domain cluster:
representative
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3dktA02 | 3.30.2320.10 | Alpha Beta › 2-Layer Sandwich › hypothetical protein PF0899 fold › hypothetical protein PF0899 domain | 0.69 | 48.0 | 4.47e-01 | 97.4% | 58.9% |
| 1b8aA02 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.62 | 47.0 | 3.06e-01 | 81.8% | 23.1% |
| 7p8na01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.60 | 43.0 | 4.24e-01 | 93.5% | 71.1% |
| 6ogmD00 | 3.30.429.10 | Alpha Beta › 2-Layer Sandwich › Macrophage Migration Inhibitory Factor › Macrophage Migration Inhibitory Factor | 0.60 | 39.0 | 4.31e-01 | 85.7% | 85.2% |
| 3ej3C00 | 3.30.429.10 | Alpha Beta › 2-Layer Sandwich › Macrophage Migration Inhibitory Factor › Macrophage Migration Inhibitory Factor | 0.60 | 39.0 | 4.23e-01 | 85.7% | 81.2% |
| 4nq3A01 | 3.30.1330.170 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Cyanuric acid hydrolase/Barbiturase, RU A | 0.58 | 47.0 | 4.35e-01 | 100.0% | 69.4% |
| 1bkcE00 | 3.40.390.10 | Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › Collagenase (Catalytic Domain) | 0.58 | 48.0 | 3.48e-01 | 97.4% | 97.3% |
| 3laxA00 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.57 | 43.0 | 3.94e-01 | 100.0% | 60.4% |
| 4oo3A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.55 | 37.0 | 3.12e-01 | 92.2% | 37.2% |
| 5kc8A01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.55 | 49.0 | 3.44e-01 | 98.7% | 86.9% |
| 1p1jA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.55 | 47.0 | 4.17e-01 | 98.7% | 75.7% |
| 3m21F00 | 3.30.429.10 | Alpha Beta › 2-Layer Sandwich › Macrophage Migration Inhibitory Factor › Macrophage Migration Inhibitory Factor | 0.55 | 40.0 | 4.20e-01 | 84.4% | 89.6% |
| 1jdpB02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.55 | 47.0 | 3.46e-01 | 97.4% | 84.5% |
| 5mmiJ02 | 1.10.10.250 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Ribosomal protein L11/L12, C-terminal domain | 0.55 | 33.0 | 3.50e-01 | 74.0% | 66.7% |
| 3zf8A00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.53 | 45.0 | 3.15e-01 | 98.7% | 27.1% |
| 1d0nA02 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.53 | 35.0 | 3.18e-01 | 97.4% | 47.3% |
| 3i9v102 | 3.40.50.11540 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NADH-ubiquinone oxidoreductase 51kDa subunit | 0.53 | 44.0 | 3.47e-01 | 97.4% | 73.2% |
| 1e3hA01 | 3.30.230.70 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › GHMP Kinase, N-terminal domain | 0.52 | 36.0 | 2.62e-01 | 72.7% | 51.2% |
| 3dohA02 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.51 | 41.0 | 3.05e-01 | 94.8% | 85.0% |
ECOD (23)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3948092 | 4038.1.1.0 ↗ | alpha bundles › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein | 0.65 | 46.0 | 3.42e-01 | 100.0% | 27.6% |
| 4029867 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.62 | 47.0 | 4.46e-01 | 97.4% | 67.4% |
| 3640322 | 2484.1.1.205 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF27035 | 0.62 | 45.0 | 3.41e-01 | 76.6% | 81.6% |
| 3223567 | 2498.1.1.4 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Reprolysin | 0.60 | 51.0 | 3.64e-01 | 100.0% | 78.8% |
| 4626943 | 3068.2.1.1 ↗ | a+b complex topology › Flagellar protein FlgA N-terminal domain-like › RNase J C-terminal domain › RNase J C-terminal domain › RNase_J_C | 0.58 | 43.0 | 3.96e-01 | 79.2% | 90.0% |
| 4383906 | 2498.1.1.153 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › MICSWaP | 0.56 | 48.0 | 3.69e-01 | 98.7% | 99.0% |
| 3913336 | 2006.1.4.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N,XPG_I | 0.55 | 44.0 | 3.41e-01 | 90.9% | 64.3% |
| 3268825 | 224.1.1.0 ↗ | a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like | 0.55 | 39.0 | 3.31e-01 | 90.9% | 42.9% |
| 4950405 | 3003.1.1.0 ↗ | a+b complex topology › N-terminal subdomain in DNA replication initiator (cdc21/cdc54) › N-terminal subdomain in DNA replication initiator (cdc21/cdc54) › N-terminal subdomain in DNA replication initiator (cdc21/cdc54) | 0.54 | 39.0 | 3.83e-01 | 77.9% | 71.8% |
| 3478175 | 3003.1.1.6 ↗ | a+b complex topology › N-terminal subdomain in DNA replication initiator (cdc21/cdc54) › N-terminal subdomain in DNA replication initiator (cdc21/cdc54) › N-terminal subdomain in DNA replication initiator (cdc21/cdc54) › PF26063 | 0.54 | 39.0 | 3.62e-01 | 79.2% | 63.8% |
| 3577639 | 2006.1.4.19 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N | 0.54 | 46.0 | 3.50e-01 | 100.0% | 63.0% |
| 3520423 | 2004.1.1.10 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATP-synt_ab | 0.54 | 38.0 | 3.12e-01 | 77.9% | 40.6% |
| 4097489 | 301.7.1.8 ↗ | a+b three layers › Bacillus chorismate mutase-like › YjgF-like › YjgF-like › PF29624 | 0.53 | 43.0 | 3.72e-01 | 100.0% | 56.0% |
| 3686192 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.53 | 42.0 | 3.82e-01 | 93.5% | 62.4% |
| 3973643 | 301.3.1.0 ↗ | a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like | 0.53 | 42.0 | 3.79e-01 | 94.8% | 62.5% |
| 3182751 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.53 | 43.0 | 3.30e-01 | 97.4% | 57.7% |
| 4606906 | 2004.1.1.29 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD | 0.52 | 44.0 | 3.07e-01 | 94.8% | 67.9% |
| 4947580 | 301.6.1.0 ↗ | a+b three layers › Bacillus chorismate mutase-like › Tubulin C-terminal domain-like › Tubulin C-terminal domain-like | 0.52 | 45.0 | 3.52e-01 | 100.0% | 64.4% |
| 3479142 | 2007.1.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I | 0.52 | 43.0 | 3.33e-01 | 97.4% | 96.4% |
| 2447204 | 2006.1.4.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N,XPG_I | 0.51 | 38.0 | 3.72e-01 | 80.5% | 71.3% |
| 4116163 | 2011.1.1.2 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M14,Pepdidase_M14_N | 0.51 | 42.0 | 2.63e-01 | 97.4% | 42.4% |
| 3700300 | 2004.1.1.60 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SKI | 0.51 | 41.0 | 3.25e-01 | 96.1% | 96.8% |
| 3615392 | 2007.1.2.27 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_A-cyclase | 0.51 | 43.0 | 3.19e-01 | 97.4% | 48.8% |
D2
high
residues 859-1026
Domain cluster:
rep: MT310852.1__QJD49729.1__SEA_CLUBPENGUIN_5__00005__D26-178
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13563.13 best | 2_5_RNA_ligase2 | 34.1 | 4.00e-08 | 88.1% | 82.9% |
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2vfkA00 | 3.90.1140.10 | Alpha Beta › Alpha-Beta Complex › Cyclic Phosphodiesterase; Chain: A, › Cyclic phosphodiesterase | 0.75 | 69.0 | 6.42e-01 | 99.4% | 98.0% |
| 1iuhA00 | 3.90.1140.10 | Alpha Beta › Alpha-Beta Complex › Cyclic Phosphodiesterase; Chain: A, › Cyclic phosphodiesterase | 0.74 | 69.0 | 6.68e-01 | 98.2% | 98.4% |
| 2d4gA00 | 3.90.1140.10 | Alpha Beta › Alpha-Beta Complex › Cyclic Phosphodiesterase; Chain: A, › Cyclic phosphodiesterase | 0.73 | 67.0 | 6.78e-01 | 97.0% | 99.4% |
| 4qakA00 | 3.90.1140.10 | Alpha Beta › Alpha-Beta Complex › Cyclic Phosphodiesterase; Chain: A, › Cyclic phosphodiesterase | 0.70 | 64.0 | 6.43e-01 | 98.2% | 98.2% |
| 2it1A03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.59 | 24.0 | 3.70e-01 | 88.1% | 96.7% |
| 3fvqA03 | 2.40.50.470 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.58 | 20.0 | 3.25e-01 | 91.1% | 84.5% |
| 1wojA00 | 3.90.1740.10 | Alpha Beta › Alpha-Beta Complex › 2',3'-cyclic nucleotide 3'-phosphodiesterase fold › 2',3'-cyclic nucleotide 3'-phosphodiesterase superfamily | 0.58 | 50.0 | 4.64e-01 | 92.3% | 99.0% |
| 1v43A03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.56 | 24.0 | 3.55e-01 | 88.1% | 96.9% |
| 4l5tB02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.56 | 23.0 | 2.99e-01 | 90.5% | 64.8% |
| 2awnC03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.55 | 22.0 | 3.41e-01 | 86.3% | 100.0% |
| 1gutA00 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.54 | 23.0 | 3.39e-01 | 86.9% | 94.0% |
| 3h0gH00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.53 | 25.0 | 2.88e-01 | 71.4% | 56.5% |
| 3d31A03 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.52 | 24.0 | 3.39e-01 | 90.5% | 97.2% |
| 1fr3A00 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.52 | 22.0 | 3.19e-01 | 90.5% | 92.5% |
| 4l5rC02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.51 | 22.0 | 2.83e-01 | 90.5% | 67.4% |
| 2r41A00 | 3.10.450.150 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › enterococcus faecalis protein | 0.51 | 28.0 | 3.45e-01 | 85.1% | 84.5% |
| 3rn5A02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.51 | 21.0 | 2.79e-01 | 89.3% | 65.2% |
| 1b9mA03 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.50 | 23.0 | 3.36e-01 | 88.1% | 100.0% |
ECOD (40)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3251551 | 264.1.1.15 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › DUF1045 | 0.79 | 73.0 | 6.63e-01 | 97.6% | 95.8% |
| 3698720 | 264.1.1.7 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › AKAP7_NLS | 0.77 | 70.0 | 6.33e-01 | 97.0% | 87.9% |
| 3690734 | 264.1.1.9 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › 2_5_RNA_ligase2 | 0.76 | 69.0 | 7.04e-01 | 95.8% | 98.2% |
| 3290691 | 264.1.1.9 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › 2_5_RNA_ligase2 | 0.75 | 69.0 | 6.29e-01 | 97.0% | 85.0% |
| 2322578 | 264.1.1.6 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › HVSL | 0.75 | 69.0 | 6.67e-01 | 97.0% | 97.3% |
| 4453123 | 264.1.1.1 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › LigT_PEase | 0.75 | 69.0 | 6.77e-01 | 98.2% | 100.0% |
| 4951894 | 264.1.1.9 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › 2_5_RNA_ligase2 | 0.75 | 70.0 | 6.66e-01 | 100.0% | 90.8% |
| 3739681 | 264.1.1.6 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › HVSL | 0.75 | 69.0 | 6.45e-01 | 97.6% | 99.0% |
| 3730050 | 264.1.1.5 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › 2H-phosphodiest | 0.75 | 70.0 | 6.23e-01 | 100.0% | 92.5% |
| 5011802 | 264.1.1.9 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › 2_5_RNA_ligase2 | 0.75 | 70.0 | 6.51e-01 | 100.0% | 87.8% |
| 3894760 | 264.1.1.7 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › AKAP7_NLS | 0.74 | 68.0 | 6.43e-01 | 97.0% | 96.9% |
| 3233020 | 264.1.1.7 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › AKAP7_NLS | 0.74 | 68.0 | 6.54e-01 | 97.6% | 98.9% |
| 4079239 | 264.1.1.4 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › CPDase | 0.74 | 68.0 | 6.45e-01 | 96.4% | 99.0% |
| 1117634 | 264.1.1.8 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › AKAP7_NLS,AKAP7_RIRII_bdg | 0.74 | 68.0 | 6.14e-01 | 100.0% | 89.1% |
| 4982807 | 264.1.1.7 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › AKAP7_NLS | 0.74 | 67.0 | 6.52e-01 | 97.0% | 98.4% |
| 3788314 | 264.1.1.4 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › CPDase | 0.73 | 67.0 | 6.36e-01 | 96.4% | 99.0% |
| 4031839 | 264.1.1.9 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › 2_5_RNA_ligase2 | 0.73 | 67.0 | 6.70e-01 | 97.6% | 98.8% |
| 3990131 | 264.1.1.5 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › 2H-phosphodiest | 0.72 | 65.0 | 5.97e-01 | 95.8% | 93.3% |
| 3744563 | 264.1.1.4 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › CPDase | 0.71 | 65.0 | 6.33e-01 | 95.8% | 98.3% |
| 5051264 | 264.1.1.9 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › 2_5_RNA_ligase2 | 0.71 | 65.0 | 6.48e-01 | 97.6% | 99.4% |
| None | — | 0.71 | 62.0 | 6.27e-01 | 92.9% | 100.0% | |
| 3483252 | 264.1.1.0 ↗ | beta barrels › LigT-like › LigT-related › LigT-related | 0.71 | 51.0 | 5.55e-01 | 73.8% | 97.9% |
| 3731250 | 264.1.1.6 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › HVSL | 0.71 | 65.0 | 6.11e-01 | 97.6% | 97.5% |
| 4019568 | 264.1.1.9 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › 2_5_RNA_ligase2 | 0.71 | 65.0 | 6.21e-01 | 97.6% | 99.5% |
| 3553577 | 264.1.1.0 ↗ | beta barrels › LigT-like › LigT-related › LigT-related | 0.71 | 65.0 | 6.43e-01 | 97.6% | 98.3% |
| 3982264 | 264.1.1.1 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › LigT_PEase | 0.71 | 65.0 | 6.48e-01 | 98.2% | 97.7% |
| 1953031 | 264.1.1.9 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › 2_5_RNA_ligase2 | 0.71 | 65.0 | 6.45e-01 | 98.2% | 97.1% |
| 3495739 | 264.1.1.7 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › AKAP7_NLS | 0.70 | 52.0 | 5.58e-01 | 76.8% | 98.6% |
| 4957217 | 264.1.1.1 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › LigT_PEase | 0.68 | 62.0 | 6.09e-01 | 97.6% | 98.3% |
| 3548767 | 264.1.1.0 ↗ | beta barrels › LigT-like › LigT-related › LigT-related | 0.68 | 62.0 | 6.25e-01 | 100.0% | 97.6% |
| 3386124 | 2.4.1.0 ↗ | beta barrels › OB-fold › MOP-like › MOP-like | 0.59 | 22.0 | 3.15e-01 | 88.7% | 68.8% |
| 3497100 | 264.1.1.0 ↗ | beta barrels › LigT-like › LigT-related › LigT-related | 0.57 | 50.0 | 4.38e-01 | 92.9% | 98.0% |
| 3611297 | 264.1.1.0 ↗ | beta barrels › LigT-like › LigT-related › LigT-related | 0.57 | 46.0 | 4.95e-01 | 91.7% | 97.9% |
| 5078248 | 2.4.1.1 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE | 0.56 | 22.0 | 3.27e-01 | 87.5% | 82.9% |
| 2718212 | 2.4.1.1 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE | 0.54 | 22.0 | 3.13e-01 | 90.5% | 79.5% |
| 4057742 | 2.4.1.11 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_3 | 0.54 | 23.0 | 3.51e-01 | 86.9% | 100.0% |
| 3387994 | 2.4.1.0 ↗ | beta barrels › OB-fold › MOP-like › MOP-like | 0.53 | 26.0 | 3.54e-01 | 94.0% | 93.8% |
| 3259503 | 2.1.1.142 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › HROB | 0.52 | 24.0 | 2.75e-01 | 75.6% | 56.7% |
| 160497 | 2.4.1.1 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE | 0.52 | 22.0 | 3.07e-01 | 87.5% | 83.1% |
| 4990915 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.50 | 21.0 | 2.96e-01 | 88.7% | 82.9% |
D3
medium
residues 50-100_161-256
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1z1bA01 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.62 | 20.0 | 3.21e-01 | 81.0% | 73.7% |
| 2diqA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 25.0 | 3.03e-01 | 88.4% | 55.0% |
| 1flmA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.58 | 33.0 | 3.57e-01 | 90.5% | 65.6% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4937731 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.69 | 30.0 | 4.52e-01 | 87.1% | 100.0% |
| 4969566 | 4.1.1.301 ↗ | beta barrels › SH3 › SH3 › SH3 › MJ1316 | 0.65 | 35.0 | 4.49e-01 | 88.4% | 92.5% |
| 4982354 | 4.7.1.0 ↗ | beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 | 0.58 | 28.0 | 3.92e-01 | 85.0% | 100.0% |
| 4028908 | 375.14.2.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-like domain in leucyl-tRNA synthetase (LS1) › Rubredoxin-like domain in leucyl-tRNA synthetase (LS2) | 0.56 | 25.0 | 3.65e-01 | 91.8% | 100.0% |
| 682 | 4184.1.1.2 ↗ | beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › MFP2b | 0.51 | 33.0 | 3.88e-01 | 99.3% | 98.9% |
| 3622645 | 4184.1.1.2 ↗ | beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › MFP2b | 0.51 | 32.0 | 3.82e-01 | 98.0% | 97.9% |
| 5056229 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.51 | 40.0 | 3.43e-01 | 83.7% | 95.1% |