←Back to structures

MT647606.1__QOI69014.1__Mosig_00050__00050

Bact-Vir

MT647606.1__QOI69014.1__Mosig_00050__00050

Identity

Accession:
MT647606 ↗
Kingdom:
phage

Quality

69.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pantevenvirales› Kyanoviridae› Pelagibacter_phage_Mosig_EXVC030M

TaxID: 2759214

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 10-91_113-203
PDB
Domain cluster: rep: ALT_09252017_20_scaffold_29_prodigal-single.1__X__X__00352__D40-229
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF16724.12 best T4-gp15_tss 194.3 2.70e-57 100.0% 75.6%
D2 high residues 306-462
PDB
D3 medium residues 92-112_204-261
PDB
Domain cluster: representative
CATH (10)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3hrdC02 3.30.390.50 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain 0.69 41.0 3.65e-01 77.2% 41.6%
1y8cA02 2.20.25.110 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases 0.69 38.0 4.32e-01 82.3% 71.7%
3hxlA05 3.30.360.90 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › 0.66 35.0 3.76e-01 77.2% 59.4%
5karA01 3.60.21.10 Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases 0.58 49.0 3.14e-01 96.2% 84.9%
4owzA00 3.10.130.10 Alpha Beta › Roll › P-30 Protein › Ribonuclease A-like domain 0.57 39.0 3.36e-01 70.9% 74.6%
2e1qC05 3.30.390.50 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain 0.57 42.0 3.69e-01 86.1% 52.5%
4cvuA04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 39.0 3.48e-01 81.0% 77.6%
1rm6B02 3.30.390.50 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain 0.51 38.0 3.47e-01 79.7% 76.6%
7z7vC01 3.30.460.80 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › NADH:ubiquinone oxidoreductase Nqo5 subunit 0.51 32.0 2.79e-01 82.3% 40.2%
1orvA01 2.140.10.30 Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Dipeptidylpeptidase IV, N-terminal domain 0.50 41.0 2.63e-01 96.2% 45.3%
ECOD (9)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4000010 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 37.0 3.77e-01 87.3% 65.0%
3634542 4099.1.1.0 ↗ a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.57 46.0 3.57e-01 96.2% 40.6%
3266323 216.1.1.4 ↗ a+b two layers › UBC-like › UBC-like › UBC-like › RWD 0.57 39.0 3.39e-01 82.3% 46.7%
4962710 295.1.1.54 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › DUF6360 0.56 35.0 3.41e-01 84.8% 56.5%
4029709 216.1.1.0 ↗ a+b two layers › UBC-like › UBC-like › UBC-like 0.56 42.0 3.62e-01 81.0% 64.8%
3688408 230.1.1.0 ↗ a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like 0.53 40.0 3.44e-01 78.5% 80.0%
4156336 274.1.1.0 ↗ a+b two layers › Pili subunits › Pili subunits › Pili subunits 0.53 39.0 3.33e-01 78.5% 54.6%
3385337 9.3.1.4 ↗ beta barrels › Lipocalins/Streptavidin › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › DUF2921_N 0.53 43.0 3.30e-01 97.5% 37.9%
3815916 216.1.1.4 ↗ a+b two layers › UBC-like › UBC-like › UBC-like › RWD 0.53 41.0 3.51e-01 87.3% 98.6%
D4 medium residues 262-300_488-532
PDB
Domain cluster: rep: BML_09012016_9m_scaffold_2_prodigal-single.1__X__X__00049__D582-664