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MT647606.1__QOI69093.1__Mosig_00131__00129

Bact-Vir

MT647606.1__QOI69093.1__Mosig_00131__00129

Identity

Accession:
MT647606 ↗
Kingdom:
phage

Quality

65.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pantevenvirales› Kyanoviridae› Pelagibacter_phage_Mosig_EXVC030M

TaxID: 2759214

Cluster

View cluster (18 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 64-93_117-153_229-346
PDB
Domain cluster: rep: JSantini_GMIN_scaffold_8_prodigal-single.1__X__X__00039__D10-217
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF11091.15 best T4_tail_cap 22.9 6.00e-05 49.7% 10.4%
PF21440.4 aSelB_III 21.8 2.20e-04 37.3% 60.2%
CATH (15)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4divV01 2.40.30.200 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.65 47.0 5.35e-01 95.7% 98.5%
1bdfA01 3.30.1360.10 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit 0.61 28.0 3.61e-01 92.4% 72.6%
4noiA01 3.30.1360.10 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit 0.58 28.0 3.53e-01 91.9% 76.7%
3nrbB01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.58 24.0 3.42e-01 71.9% 81.9%
2m2jA00 3.30.1660.10 Alpha Beta › 2-Layer Sandwich › Dodecin subunit-like › Flavin-binding protein dodecin 0.57 24.0 3.73e-01 82.7% 100.0%
3mgjA00 3.30.70.2690 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › LOR/SDH bifunctional enzyme, conserved domain 0.57 26.0 3.47e-01 77.8% 80.2%
2zqeA00 3.30.1370.110 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.55 25.0 3.58e-01 89.2% 95.0%
6ofsA04 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.54 28.0 2.84e-01 71.4% 47.8%
3amiA02 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.54 30.0 3.01e-01 92.4% 49.2%
3ayhB01 3.30.1490.120 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › RNA polymerase Rpb7-like, N-terminal domain 0.54 25.0 3.61e-01 82.2% 100.0%
7c51A01 3.30.70.2970 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Protein of unknown function (DUF541), domain 2 0.53 27.0 3.37e-01 70.3% 78.4%
2l8yA00 3.30.110.70 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Hypothetical protein apc22750. Chain B 0.52 27.0 3.49e-01 76.8% 86.7%
5k9aA00 2.40.260.10 Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase 0.52 37.0 3.58e-01 88.1% 63.3%
4npjB02 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.52 26.0 2.92e-01 89.7% 59.2%
1je5A00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.51 33.0 3.36e-01 89.2% 64.6%
ECOD (16)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4995818 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.84 55.0 6.65e-01 92.4% 97.6%
3305434 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.73 31.0 4.37e-01 90.8% 81.1%
4988102 1.1.13.47 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Dit_like 0.69 41.0 5.26e-01 84.9% 98.2%
4257969 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.63 33.0 3.84e-01 99.5% 69.8%
4992631 304.18.1.1 ↗ a+b two layers › Alpha-beta plaits › Anticodon-binding domain of PheRS › Anticodon-binding domain of PheRS › FDX-ACB 0.61 27.0 3.70e-01 85.4% 82.2%
3802659 304.8.1.66 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › DUF7049 0.60 30.0 3.90e-01 76.2% 82.9%
3706456 304.55.2.8 ↗ a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Transposase IS200-like › FAZ1_cons 0.59 25.0 3.48e-01 70.3% 78.9%
3967437 1.1.13.5 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_GPD 0.59 34.0 4.26e-01 82.7% 94.5%
3966543 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.58 34.0 4.12e-01 82.7% 87.5%
3499602 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.58 24.0 3.25e-01 81.1% 70.0%
3224590 306.10.1.2 ↗ a+b two layers › Glucose permease domain IIB-like › H1 domain of KCTD12 › H1 domain of KCTD12 › H1_KCTD8_12_16 0.56 25.0 2.99e-01 89.7% 58.4%
3709835 881.1.1.0 ↗ a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.55 31.0 3.42e-01 85.4% 68.3%
4971865 304.25.1.1 ↗ a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer 0.55 28.0 3.41e-01 70.3% 75.0%
142220 309.1.1.4 ↗ a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase › Peptidase_M16_C 0.53 30.0 3.01e-01 92.4% 49.5%
3555669 304.126.1.1 ↗ a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C › V_ATPase_I 0.52 22.0 2.67e-01 71.4% 56.7%
4481559 304.25.1.1 ↗ a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer 0.52 28.0 3.27e-01 70.8% 73.1%
D2 medium residues 154-174_189-228
PDB