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MT647606.1__QOI69147.1__Mosig_00186__00183

Bact-Vir

MT647606.1__QOI69147.1__Mosig_00186__00183

Identity

Accession:
MT647606 ↗
Kingdom:
phage

Quality

88.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pantevenvirales› Kyanoviridae› Pelagibacter_phage_Mosig_EXVC030M

TaxID: 2759214

Cluster

View cluster (23 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-83_131-168
PDB
Domain cluster: representative
CATH (19)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3rnlA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.66 59.0 4.64e-01 97.5% 85.4%
1cjmA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.64 55.0 4.51e-01 93.4% 73.1%
2qu8A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.60 51.0 4.38e-01 92.6% 86.6%
1zd1B00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.59 52.0 4.21e-01 99.2% 75.1%
3v46A00 3.40.50.11990 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › RNA polymerase II accessory factor, Cdc73 C-terminal domain 0.57 47.0 4.35e-01 90.9% 92.5%
2q8pA01 3.40.50.1980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain 0.55 37.0 4.28e-01 83.5% 98.8%
3tixB03 3.40.50.11490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.55 44.0 4.17e-01 88.4% 98.7%
8ebtA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.54 43.0 3.78e-01 84.3% 76.0%
3mtqB00 3.40.50.510 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphotransferase system, mannose-type IIA component 0.54 43.0 4.13e-01 88.4% 74.5%
3tovA02 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.54 44.0 3.90e-01 90.9% 89.7%
1yc5A01 3.40.50.1220 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › TPP-binding domain 0.54 44.0 4.18e-01 91.7% 94.7%
3u31A01 3.40.50.1220 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › TPP-binding domain 0.53 45.0 4.07e-01 91.7% 84.1%
3fbgA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.53 42.0 3.94e-01 84.3% 85.0%
7q1bA01 3.40.800.20 Alpha Beta › 3-Layer(aba) Sandwich › Arginase; Chain A › Histone deacetylase domain 0.53 45.0 3.26e-01 95.9% 99.2%
2oap202 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 45.0 3.52e-01 96.7% 80.9%
2vt3B02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.52 40.0 3.97e-01 83.5% 85.6%
2rdmA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.51 42.0 4.23e-01 90.9% 92.7%
2zwiB02 3.40.50.11110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Sialyltransferase, C-terminal GT-B Rossman nucleotide-binding domain 0.51 39.0 3.67e-01 82.6% 89.7%
3dmyA02 3.40.50.261 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Succinyl-CoA synthetase domains 0.51 43.0 4.10e-01 91.7% 90.0%
ECOD (21)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3940080 2004.1.1.104 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Sulfotransfer_2 0.71 66.0 4.94e-01 100.0% 76.7%
3940079 2004.1.1.104 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Sulfotransfer_2 0.70 65.0 5.11e-01 100.0% 82.5%
3601075 7514.1.1.3 ↗ a/b three-layered sandwiches › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › NAD_binding_6 0.59 44.0 4.09e-01 78.5% 98.7%
5038258 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.59 49.0 4.53e-01 90.1% 96.8%
3867821 7512.1.1.1 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDPGT 0.59 48.0 3.71e-01 90.1% 94.8%
3997757 2004.1.1.124 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › CDC73_C 0.57 47.0 4.14e-01 90.1% 92.8%
5072352 7531.1.1.1 ↗ a/b three-layered sandwiches › Carbamate kinase-like › Carbamate kinase-like › Carbamate kinase-like › AA_kinase 0.57 46.0 3.80e-01 89.3% 92.2%
4812653 2488.1.1.1 ↗ a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › SpoU_methylase 0.56 47.0 4.19e-01 91.7% 84.6%
4009816 2003.1.1.68 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › XdhC_C 0.56 47.0 4.23e-01 90.9% 91.5%
4930962 7569.1.1.0 ↗ a/b three-layered sandwiches › Uracil-DNA glycosylase-like › Uracil-DNA glycosylase-like › Uracil-DNA glycosylase-like 0.53 46.0 4.34e-01 93.4% 79.2%
4999348 2004.1.1.16 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Arf 0.53 43.0 3.60e-01 88.4% 91.3%
4274052 247.1.1.2 ↗ a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B,RMMBL 0.53 42.0 3.32e-01 87.6% 96.5%
4064584 7591.1.1.1 ↗ a/b three-layered sandwiches › Tetraacyldisaccharide 4'-kinase C-terminal domain › Tetraacyldisaccharide 4'-kinase C-terminal domain › Tetraacyldisaccharide 4'-kinase C-terminal domain › LpxK 0.52 34.0 3.89e-01 79.3% 90.0%
4093458 7543.1.1.2 ↗ a/b three-layered sandwiches › Methylglyoxal synthase-like › Methylglyoxal synthase-like › Methylglyoxal synthase-like › MGS 0.52 44.0 4.20e-01 93.4% 83.4%
3261530 7579.1.1.3 ↗ a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Peptidase_S9 0.52 44.0 3.21e-01 93.4% 70.2%
3867449 7512.1.1.1 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDPGT 0.52 45.0 3.54e-01 95.9% 95.5%
3791076 2006.1.6.0 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like 0.52 42.0 3.59e-01 90.1% 84.8%
3257794 7515.1.1.0 ↗ a/b three-layered sandwiches › Alkaline phosphatase-like › Alkaline phosphatase-like › Alkaline phosphatase-like 0.52 43.0 3.38e-01 92.6% 98.9%
5018378 2007.15.1.0 ↗ a/b three-layered sandwiches › Flavodoxin-like › N-deoxyribosyltransferase › N-deoxyribosyltransferase 0.51 38.0 3.91e-01 80.2% 93.9%
4597169 2003.1.1.24 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Shikimate_DH 0.51 40.0 3.80e-01 86.8% 80.7%
4270287 2003.1.1.24 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Shikimate_DH 0.50 40.0 3.73e-01 84.3% 84.0%
D2 medium residues 84-130_169-205
PDB
Domain cluster: representative
CATH (10)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1hs7A00 1.20.58.70 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.60 41.0 3.92e-01 70.2% 80.4%
4g1tA02 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.58 38.0 4.34e-01 75.0% 93.4%
2gxaE01 1.10.10.510 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Zinc finger, large T-antigen D1 domain 0.58 33.0 3.49e-01 100.0% 60.3%
3vprA02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.58 41.0 3.49e-01 75.0% 66.9%
2uv8A07 6.10.140.1410 Special › Helix non-globular › Helix Hairpins › 0.56 30.0 3.04e-01 91.7% 50.6%
6hftA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.55 41.0 3.63e-01 81.0% 52.8%
5wvoC02 1.10.10.2230 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.54 38.0 3.79e-01 73.8% 97.7%
2ekcB00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.54 44.0 3.19e-01 91.7% 59.5%
1ikpA02 3.90.1350.10 Alpha Beta › Alpha-Beta Complex › Exotoxin A, middle domain › Exotoxin A, middle domain 0.54 37.0 3.02e-01 70.2% 57.0%
3ls9A02 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.52 44.0 3.01e-01 96.4% 49.7%
ECOD (8)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3429732 109.7.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Cytochrome c oxidase subunit E › Cytochrome c oxidase subunit E 0.57 46.0 4.50e-01 86.9% 83.3%
3270162 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.55 35.0 3.84e-01 70.2% 78.6%
3330039 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.52 36.0 3.59e-01 70.2% 87.1%
3496275 109.4.1.594 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Syndetin_C 0.52 42.0 3.21e-01 88.1% 51.5%
4028977 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.52 41.0 2.74e-01 88.1% 40.5%
4957898 191.1.1.63 ↗ alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › TetR_N 0.52 39.0 3.04e-01 82.1% 55.0%
3932779 109.27.1.1 ↗ alpha superhelices › Repetitive alpha hairpins › BACK domain › BACK domain › BACK 0.51 41.0 3.60e-01 91.7% 65.2%
3242442 109.4.1.1141 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DUF19 0.50 37.0 3.15e-01 81.0% 93.5%