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MT662115.1__QMP23908.1__X__00034

Bact-Vir

MT662115.1__QMP23908.1__X__00034

Identity

Accession:
MT662115 ↗
Kingdom:
phage

Quality

91.4 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-97
PDB
CATH (47)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2nwvA00 3.30.310.110 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › XisI-like 0.65 48.0 4.63e-01 80.0% 69.6%
2z6oA00 3.10.110.10 Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme 0.64 51.0 4.26e-01 86.3% 77.1%
1r7lA00 3.30.2120.10 Alpha Beta › 2-Layer Sandwich › Bacillus phage protein › Bacillus phage protein-like 0.63 40.0 3.94e-01 77.9% 59.2%
1ah5A03 3.30.160.40 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Porphobilinogen deaminase, C-terminal domain 0.62 47.0 4.96e-01 81.1% 94.2%
2nvmA00 3.30.310.110 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › XisI-like 0.61 45.0 4.46e-01 80.0% 73.1%
7xinA03 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.61 50.0 4.83e-01 90.5% 99.1%
3dzzA01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.61 52.0 4.56e-01 94.7% 73.9%
2ddmB00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.61 39.0 2.77e-01 90.5% 22.5%
5fgoA00 3.10.450.700 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.61 37.0 4.35e-01 70.5% 91.9%
3ecrB03 3.30.160.40 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Porphobilinogen deaminase, C-terminal domain 0.60 46.0 4.55e-01 82.1% 95.1%
2gfgA00 2.40.320.10 Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 0.60 41.0 3.29e-01 70.5% 38.2%
2nlvA00 3.30.310.110 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › XisI-like 0.60 45.0 4.34e-01 82.1% 69.6%
6fyqA01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.60 48.0 3.99e-01 89.5% 65.3%
3cqyB01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.59 43.0 3.40e-01 74.7% 42.9%
2knqA01 3.55.40.10 Alpha Beta › 3-Layer(bab) Sandwich › minor pseudopilin epsh fold › minor pseudopilin epsh domain 0.59 41.0 3.66e-01 70.5% 53.8%
3natA01 3.40.50.11250 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Protein of unknown function DUF3013 0.59 48.0 4.20e-01 89.5% 76.9%
1p6pA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.58 40.0 3.65e-01 70.5% 96.0%
2rqlA00 3.30.160.100 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Ribosome hibernation promotion factor-like 0.58 46.0 4.67e-01 90.5% 87.4%
1dbzA01 3.30.540.10 Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 0.58 41.0 3.38e-01 74.7% 63.0%
3k44B00 3.30.2450.30 Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › 0.58 39.0 3.50e-01 70.5% 86.4%
2fpnA01 3.30.2030.10 Alpha Beta › 2-Layer Sandwich › TBP-like › YwmB-like 0.57 41.0 3.69e-01 76.8% 65.7%
4zm3B01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.57 46.0 4.08e-01 89.5% 76.1%
2d4rA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.56 42.0 3.68e-01 78.9% 84.9%
4uoiC00 3.30.160.890 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Hepatitis C virus envelope glycoprotein E1, chain C 0.56 25.0 3.28e-01 76.8% 76.5%
1vyfA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.56 39.0 3.48e-01 71.6% 93.3%
1u08A01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.56 45.0 3.99e-01 88.4% 71.1%
3tqmA00 3.30.160.100 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Ribosome hibernation promotion factor-like 0.56 43.0 4.42e-01 84.2% 86.7%
1cbiA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.56 39.0 3.49e-01 72.6% 89.7%
2epjA01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.56 45.0 3.73e-01 89.5% 65.3%
3cpfA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.55 35.0 4.04e-01 73.7% 92.3%
2ltrA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.55 39.0 3.83e-01 73.7% 68.6%
4akrA02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.55 51.0 4.36e-01 100.0% 98.0%
6c1zA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.55 38.0 3.40e-01 71.6% 86.2%
1t4lB00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.55 44.0 4.54e-01 90.5% 96.7%
2g9gA00 2.60.120.1020 Mainly Beta › Sandwich › Jelly Rolls › PAW domain 0.54 39.0 3.12e-01 74.7% 80.4%
3apuB00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.54 42.0 3.58e-01 87.4% 89.0%
1whqA01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.54 37.0 4.10e-01 70.5% 100.0%
4wfvA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.54 42.0 3.67e-01 86.3% 97.4%
2ywqA00 3.30.160.100 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Ribosome hibernation promotion factor-like 0.54 40.0 4.14e-01 82.1% 86.4%
4oddA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.53 40.0 3.49e-01 81.1% 96.6%
1imuA00 3.30.160.100 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Ribosome hibernation promotion factor-like 0.53 44.0 4.26e-01 93.7% 82.2%
3e5dA00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.53 38.0 3.56e-01 84.2% 59.2%
1khiA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.52 35.0 3.88e-01 70.5% 89.3%
2bklA02 2.130.10.120 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain 0.51 35.0 2.46e-01 71.6% 31.4%
1ln1A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.51 41.0 3.23e-01 87.4% 93.1%
6bnzA02 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.51 40.0 3.61e-01 88.4% 87.9%
2nugB02 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.50 35.0 3.97e-01 73.7% 100.0%
ECOD (60)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3515884 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.77 46.0 4.23e-01 71.6% 46.7%
4015773 216.1.1.0 a+b two layers › UBC-like › UBC-like › UBC-like 0.65 47.0 4.70e-01 75.8% 100.0%
3971082 241.2.1.0 a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like 0.65 51.0 4.63e-01 86.3% 88.9%
6662 4276.1.1.1 a+b two layers › XisI-like › XisI-like › XisI-like › XisI 0.65 48.0 4.63e-01 80.0% 69.6%
4028791 252.2.1.1 a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › AP2 0.65 37.0 4.69e-01 74.7% 98.2%
2096018 330.17.1.1 a+b two layers › dsRBD-like › Anti-CRISPR protein AcrIIA4 › Anti-CRISPR protein AcrIIA4 › AcrIIA4 0.64 47.0 4.90e-01 76.8% 89.7%
4058654 330.4.1.1 a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.64 53.0 5.29e-01 90.5% 97.0%
4971897 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.64 32.0 3.22e-01 80.0% 48.4%
4965501 330.4.1.1 a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.64 48.0 4.98e-01 81.1% 91.1%
3510695 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.62 44.0 4.74e-01 81.1% 88.7%
4609498 330.4.1.1 a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.61 47.0 5.07e-01 82.1% 100.0%
168173 4276.1.1.1 a+b two layers › XisI-like › XisI-like › XisI-like › XisI 0.61 45.0 4.39e-01 82.1% 68.8%
3224134 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.61 38.0 3.29e-01 81.1% 41.4%
6661 4276.1.1.1 a+b two layers › XisI-like › XisI-like › XisI-like › XisI 0.61 45.0 4.46e-01 80.0% 73.1%
3809302 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.60 43.0 4.49e-01 73.7% 88.2%
3619264 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.60 50.0 5.17e-01 95.8% 96.7%
3520951 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.60 43.0 4.40e-01 73.7% 83.3%
4336488 330.4.1.1 a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.60 42.0 4.71e-01 74.7% 97.1%
4026008 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.60 48.0 5.07e-01 91.6% 98.8%
3436093 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.60 44.0 4.80e-01 77.9% 98.7%
4026006 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.60 43.0 4.61e-01 75.8% 96.2%
3655368 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.60 44.0 4.78e-01 77.9% 98.7%
4043415 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.59 47.0 3.04e-01 86.3% 21.7%
3959503 3016.1.1.2 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Aminotran_3 0.59 49.0 4.44e-01 90.5% 84.4%
3780194 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.59 46.0 3.49e-01 86.3% 40.8%
4558929 330.4.1.1 a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.59 44.0 4.74e-01 80.0% 95.0%
396482 3147.1.1.1 a+b two layers › Uncharacterized protein EF_1977 › Uncharacterized protein EF_1977 › Uncharacterized protein EF_1977 › DUF3013 0.58 50.0 4.44e-01 95.8% 74.3%
3789856 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.58 44.0 4.17e-01 81.1% 74.8%
3670595 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.58 41.0 4.19e-01 74.7% 77.9%
3420092 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.58 42.0 4.54e-01 76.8% 95.0%
3520584 3147.1.1.1 a+b two layers › Uncharacterized protein EF_1977 › Uncharacterized protein EF_1977 › Uncharacterized protein EF_1977 › DUF3013 0.58 47.0 4.31e-01 87.4% 76.0%
3688914 283.1.1.4 a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › Creatinase/aminopeptidase › Creatinase/aminopeptidase › ThrE 0.58 50.0 4.39e-01 93.7% 85.7%
3894031 330.1.1.6 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Staufen_C 0.58 40.0 4.25e-01 74.7% 82.4%
3519032 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.58 45.0 4.45e-01 83.2% 89.0%
3802643 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.57 45.0 4.59e-01 86.3% 94.7%
3627771 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.57 44.0 4.61e-01 85.3% 92.9%
3515207 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.57 40.0 4.12e-01 73.7% 84.4%
3329783 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.56 43.0 4.32e-01 81.1% 82.1%
3741268 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.56 41.0 3.32e-01 75.8% 75.4%
4968392 330.2.1.0 a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) 0.56 47.0 4.66e-01 91.6% 90.0%
3700289 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.56 42.0 3.86e-01 81.1% 61.5%
2320506 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.56 43.0 3.81e-01 84.2% 97.2%
3968678 7503.1.1.0 a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain 0.56 40.0 3.56e-01 75.8% 75.0%
5024203 330.10.1.0 a+b two layers › dsRBD-like › Heterocyclase TruD C-terminal domain › Heterocyclase TruD C-terminal domain 0.55 42.0 4.29e-01 89.5% 84.4%
3503204 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.55 40.0 4.09e-01 77.9% 77.9%
3234330 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.55 39.0 3.77e-01 77.9% 64.5%
4359254 330.4.1.1 a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.55 38.0 4.19e-01 71.6% 90.7%
3702442 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.54 43.0 4.33e-01 88.4% 95.0%
5061259 330.2.1.1 a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) › Ribosomal_S30AE 0.54 45.0 4.46e-01 90.5% 89.0%
3435911 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.54 42.0 4.04e-01 85.3% 100.0%
3929563 5.1.4.14 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Peptidase_S9_N 0.54 37.0 2.57e-01 72.6% 72.6%
5037621 330.2.1.0 a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) 0.53 40.0 4.09e-01 83.2% 84.2%
5810 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.52 37.0 3.75e-01 75.8% 75.8%
4040354 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.52 37.0 4.06e-01 74.7% 98.7%
4304505 330.6.1.1 a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.52 44.0 4.00e-01 92.6% 86.9%
3494256 2003.1.1.51 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › DFP 0.52 40.0 2.91e-01 85.3% 78.1%
3709800 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.51 38.0 3.81e-01 78.9% 82.1%
4081797 3860.1.1.158 alpha bundles › Myosin VI lever arm › Myosin VI lever arm › Myosin VI lever arm › ThrE 0.51 41.0 3.61e-01 88.4% 79.3%
3616263 319.1.1.1 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.51 38.0 3.73e-01 84.2% 73.0%
3801624 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.51 38.0 3.79e-01 81.1% 77.0%