←Back to structures
MT664721.1__QMP81471.1__X__00014
Bact-VirMT664721.1__QMP81471.1__X__00014
Identity
- Accession:
- MT664721 ↗
- Kingdom:
- phage
Quality
89.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-67
Domain cluster:
rep: KY000079.2__QBZ67147.1__AM24_141__00140__D3-60
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1qoyA00 | 1.20.1170.10 | Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › | 0.70 | 59.0 | 3.88e-01 | 95.5% | 78.9% |
| 4akgA02 | 1.20.140.100 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Dynein motor heavy chain, linker domain, N-terminal subdomain | 0.64 | 55.0 | 4.07e-01 | 94.0% | 50.0% |
| 7zqiA01 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.63 | 55.0 | 4.03e-01 | 95.5% | 44.9% |
| 3hwcA01 | 1.10.3140.10 | Mainly Alpha › Orthogonal Bundle › 4-hydroxybutyryl-coa dehydratase, domain 1 › 4-hydroxybutyryl-coa dehydratase, domain 1 | 0.62 | 46.0 | 3.59e-01 | 79.1% | 38.1% |
| 1tvzA02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.62 | 41.0 | 3.16e-01 | 86.6% | 30.6% |
| 6liuC02 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.61 | 45.0 | 3.80e-01 | 80.6% | 46.6% |
| 3hh2D04 | 3.30.60.30 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.59 | 23.0 | 2.32e-01 | 80.6% | 30.0% |
| 4d8pB01 | 3.10.320.10 | Alpha Beta › Roll › Class II Histocompatibility Antigen, M Beta Chain; Chain B, domain 1 › Class II Histocompatibility Antigen, M Beta Chain; Chain B, domain 1 | 0.58 | 45.0 | 3.99e-01 | 86.6% | 96.1% |
| 1f02T00 | 4.10.820.10 | Few Secondary Structures › Irregular › Translocated Intimin Receptor; Chain T › Translocated intimin receptor, central domain | 0.58 | 43.0 | 4.36e-01 | 100.0% | 80.3% |
| 6opmD01 | 1.20.120.920 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CRISPR-associated endonuclease Cas1, C-terminal domain | 0.57 | 48.0 | 3.27e-01 | 91.0% | 86.6% |
| 1k8iA01 | 3.10.320.10 | Alpha Beta › Roll › Class II Histocompatibility Antigen, M Beta Chain; Chain B, domain 1 › Class II Histocompatibility Antigen, M Beta Chain; Chain B, domain 1 | 0.56 | 44.0 | 4.25e-01 | 88.1% | 85.7% |
| 2rdpA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 43.0 | 3.50e-01 | 88.1% | 73.6% |
| 2qr4A02 | 1.10.287.830 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › putative peptidase helix hairpin domain like | 0.54 | 35.0 | 3.95e-01 | 79.1% | 97.9% |
| 2wnsA00 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.54 | 45.0 | 3.34e-01 | 100.0% | 55.8% |
| 1zodA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.52 | 38.0 | 3.07e-01 | 79.1% | 37.6% |
| 8d3mA02 | 1.20.120.920 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CRISPR-associated endonuclease Cas1, C-terminal domain | 0.52 | 43.0 | 2.94e-01 | 91.0% | 90.4% |
| 3u4kA00 | 2.60.40.3310 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 33.0 | 2.54e-01 | 85.1% | 27.6% |
ECOD (42)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3202208 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.78 | 50.0 | 3.77e-01 | 73.1% | 29.3% |
| 3712415 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.76 | 53.0 | 3.71e-01 | 71.6% | 82.1% |
| 3574714 | 109.26.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › Nuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains › Nuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains › Nucleoporin_C | 0.75 | 53.0 | 3.70e-01 | 73.1% | 65.8% |
| 3775826 | 4016.1.1.0 ↗ | alpha bundles › alpha-helical domain in type II DNA topoisomerase › alpha-helical domain in type II DNA topoisomerase › alpha-helical domain in type II DNA topoisomerase | 0.71 | 55.0 | 4.18e-01 | 98.5% | 37.9% |
| 3976270 | 601.27.1.2 ↗ | alpha bundles › Four-helical up-and-down bundle › MW0975(SA0943)-like › MW0975(SA0943)-like › DUF3053 | 0.69 | 62.0 | 4.61e-01 | 100.0% | 86.1% |
| 3358614 | 5054.1.1.2 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans | 0.68 | 60.0 | 4.05e-01 | 100.0% | 39.6% |
| 3498627 | 7015.1.1.1 ↗ | alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › DHHC | 0.67 | 58.0 | 3.85e-01 | 95.5% | 44.7% |
| 3717906 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.66 | 53.0 | 3.72e-01 | 88.1% | 77.2% |
| 4251053 | 4106.1.1.1 ↗ | few secondary structure elements › Zinc hairpin stack › Zinc hairpin stack › Zinc hairpin stack › DHHC | 0.66 | 57.0 | 3.77e-01 | 94.0% | 38.0% |
| 3717247 | 4106.1.1.1 ↗ | few secondary structure elements › Zinc hairpin stack › Zinc hairpin stack › Zinc hairpin stack › DHHC | 0.65 | 56.0 | 3.86e-01 | 94.0% | 39.5% |
| 3271984 | 7015.1.1.0 ↗ | alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain | 0.65 | 53.0 | 4.15e-01 | 89.6% | 89.0% |
| 5024287 | 103.5.1.11 ↗ | alpha arrays › RuvA-C › post-HMGL domain-like › post-HMGL domain-like › DUF2067 | 0.65 | 45.0 | 4.36e-01 | 89.6% | 64.0% |
| 4965179 | 5040.1.1.0 ↗ | extended segments › Cytochrome c oxidase subunit II-like, transmembrane region › Cytochrome c oxidase subunit II-like, transmembrane region › Cytochrome c oxidase subunit II-like, transmembrane region | 0.64 | 43.0 | 4.11e-01 | 73.1% | 61.3% |
| 3597508 | 101.1.17.0 ↗ | alpha arrays › HTH › HTH › FF domain | 0.64 | 46.0 | 4.30e-01 | 100.0% | 62.5% |
| 3690781 | 304.48.1.11 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RNA_pol | 0.63 | 52.0 | 4.69e-01 | 100.0% | 66.3% |
| 3787064 | 7534.1.1.0 ↗ | a/b three-layered sandwiches › Undecaprenyl diphosphate synthase › Undecaprenyl diphosphate synthase › Undecaprenyl diphosphate synthase | 0.62 | 53.0 | 3.41e-01 | 95.5% | 20.3% |
| 3614292 | 7015.1.1.0 ↗ | alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain | 0.62 | 54.0 | 4.03e-01 | 97.0% | 43.5% |
| 3572850 | 2004.1.1.49 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase | 0.62 | 47.0 | 3.04e-01 | 83.6% | 25.3% |
| 3731212 | 192.24.1.0 ↗ | alpha bundles › Long alpha-hairpin › RPC62 helical hairpin domain › RPC62 helical hairpin domain | 0.62 | 56.0 | 5.20e-01 | 100.0% | 81.2% |
| 3538512 | 3892.1.1.0 ↗ | alpha bundles › Transhydrogeanse domain II › Transhydrogeanse domain II › Transhydrogeanse domain II | 0.61 | 54.0 | 4.04e-01 | 97.0% | 48.1% |
| 4025072 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.60 | 54.0 | 4.41e-01 | 95.5% | 56.5% |
| 4120498 | 4015.1.1.1 ↗ | alpha complex topology › alpha-helical domain in sec1/munc18-like (SM) proteins › alpha-helical domain in sec1/munc18-like (SM) proteins › alpha-helical domain in sec1/munc18-like (SM) proteins › Sec1 | 0.60 | 54.0 | 3.74e-01 | 98.5% | 38.6% |
| 5040756 | 3843.1.1.0 ↗ | alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K | 0.60 | 49.0 | 4.35e-01 | 88.1% | 100.0% |
| 3903618 | 219.1.1.54 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C98 | 0.60 | 44.0 | 2.92e-01 | 82.1% | 18.3% |
| 3498520 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.60 | 50.0 | 3.18e-01 | 92.5% | 77.6% |
| 3238653 | 5001.1.1.106 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Str | 0.59 | 55.0 | 3.44e-01 | 100.0% | 57.8% |
| 3201554 | 150.1.1.98 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › Vwaint | 0.59 | 44.0 | 3.56e-01 | 89.6% | 43.3% |
| 3245774 | 7525.1.1.2 ↗ | a/b three-layered sandwiches › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like › His_Phos_2 | 0.59 | 49.0 | 3.01e-01 | 91.0% | 31.5% |
| 3175629 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.59 | 47.0 | 2.67e-01 | 86.6% | 11.8% |
| 3788346 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.57 | 50.0 | 2.95e-01 | 100.0% | 24.8% |
| 3886813 | 233.1.1.0 ↗ | a+b two layers › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC antigen-recognition domain | 0.56 | 48.0 | 4.47e-01 | 94.0% | 91.8% |
| 4000569 | 135.1.1.1 ↗ | alpha arrays › Transducin (alpha subunit), insertion domain › Transducin (alpha subunit), insertion domain › Transducin (alpha subunit), insertion domain › G-alpha | 0.56 | 45.0 | 3.58e-01 | 88.1% | 62.9% |
| 3981752 | 829.1.1.1 ↗ | a+b duplicates or obligate multimers › NinB › NinB › NinB › NinB | 0.54 | 41.0 | 3.29e-01 | 80.6% | 52.3% |
| 5075731 | 3435.1.1.0 ↗ | a+b two layers › Recombination-associated protein rdgC › Recombination-associated protein rdgC › Recombination-associated protein rdgC | 0.54 | 36.0 | 3.22e-01 | 70.1% | 93.3% |
| 3879122 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.54 | 40.0 | 3.30e-01 | 82.1% | 85.4% |
| 1948726 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.53 | 45.0 | 2.93e-01 | 91.0% | 43.1% |
| 164037 | 4340.1.1.1 ↗ | a+b complex topology › TFB5-related › TFB5-related › TFB5-related › Tfb5 | 0.53 | 35.0 | 3.44e-01 | 82.1% | 60.8% |
| 3592030 | 304.102.1.0 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase | 0.53 | 45.0 | 3.04e-01 | 100.0% | 61.0% |
| 5064344 | 7584.1.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › AMP-binding | 0.52 | 44.0 | 3.47e-01 | 98.5% | 85.8% |
| 3532358 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.51 | 40.0 | 2.54e-01 | 86.6% | 21.8% |
| 3586120 | 109.4.1.1815 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF30838 | 0.51 | 46.0 | 2.65e-01 | 98.5% | 11.3% |
| 3286670 | 2002.1.1.16 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Bac_luciferase | 0.51 | 41.0 | 2.68e-01 | 88.1% | 23.1% |
D2
medium
residues 69-109
Domain cluster:
representative
CATH (48)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ybyA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.79 | 52.0 | 4.52e-01 | 82.9% | 43.8% |
| 3a5zD02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.75 | 50.0 | 4.33e-01 | 82.9% | 43.8% |
| 1twfI01 | 2.20.25.10 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.75 | 59.0 | 5.73e-01 | 90.2% | 82.6% |
| 3cngA01 | 2.20.70.10 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › | 0.70 | 53.0 | 5.61e-01 | 90.2% | 100.0% |
| 1bkbA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.66 | 44.0 | 3.82e-01 | 82.9% | 43.1% |
| 6bogA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 50.0 | 4.75e-01 | 97.6% | 71.2% |
| 3lzwA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.64 | 55.0 | 3.97e-01 | 100.0% | 66.4% |
| 4c5eC02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 50.0 | 3.97e-01 | 97.6% | 40.6% |
| 1sr4A00 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.63 | 49.0 | 3.45e-01 | 97.6% | 50.3% |
| 2it1A03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.62 | 46.0 | 4.16e-01 | 85.4% | 62.3% |
| 1xqaA01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.61 | 47.0 | 3.46e-01 | 90.2% | 31.8% |
| 1b7tA02 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.60 | 47.0 | 4.45e-01 | 97.6% | 71.2% |
| 1u0lA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.60 | 40.0 | 3.61e-01 | 82.9% | 43.8% |
| 2r41A00 | 3.10.450.150 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › enterococcus faecalis protein | 0.60 | 49.0 | 3.81e-01 | 100.0% | 61.2% |
| 2eifA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.60 | 41.0 | 3.78e-01 | 82.9% | 50.8% |
| 1yzyA02 | 3.40.980.20 | Alpha Beta › 3-Layer(aba) Sandwich › Molybdenum Cofactor Biosythetic Enzyme; Chain A › Four-carbon acid sugar kinase, nucleotide binding domain | 0.59 | 43.0 | 2.96e-01 | 85.4% | 20.8% |
| 4gp3A03 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.59 | 47.0 | 3.56e-01 | 100.0% | 59.8% |
| 2qkdA01 | 2.20.25.420 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ZPR1, zinc finger domain | 0.59 | 47.0 | 4.59e-01 | 97.6% | 93.8% |
| 5i4eA01 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.58 | 45.0 | 4.41e-01 | 97.6% | 80.4% |
| 2ckkA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 45.0 | 4.28e-01 | 95.1% | 79.2% |
| 4b9wA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 46.0 | 4.30e-01 | 97.6% | 71.4% |
| 1khiA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 45.0 | 3.91e-01 | 97.6% | 61.3% |
| 3ajvC02 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.57 | 39.0 | 3.24e-01 | 90.2% | 35.2% |
| 2diqA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 46.0 | 3.60e-01 | 97.6% | 40.0% |
| 2v1qA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.57 | 45.0 | 4.13e-01 | 97.6% | 81.7% |
| 7cfdA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 45.0 | 3.84e-01 | 97.6% | 52.1% |
| 3o4hA01 | 2.130.10.150 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Peptidase/esterase 'gauge' domain | 0.56 | 45.0 | 2.79e-01 | 100.0% | 26.7% |
| 2ix2A01 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.56 | 43.0 | 2.85e-01 | 95.1% | 45.2% |
| 2cudA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.56 | 44.0 | 3.78e-01 | 97.6% | 59.5% |
| 3cpfA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 47.0 | 4.12e-01 | 100.0% | 80.0% |
| 1yn8A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.56 | 44.0 | 4.10e-01 | 97.6% | 83.1% |
| 4uoiC00 | 3.30.160.890 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Hepatitis C virus envelope glycoprotein E1, chain C | 0.55 | 39.0 | 3.79e-01 | 82.9% | 76.5% |
| 4m4zA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.55 | 43.0 | 4.24e-01 | 97.6% | 87.2% |
| 3ntkA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 44.0 | 3.69e-01 | 97.6% | 60.0% |
| 1x6gA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.55 | 42.0 | 3.63e-01 | 97.6% | 60.5% |
| 3u12A00 | 2.30.29.180 | Mainly Beta › Roll › PH-domain like › Ubiquitin carboxyl-terminal hydrolase 26/29/37, pleckstrin homology-like domain | 0.54 | 44.0 | 3.48e-01 | 100.0% | 43.3% |
| 1lckA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.53 | 41.0 | 3.85e-01 | 97.6% | 79.7% |
| 1nnwB00 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.53 | 42.0 | 2.70e-01 | 97.6% | 82.1% |
| 2eqkA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 41.0 | 3.62e-01 | 97.6% | 54.8% |
| 4tm3A00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.53 | 42.0 | 2.47e-01 | 100.0% | 31.6% |
| 2x3fA02 | 3.30.1300.10 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › Pantoate-beta-alanine ligase, C-terminal domain | 0.52 | 37.0 | 3.13e-01 | 92.7% | 99.0% |
| 1maeL00 | 2.60.30.10 | Mainly Beta › Sandwich › Electron Transport Ethylamine Dehydrogenase › Methylamine/Aralkylamine dehydrogenase light chain | 0.52 | 36.0 | 2.79e-01 | 80.5% | 66.1% |
| 2fpeA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.51 | 39.0 | 3.64e-01 | 97.6% | 77.4% |
| 1zuyA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.51 | 39.0 | 3.66e-01 | 97.6% | 84.5% |
| 6my0A02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 38.0 | 3.54e-01 | 97.6% | 66.2% |
| 4o5vA03 | 2.30.30.90 | Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) | 0.51 | 41.0 | 3.52e-01 | 100.0% | 60.5% |
| 6vlfA03 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.50 | 38.0 | 3.58e-01 | 97.6% | 82.8% |
| 1zuuA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.50 | 38.0 | 3.68e-01 | 100.0% | 91.1% |
ECOD (77)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3580045 | 375.1.1.217 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › PF26040 | 0.82 | 62.0 | 6.59e-01 | 82.9% | 100.0% |
| 3623599 | 377.1.1.83 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › PF26040 | 0.81 | 60.0 | 6.39e-01 | 80.5% | 100.0% |
| 3247046 | 377.1.1.83 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › PF26040 | 0.80 | 66.0 | 6.72e-01 | 95.1% | 92.5% |
| 4963768 | 375.1.1.354 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › PF28086 | 0.80 | 63.0 | 6.69e-01 | 92.7% | 100.0% |
| 3670700 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.78 | 61.0 | 6.16e-01 | 90.2% | 90.0% |
| 4946886 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.77 | 67.0 | 6.30e-01 | 97.6% | 82.0% |
| 3935170 | 375.1.1.19 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RNA_POL_M_15KD | 0.77 | 61.0 | 5.94e-01 | 87.8% | 82.2% |
| 4927636 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.76 | 64.0 | 6.49e-01 | 97.6% | 97.5% |
| 3189994 | 375.1.1.19 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RNA_POL_M_15KD | 0.76 | 61.0 | 4.76e-01 | 90.2% | 42.2% |
| 3392762 | 377.1.1.83 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › PF26040 | 0.76 | 56.0 | 5.93e-01 | 80.5% | 97.1% |
| 3593875 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.76 | 61.0 | 5.58e-01 | 90.2% | 69.1% |
| 3383283 | 2.1.1.10 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP | 0.76 | 52.0 | 4.44e-01 | 82.9% | 44.6% |
| None | — | 0.76 | 61.0 | 3.64e-01 | 90.2% | 12.1% | |
| 2816341 | 375.1.1.189 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › EcdD_BsdD_detox | 0.75 | 56.0 | 4.94e-01 | 82.9% | 60.3% |
| 3208203 | 375.1.1.19 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RNA_POL_M_15KD | 0.75 | 59.0 | 5.37e-01 | 87.8% | 67.3% |
| 3505640 | 375.1.1.19 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RNA_POL_M_15KD | 0.75 | 60.0 | 5.31e-01 | 90.2% | 63.3% |
| 3258369 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.75 | 60.0 | 6.17e-01 | 97.6% | 100.0% |
| 5030311 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.75 | 62.0 | 5.69e-01 | 95.1% | 74.5% |
| 8012 | 375.1.1.19 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RNA_POL_M_15KD | 0.75 | 59.0 | 5.62e-01 | 90.2% | 77.6% |
| 4438701 | 375.1.1.272 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › PF26372 | 0.74 | 55.0 | 5.29e-01 | 82.9% | 69.4% |
| 4028185 | 375.1.1.19 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RNA_POL_M_15KD | 0.74 | 58.0 | 5.55e-01 | 90.2% | 78.0% |
| 3702861 | 375.1.1.19 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RNA_POL_M_15KD | 0.74 | 59.0 | 5.44e-01 | 90.2% | 69.1% |
| 3383223 | 375.1.1.53 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Nudix_N_2 | 0.74 | 58.0 | 5.32e-01 | 87.8% | 67.3% |
| 3819668 | 375.8.1.1 ↗ | few secondary structure elements › Rubredoxin-like › Zinc-binding domain of translation initiation factor 2 beta › Zinc-binding domain of translation initiation factor 2 beta › eIF-5_eIF-2B | 0.74 | 56.0 | 5.55e-01 | 85.4% | 79.5% |
| 3500033 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.73 | 58.0 | 5.52e-01 | 90.2% | 76.0% |
| 4289796 | 375.1.1.60 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › PriA_CRR | 0.73 | 62.0 | 5.37e-01 | 97.6% | 72.3% |
| 4344077 | 375.8.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Zinc-binding domain of translation initiation factor 2 beta › Zinc-binding domain of translation initiation factor 2 beta | 0.73 | 54.0 | 5.52e-01 | 97.6% | 87.5% |
| 3482645 | 375.8.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Zinc-binding domain of translation initiation factor 2 beta › Zinc-binding domain of translation initiation factor 2 beta | 0.72 | 55.0 | 5.77e-01 | 85.4% | 100.0% |
| 3612107 | 375.8.1.1 ↗ | few secondary structure elements › Rubredoxin-like › Zinc-binding domain of translation initiation factor 2 beta › Zinc-binding domain of translation initiation factor 2 beta › eIF-5_eIF-2B | 0.72 | 58.0 | 5.22e-01 | 92.7% | 65.0% |
| 5078768 | 101.1.2.819 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF27231 | 0.71 | 61.0 | 4.12e-01 | 100.0% | 90.0% |
| 5031337 | 375.8.1.1 ↗ | few secondary structure elements › Rubredoxin-like › Zinc-binding domain of translation initiation factor 2 beta › Zinc-binding domain of translation initiation factor 2 beta › eIF-5_eIF-2B | 0.70 | 55.0 | 5.57e-01 | 90.2% | 94.9% |
| 5017134 | 208.1.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes › Hexapep | 0.70 | 55.0 | 3.59e-01 | 92.7% | 23.1% |
| 4948719 | 101.1.2.28 ↗ | alpha arrays › HTH › HTH › winged helix domain › eIF-5_eIF-2B | 0.69 | 58.0 | 4.47e-01 | 100.0% | 83.0% |
| 5054531 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.68 | 58.0 | 4.45e-01 | 100.0% | 68.0% |
| 5044393 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.68 | 57.0 | 5.08e-01 | 97.6% | 75.0% |
| 3547695 | 3470.1.1.0 ↗ | extended segments › Glycophorin-A transmembrane domain › Glycophorin-A transmembrane domain › Glycophorin-A transmembrane domain | 0.67 | 44.0 | 4.79e-01 | 78.0% | 93.3% |
| 4202852 | 375.1.1.26 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 | 0.67 | 55.0 | 4.20e-01 | 97.6% | 74.3% |
| 4944397 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.67 | 51.0 | 4.88e-01 | 92.7% | 70.0% |
| 3617175 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 51.0 | 4.75e-01 | 97.6% | 65.5% |
| 4022266 | 3755.4.1.0 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain | 0.67 | 46.0 | 3.04e-01 | 75.6% | 30.1% |
| 3620138 | 3246.1.1.4 ↗ | few secondary structure elements › Disulfide-rich domain in A Disintegrin And Metalloprotease (ADAM) domain-containing proteins › Disulfide-rich domain in A Disintegrin And Metalloprotease (ADAM) domain-containing proteins › Disulfide-rich domain in A Disintegrin And Metalloprotease (ADAM) domain-containing proteins › ADAMTS_CR_3 | 0.66 | 53.0 | 4.16e-01 | 97.6% | 48.0% |
| 4998404 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.66 | 48.0 | 4.29e-01 | 80.5% | 91.7% |
| 3356611 | 64.1.1.0 ↗ | beta meanders › WW domain-like › WW domain › WW domain | 0.66 | 47.0 | 4.32e-01 | 100.0% | 58.2% |
| 3580264 | 366.1.1.8 ↗ | few secondary structure elements › Blood coagulation inhibitor (disintegrin) › Blood coagulation inhibitor (disintegrin) › Blood coagulation inhibitor (disintegrin) › ADAMTS_CR_3 | 0.65 | 53.0 | 4.15e-01 | 97.6% | 52.0% |
| 4986625 | 213.1.1.19 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › FR47 | 0.65 | 47.0 | 3.21e-01 | 82.9% | 21.3% |
| 4090610 | 4071.1.1.1 ↗ | beta barrels › BH3618-like › BH3618-like › BH3618-like › FliW | 0.64 | 51.0 | 3.78e-01 | 97.6% | 33.6% |
| 4664947 | 4071.1.1.0 ↗ | beta barrels › BH3618-like › BH3618-like › BH3618-like | 0.64 | 51.0 | 3.79e-01 | 97.6% | 33.6% |
| 4962895 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.64 | 53.0 | 4.89e-01 | 97.6% | 78.2% |
| 4933213 | 375.1.1.31 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Elf1 | 0.64 | 51.0 | 4.41e-01 | 100.0% | 55.7% |
| 4951495 | 375.1.1.299 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › CPxCG_zf | 0.64 | 48.0 | 4.85e-01 | 97.6% | 92.5% |
| 3898522 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.63 | 52.0 | 4.93e-01 | 97.6% | 88.0% |
| 4972400 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.63 | 49.0 | 4.90e-01 | 97.6% | 88.9% |
| 5045333 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.63 | 50.0 | 4.38e-01 | 97.6% | 73.9% |
| 4269256 | 4.1.1.245 ↗ | beta barrels › SH3 › SH3 › SH3 › SspH | 0.62 | 46.0 | 4.19e-01 | 100.0% | 58.3% |
| 4948153 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.61 | 50.0 | 4.34e-01 | 100.0% | 58.6% |
| 3638396 | 4.1.1.303 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_retrovirus | 0.59 | 49.0 | 4.41e-01 | 97.6% | 80.0% |
| 3581143 | 4.1.1.43 ↗ | beta barrels › SH3 › SH3 › SH3 › SMN_Tudor | 0.59 | 47.0 | 4.19e-01 | 97.6% | 60.0% |
| 3935130 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 47.0 | 4.40e-01 | 97.6% | 72.7% |
| 3881121 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.58 | 47.0 | 3.69e-01 | 100.0% | 55.0% |
| 3671396 | 4.1.1.316 ↗ | beta barrels › SH3 › SH3 › SH3 › PUB62-63_C | 0.57 | 45.0 | 3.94e-01 | 97.6% | 60.3% |
| 3348456 | 4.1.1.322 ↗ | beta barrels › SH3 › SH3 › SH3 › GPKOW_C | 0.57 | 45.0 | 4.13e-01 | 97.6% | 71.7% |
| 3373298 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.55 | 44.0 | 2.80e-01 | 97.6% | 55.0% |
| 4003171 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.55 | 42.0 | 3.62e-01 | 97.6% | 60.0% |
| 3842441 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.55 | 43.0 | 3.94e-01 | 97.6% | 80.0% |
| 3188199 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.54 | 41.0 | 3.57e-01 | 97.6% | 60.0% |
| 4179811 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.54 | 39.0 | 3.93e-01 | 97.6% | 82.5% |
| 4203984 | 101.8.1.1 ↗ | alpha arrays › HTH › An anticodon-binding domain of class I aminoacyl-tRNA synthetases › An anticodon-binding domain of class I aminoacyl-tRNA synthetases › tRNA-synt_1f,Anticodon_2 | 0.54 | 43.0 | 2.49e-01 | 100.0% | 26.9% |
| 5014374 | 2005.1.1.17 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1f | 0.54 | 43.0 | 2.49e-01 | 100.0% | 26.9% |
| 3930461 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.53 | 41.0 | 3.56e-01 | 97.6% | 64.0% |
| 3894742 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.53 | 35.0 | 3.59e-01 | 85.4% | 75.0% |
| 3503771 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.52 | 43.0 | 3.83e-01 | 97.6% | 75.4% |
| 3633434 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.52 | 43.0 | 3.74e-01 | 97.6% | 70.0% |
| 3231704 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.51 | 39.0 | 3.56e-01 | 97.6% | 73.8% |
| 3846212 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.51 | 38.0 | 3.34e-01 | 97.6% | 60.0% |
| 3789233 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.51 | 40.0 | 3.64e-01 | 97.6% | 75.4% |
| 3416133 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.50 | 40.0 | 3.47e-01 | 97.6% | 65.3% |
| 3494671 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.50 | 36.0 | 3.57e-01 | 78.0% | 71.1% |