←Back to structures
MT682064.1__QMP81983.1__KpV2811_017__00017
Bact-VirMT682064.1__QMP81983.1__KpV2811_017__00017
Identity
- Accession:
- MT682064 ↗
- Kingdom:
- phage
Quality
94.0
mean pLDDT
Cluster
View cluster (34 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 36-92
Domain cluster:
rep: OL960574.1__UIU26847.1__SA91KD_38__00038__D6-81
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13392.13 best | HNH_3 | 76.9 | 9.60e-22 | 73.7% | 89.1% |
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1u3eM01 | 3.90.75.20 | Alpha Beta › Alpha-Beta Complex › Homing Intron 3 (I-Ppo) Encoded Endonuclease; Chain A › | 0.88 | 81.0 | 6.49e-01 | 100.0% | 57.5% |
| 3w6kC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 33.0 | 2.94e-01 | 100.0% | 41.4% |
| 1zud400 | 3.10.20.30 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Beta-grasp domain | 0.52 | 35.0 | 3.39e-01 | 70.2% | 71.2% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3539740 | 378.1.1.19 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_3 | 0.94 | 88.0 | 6.57e-01 | 100.0% | 56.0% |
| 3965202 | 378.1.1.19 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_3 | 0.93 | 84.0 | 6.56e-01 | 100.0% | 50.0% |
| 3586841 | 378.1.1.7 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › NUMOD4,HNH_3 | 0.89 | 82.0 | 6.34e-01 | 100.0% | 53.9% |
| 5053631 | 378.1.1.19 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_3 | 0.88 | 82.0 | 6.42e-01 | 100.0% | 81.8% |
| 3266965 | 378.1.2.2 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › Inactive Tox-GHH domain of teneurin › HNH_3 | 0.88 | 80.0 | 7.66e-01 | 100.0% | 96.9% |
| 4303143 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.79 | 54.0 | 4.73e-01 | 71.9% | 56.5% |
| 5010074 | 4.10.1.0 ↗ | beta barrels › SH3 › Fumarylacetoacetate hydrolase, FAH, N-terminal domain › Fumarylacetoacetate hydrolase, FAH, N-terminal domain | 0.60 | 40.0 | 3.65e-01 | 77.2% | 53.3% |
| 3439924 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.55 | 38.0 | 4.04e-01 | 96.5% | 87.8% |
| 3937226 | 136.1.1.3 ↗ | alpha complex topology › Heme-dependent peroxidases › Heme-dependent peroxidases › Heme-dependent peroxidases › An_peroxidase | 0.53 | 43.0 | 2.51e-01 | 91.2% | 56.1% |
| 4489673 | 3767.1.1.0 ↗ | a+b two layers › Giardia Dicer N-terminal domain › Giardia Dicer N-terminal domain › Giardia Dicer N-terminal domain | 0.53 | 45.0 | 2.75e-01 | 100.0% | 36.6% |
| 4966045 | 304.107.1.1 ↗ | a+b two layers › Alpha-beta plaits › Aminomethyltransferase folate-binding domain › Aminomethyltransferase folate-binding domain › GCV_T | 0.53 | 36.0 | 2.39e-01 | 73.7% | 85.1% |
| 3713445 | 2008.1.1.77 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › NOV_C | 0.53 | 44.0 | 3.44e-01 | 100.0% | 100.0% |
| 3419380 | 4.1.1.25 ↗ | beta barrels › SH3 › SH3 › SH3 › PAZ | 0.52 | 37.0 | 3.52e-01 | 78.9% | 71.4% |
| 3997999 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.51 | 30.0 | 3.08e-01 | 89.5% | 58.5% |
| 3776113 | 219.1.1.16 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C48 | 0.51 | 38.0 | 2.63e-01 | 89.5% | 66.5% |