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MT682064.1__QMP82026.1__KpV2811_060__00060

Bact-Vir

MT682064.1__QMP82026.1__KpV2811_060__00060

Identity

Accession:
MT682064 ↗
Kingdom:
phage

Quality

93.3 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 7-55
PDB
Domain cluster: representative
CATH (86)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5i4eA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.84 68.0 6.98e-01 87.8% 91.3%
4x9cD00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.83 70.0 6.58e-01 95.9% 76.7%
1bkbA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.83 63.0 5.69e-01 81.6% 100.0%
4m4zA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.80 66.0 6.76e-01 89.8% 100.0%
1b7tA02 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.80 69.0 6.83e-01 100.0% 90.4%
2vnuD04 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.79 54.0 4.61e-01 71.4% 100.0%
2xk0A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.79 66.0 5.92e-01 100.0% 66.7%
4f88102 3.90.1720.60 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › 0.79 69.0 4.47e-01 98.0% 28.6%
2d9tA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.79 70.0 7.04e-01 98.0% 100.0%
1u1sA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.78 66.0 6.04e-01 100.0% 71.2%
3goxA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.78 67.0 6.61e-01 95.9% 98.0%
2v1qA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.78 66.0 6.24e-01 95.9% 96.7%
4fw1A02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.78 67.0 6.54e-01 98.0% 88.9%
3fb9B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.78 68.0 5.66e-01 98.0% 69.0%
6bhdA03 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.78 65.0 5.99e-01 93.9% 73.0%
2e70A00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.77 67.0 5.93e-01 100.0% 67.6%
1uebA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.77 56.0 5.15e-01 77.6% 96.8%
4n4iA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.77 68.0 5.58e-01 100.0% 55.6%
2mysA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.77 63.0 6.43e-01 95.9% 93.8%
2ckkA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.77 66.0 6.50e-01 98.0% 98.1%
3c4sA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.77 65.0 6.28e-01 98.0% 93.0%
1kq1H00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.77 67.0 6.11e-01 100.0% 78.8%
2eqkA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.76 65.0 5.82e-01 100.0% 71.2%
4ytlA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.76 64.0 6.37e-01 95.9% 94.0%
2eifA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.76 57.0 5.33e-01 79.6% 100.0%
2x4jA01 2.30.30.600 Mainly Beta › Roll › SH3 type barrels. › 0.76 63.0 4.98e-01 98.0% 45.1%
1lckA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.76 65.0 6.19e-01 98.0% 96.6%
2cudA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.76 65.0 5.63e-01 100.0% 75.9%
4ii1A02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.76 65.0 6.21e-01 95.9% 83.9%
1ib8A02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.76 65.0 5.89e-01 98.0% 82.1%
1y71A00 2.30.30.430 Mainly Beta › Roll › SH3 type barrels. › Kinase associated protein B domain 0.76 67.0 5.17e-01 100.0% 55.0%
4iupA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.75 65.0 5.76e-01 98.0% 81.9%
3h8zA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.75 66.0 6.02e-01 100.0% 75.0%
7cfdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.75 65.0 5.77e-01 100.0% 68.5%
1x6gA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.75 65.0 5.58e-01 100.0% 75.3%
7afrX02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.75 64.0 6.02e-01 98.0% 85.0%
1zuyA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.75 65.0 6.19e-01 98.0% 100.0%
2ej9A02 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.75 60.0 6.10e-01 95.9% 91.8%
2yrvA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.75 65.0 5.00e-01 100.0% 51.3%
1mhnA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.75 65.0 6.19e-01 100.0% 84.7%
2do3A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.74 63.0 6.23e-01 98.0% 94.1%
4pmwA04 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.74 54.0 4.37e-01 77.6% 80.2%
4fssB00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.74 63.0 5.96e-01 100.0% 100.0%
2fpeA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.74 64.0 5.97e-01 100.0% 96.8%
1x6bA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.73 62.0 5.75e-01 98.0% 90.6%
6bogA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.73 61.0 6.04e-01 95.9% 92.3%
2kxcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.73 61.0 5.60e-01 98.0% 89.6%
1k1zA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.72 61.0 5.30e-01 98.0% 85.9%
1khcA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.72 63.0 5.71e-01 98.0% 83.1%
2hbpA00 2.30.30.700 Mainly Beta › Roll › SH3 type barrels. › SLA1 homology domain 1 0.72 60.0 5.53e-01 95.9% 77.3%
7u32F02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.72 59.0 5.87e-01 95.9% 100.0%
3i35A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.72 59.0 5.73e-01 95.9% 100.0%
2vb6A01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.72 63.0 6.16e-01 100.0% 90.7%
6vlfA03 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.71 58.0 5.59e-01 95.9% 100.0%
2rqrA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.71 59.0 4.53e-01 98.0% 50.4%
1n27A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.71 61.0 4.97e-01 100.0% 60.4%
1zuuA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.71 57.0 5.49e-01 91.8% 100.0%
5f3yA05 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.71 60.0 5.27e-01 100.0% 93.5%
5l37C00 2.40.50.220 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › EutN/Ccml 0.71 51.0 4.32e-01 79.6% 94.2%
6my0A02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.71 62.0 5.67e-01 100.0% 75.4%
2eczA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.70 58.0 5.26e-01 95.9% 84.3%
1yn8A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.70 58.0 5.59e-01 98.0% 100.0%
2jngA00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.70 57.0 5.09e-01 98.0% 71.4%
3pvlA05 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.70 58.0 5.16e-01 100.0% 92.1%
2e5kA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 57.0 5.34e-01 98.0% 98.4%
4c5eC02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.69 60.0 4.85e-01 100.0% 53.1%
1ybyA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.69 51.0 4.77e-01 81.6% 98.4%
3zuaA01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.69 59.0 4.32e-01 98.0% 37.4%
1igqB00 2.30.30.150 Mainly Beta › Roll › SH3 type barrels. › KorB, C-terminal domain 0.68 57.0 5.53e-01 98.0% 84.2%
3htyA00 2.40.128.280 Mainly Beta › Beta Barrel › Lipocalin › 0.67 52.0 4.16e-01 83.7% 48.9%
4u3vA00 3.10.129.110 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase 0.66 48.0 3.08e-01 79.6% 40.5%
3ceyB01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.66 55.0 4.08e-01 100.0% 37.6%
4cc2A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.65 55.0 5.14e-01 100.0% 100.0%
1df0A02 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.65 54.0 4.51e-01 98.0% 55.4%
2a0aA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.65 45.0 3.32e-01 73.5% 93.9%
2qmiA02 2.40.128.210 Mainly Beta › Beta Barrel › Lipocalin › Pab87 octamerisation domain 0.65 50.0 4.05e-01 87.8% 52.0%
3e8lC00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.65 51.0 3.71e-01 100.0% 93.2%
3bwsA02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.63 48.0 2.98e-01 87.8% 36.8%
1olzA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.60 50.0 2.95e-01 100.0% 92.2%
5wbyC01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.58 49.0 3.04e-01 98.0% 86.9%
2in5A00 2.40.360.10 Mainly Beta › Beta Barrel › YmcC-like fold › YmcC-like 0.57 46.0 3.23e-01 98.0% 83.6%
2pn5A03 2.60.40.1940 Mainly Beta › Sandwich › Immunoglobulin-like › 0.56 39.0 3.18e-01 75.5% 92.4%
2pn2A00 3.30.300.20 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain 0.52 39.0 2.91e-01 83.7% 30.7%
6ruiB04 3.90.1110.10 Alpha Beta › Alpha-Beta Complex › Dna-directed Rna Polymerase Ii 140kd Polypeptide; Chain: B; domain 3 › RNA polymerase Rpb2, domain 2 0.52 43.0 3.00e-01 98.0% 97.8%
1w0pA03 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.51 41.0 2.94e-01 100.0% 58.8%
6yfiB01 3.30.380.10 Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein 0.50 36.0 2.77e-01 81.6% 43.7%
ECOD (100)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3907619 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.86 75.0 6.14e-01 100.0% 55.3%
3877485 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.85 72.0 5.94e-01 100.0% 54.1%
3854862 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.84 72.0 5.74e-01 100.0% 48.4%
3570399 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.84 74.0 6.75e-01 98.0% 81.5%
5058671 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.84 69.0 6.69e-01 98.0% 80.0%
4147056 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.84 73.0 5.70e-01 100.0% 47.0%
3923813 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.84 70.0 6.40e-01 93.9% 89.2%
4058174 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.83 74.0 6.76e-01 100.0% 76.9%
3586487 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.82 69.0 5.74e-01 95.9% 54.1%
3586203 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.82 61.0 5.54e-01 79.6% 87.7%
3768094 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.82 70.0 5.46e-01 100.0% 44.8%
4002896 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.82 72.0 5.86e-01 100.0% 53.3%
5077969 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.82 72.0 6.07e-01 98.0% 63.7%
4015071 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.82 72.0 6.34e-01 98.0% 70.0%
4000280 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.81 70.0 6.76e-01 98.0% 85.5%
3535278 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.81 73.0 6.76e-01 100.0% 80.0%
3230083 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.81 68.0 5.57e-01 100.0% 51.1%
3881119 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.81 71.0 6.01e-01 100.0% 60.0%
3508415 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.81 70.0 5.07e-01 100.0% 36.2%
3261395 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.81 69.0 6.59e-01 100.0% 81.0%
3920666 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.81 71.0 5.76e-01 100.0% 53.3%
3547084 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.81 71.0 5.77e-01 100.0% 53.3%
4011604 4.1.1.13 beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.81 72.0 6.21e-01 100.0% 73.3%
3765274 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.80 70.0 5.77e-01 100.0% 56.7%
3943751 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.80 70.0 6.39e-01 98.0% 78.5%
1140051 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.80 68.0 6.89e-01 93.9% 100.0%
3562168 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.80 70.0 5.72e-01 100.0% 53.3%
3510526 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.80 69.0 6.66e-01 95.9% 89.1%
3913334 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.80 71.0 6.27e-01 100.0% 68.6%
3866505 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.80 68.0 6.55e-01 95.9% 90.9%
3486328 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.79 67.0 6.33e-01 98.0% 78.3%
3671986 4.1.1.238 beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 0.79 68.0 6.04e-01 100.0% 67.1%
5017215 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.79 56.0 5.37e-01 73.5% 100.0%
3389177 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.79 69.0 5.46e-01 100.0% 48.0%
3389169 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.79 67.0 5.61e-01 100.0% 55.3%
3237859 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.79 69.0 6.71e-01 100.0% 92.7%
3617111 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.79 67.0 5.50e-01 100.0% 52.2%
5022491 4.1.1.182 beta barrels › SH3 › SH3 › SH3 › DUF2097 0.79 71.0 5.85e-01 100.0% 72.9%
4098870 4.7.1.1 beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 0.79 69.0 5.57e-01 100.0% 58.9%
3358753 4.1.1.381 beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5, KOW4_SPT5 0.78 68.0 4.67e-01 100.0% 29.1%
3883159 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.78 69.0 5.64e-01 100.0% 56.7%
3498280 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.78 70.0 5.08e-01 100.0% 38.5%
3486327 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.78 69.0 6.46e-01 100.0% 81.7%
4883808 148.1.3.202 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › KOW5_SPT5 0.78 66.0 6.51e-01 98.0% 90.4%
3476179 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.78 68.0 5.50e-01 100.0% 55.8%
3474715 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.78 66.0 6.10e-01 100.0% 73.8%
3492982 4.1.1.12 beta barrels › SH3 › SH3 › SH3 › PWWP 0.78 68.0 4.94e-01 100.0% 37.0%
3875218 4.1.1.128 beta barrels › SH3 › SH3 › SH3 › Tudor_4 0.78 65.0 5.95e-01 93.9% 70.8%
4963650 4.1.1.488 beta barrels › SH3 › SH3 › SH3 › DUF7346 0.77 64.0 6.26e-01 100.0% 85.5%
3302817 4.1.1.362 beta barrels › SH3 › SH3 › SH3 › KOW6_SPT51-2, KOW7_SPT5 0.77 67.0 5.21e-01 100.0% 44.0%
3620094 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.77 66.0 6.36e-01 100.0% 85.5%
3651961 4.1.1.251 beta barrels › SH3 › SH3 › SH3 › KOW7_SPT5 0.77 67.0 6.50e-01 100.0% 87.3%
4121981 4.1.1.325 beta barrels › SH3 › SH3 › SH3 › KOW, KOW2_Spt5 0.77 67.0 5.01e-01 100.0% 39.2%
3931905 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.77 67.0 5.12e-01 100.0% 46.1%
3999725 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.77 68.0 5.65e-01 100.0% 61.2%
3721794 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.77 67.0 6.31e-01 100.0% 83.3%
4936291 4.1.1.487 beta barrels › SH3 › SH3 › SH3 › DUF7205 0.77 66.0 6.12e-01 100.0% 81.5%
3712782 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.77 67.0 5.73e-01 100.0% 67.5%
4372288 4.1.1.238 beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 0.77 67.0 6.30e-01 100.0% 83.3%
4863023 4.1.1.238 beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 0.77 60.0 6.12e-01 91.8% 89.6%
3881123 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.77 67.0 5.55e-01 100.0% 56.5%
3218198 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.77 62.0 6.06e-01 93.9% 81.8%
3398093 4.1.1.43 beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.77 67.0 6.34e-01 100.0% 83.3%
4357819 4.1.1.238 beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 0.76 66.0 5.93e-01 100.0% 74.3%
3765126 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.76 62.0 6.05e-01 91.8% 100.0%
3914746 4.1.1.128 beta barrels › SH3 › SH3 › SH3 › Tudor_4 0.76 64.0 5.68e-01 93.9% 65.7%
None 0.76 68.0 3.67e-01 100.0% 7.8%
5079023 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.76 62.0 6.43e-01 93.9% 100.0%
3541241 4.1.1.8 beta barrels › SH3 › SH3 › SH3 › IN_DBD_C 0.76 67.0 6.30e-01 100.0% 81.7%
3684908 4.1.1.238 beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 0.76 66.0 5.78e-01 100.0% 68.0%
None 0.76 68.0 3.69e-01 100.0% 6.6%
4890270 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.76 63.0 6.15e-01 95.9% 85.2%
4200330 4.1.1.249 beta barrels › SH3 › SH3 › SH3 › KOW2_Spt5 0.76 66.0 4.92e-01 100.0% 39.2%
4098445 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.76 66.0 6.20e-01 100.0% 81.7%
2725406 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.76 66.0 5.62e-01 100.0% 74.4%
3169607 4.1.1.238 beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 0.76 66.0 5.76e-01 100.0% 66.7%
4026957 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.76 67.0 6.27e-01 100.0% 81.7%
4629022 4.1.1.238 beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 0.76 66.0 5.89e-01 100.0% 75.7%
3830187 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.76 66.0 6.41e-01 100.0% 89.1%
4029093 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.75 65.0 4.61e-01 100.0% 31.6%
3229601 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.75 65.0 6.10e-01 100.0% 80.0%
3627869 4.1.1.347 beta barrels › SH3 › SH3 › SH3 › KOW7_SPT5, KOW6_SPT5 0.75 65.0 4.58e-01 100.0% 36.1%
3616243 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.75 66.0 6.37e-01 100.0% 89.1%
3241890 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.75 65.0 5.19e-01 100.0% 62.0%
3795121 4.1.1.110 beta barrels › SH3 › SH3 › SH3 › Tudor_FRX1 0.74 65.0 5.98e-01 100.0% 75.4%
3622846 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.74 62.0 6.25e-01 100.0% 94.0%
3517728 4.1.1.43 beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.74 64.0 5.74e-01 100.0% 70.0%
3482646 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 63.0 4.19e-01 100.0% 32.0%
3479037 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 63.0 5.41e-01 100.0% 80.0%
3476188 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.73 62.0 5.44e-01 98.0% 77.3%
3469800 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.73 61.0 5.30e-01 98.0% 78.8%
3226229 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.71 59.0 5.52e-01 100.0% 93.8%
4972486 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.71 52.0 5.04e-01 79.6% 80.0%
3484618 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.71 57.0 5.12e-01 95.9% 80.0%
3898170 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.70 58.0 5.22e-01 100.0% 96.0%
2717779 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.70 58.0 5.02e-01 98.0% 70.7%
3275404 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.69 60.0 5.65e-01 100.0% 81.7%
3620934 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.69 57.0 5.00e-01 100.0% 78.8%
3249876 5.1.4.254 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_NOL10_N 0.61 47.0 2.96e-01 87.8% 39.3%
3266157 7579.1.1.14 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Lipase_3 0.60 48.0 3.05e-01 89.8% 95.8%
D2 medium residues 59-91
PDB
Domain cluster: representative
CATH (38)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3kp1E02 1.10.8.1000 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ornithine 4,5 aminomutase S component, alpha subunit-like 0.92 73.0 5.59e-01 87.9% 41.4%
3dfuA02 1.10.1040.40 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › 0.90 78.0 5.50e-01 100.0% 33.3%
1yqgA02 1.10.3730.10 Mainly Alpha › Orthogonal Bundle › ProC C-terminal domain-like fold › ProC C-terminal domain-like 0.90 78.0 5.30e-01 100.0% 29.2%
5hnmC00 3.30.1380.10 Alpha Beta › 2-Layer Sandwich › Muramoyl-pentapeptide Carboxypeptidase; domain 2 › 0.90 79.0 4.89e-01 100.0% 48.3%
1tj7A03 1.10.40.30 Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › Fumarase/aspartase (C-terminal domain) 0.87 68.0 5.36e-01 97.0% 42.3%
3triA02 1.10.3730.10 Mainly Alpha › Orthogonal Bundle › ProC C-terminal domain-like fold › ProC C-terminal domain-like 0.86 73.0 5.14e-01 100.0% 33.0%
2ahrA02 1.10.3730.10 Mainly Alpha › Orthogonal Bundle › ProC C-terminal domain-like fold › ProC C-terminal domain-like 0.86 70.0 4.99e-01 100.0% 32.1%
1tfeA02 1.10.286.20 Mainly Alpha › Orthogonal Bundle › GTP Cyclohydrolase I; Chain A, domain 1 › 0.83 68.0 6.32e-01 100.0% 75.6%
1dcnA03 1.10.40.30 Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › Fumarase/aspartase (C-terminal domain) 0.82 64.0 5.06e-01 97.0% 41.7%
1cukA03 1.10.8.10 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain 0.82 67.0 5.99e-01 100.0% 64.6%
3ci0K02 1.10.40.60 Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › EpsJ-like 0.80 69.0 4.73e-01 100.0% 29.2%
3c3dA02 1.10.8.240 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › CofD-like domain 0.79 62.0 4.78e-01 100.0% 37.5%
3l9wA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.79 65.0 4.21e-01 100.0% 20.9%
4h8aB01 1.10.1530.10 Mainly Alpha › Orthogonal Bundle › Hypothetical Oxidoreductase Yiak; Chain: A, domain 1 › Malate/L-lactate/L-sulpholactate dehydrogenase, four-helix barrel 0.79 65.0 5.44e-01 97.0% 55.0%
4jndA01 1.10.1740.220 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › 0.78 64.0 4.34e-01 100.0% 26.2%
2zcuA02 3.90.25.10 Alpha Beta › Alpha-Beta Complex › UDP-galactose 4-epimerase; domain 1 › UDP-galactose 4-epimerase, domain 1 0.77 59.0 4.09e-01 84.8% 24.3%
1ss3A00 1.10.287.720 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Pollen allergen ole e 6 0.77 62.0 5.62e-01 100.0% 70.0%
4s1hA00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.77 63.0 3.69e-01 100.0% 11.5%
3l6gA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.76 62.0 4.08e-01 100.0% 40.0%
3fdjA01 3.40.50.10440 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Dihydroxyacetone kinase; domain 1 0.75 60.0 4.25e-01 93.9% 28.4%
4yzgA00 3.60.40.10 Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain 0.75 59.0 3.48e-01 100.0% 48.0%
3jr7A01 3.40.50.10440 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Dihydroxyacetone kinase; domain 1 0.74 61.0 4.27e-01 100.0% 28.0%
3ke6B01 3.60.40.10 Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain 0.74 58.0 3.61e-01 100.0% 15.4%
2ddmB00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.73 58.0 3.49e-01 100.0% 12.5%
1ku9B01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 60.0 4.56e-01 100.0% 42.5%
3da1A03 1.10.8.870 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Alpha-glycerophosphate oxidase, cap domain 0.73 55.0 3.85e-01 97.0% 23.5%
2aplA01 1.10.8.330 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › PG0816-like 0.73 59.0 4.88e-01 100.0% 51.5%
3nctA00 3.40.50.11880 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Plasmid SOS inhibition protein 0.71 58.0 3.95e-01 100.0% 24.1%
1o4xA02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.71 52.0 4.56e-01 84.8% 55.6%
2go7A02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.70 52.0 4.24e-01 97.0% 40.3%
2pjqA01 1.10.472.50 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › HD-domain/PDEase-like 0.67 53.0 3.95e-01 100.0% 34.8%
1e3oC02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.66 46.0 4.18e-01 75.8% 56.2%
2q0yA01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.64 52.0 3.56e-01 100.0% 24.6%
2qs7A00 3.40.1260.10 Alpha Beta › 3-Layer(aba) Sandwich › Hypothetical Protein Ychn; Chain: A, › DsrEFH-like 0.63 53.0 3.53e-01 100.0% 91.3%
1rajA01 4.10.880.10 Few Secondary Structures › Irregular › Poliovirus 3D polymerase; domain 1 (Nucleotidyltransferase) › Poliovirus 3D polymerase Domain 1 (Nucleotidyltransferase) 0.62 52.0 4.71e-01 93.9% 100.0%
1rr7A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.61 43.0 4.27e-01 100.0% 71.7%
6xzqA01 3.40.91.90 Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › Influenza RNA-dependent RNA polymerase subunit PA, endonuclease domain 0.61 42.0 2.94e-01 93.9% 19.8%
3ckcA02 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.58 49.0 3.12e-01 100.0% 28.8%
ECOD (21)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3256442 3721.1.1.1 alpha bundles › Protein regulator of cytokinesis 1 (PRC1) dimerization domain › Protein regulator of cytokinesis 1 (PRC1) dimerization domain › Protein regulator of cytokinesis 1 (PRC1) dimerization domain › VIT1 0.90 80.0 6.03e-01 100.0% 44.0%
3960202 3721.1.1.1 alpha bundles › Protein regulator of cytokinesis 1 (PRC1) dimerization domain › Protein regulator of cytokinesis 1 (PRC1) dimerization domain › Protein regulator of cytokinesis 1 (PRC1) dimerization domain › VIT1 0.90 78.0 6.10e-01 100.0% 47.1%
53250 129.1.1.0 alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like 0.90 78.0 5.34e-01 100.0% 29.7%
3839755 129.1.1.15 alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › P5CR_dimer 0.90 77.0 5.49e-01 100.0% 34.7%
3188842 129.1.1.15 alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › P5CR_dimer 0.88 75.0 5.03e-01 100.0% 27.2%
3988185 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.88 66.0 6.19e-01 81.8% 67.5%
4969717 101.1.17.0 alpha arrays › HTH › HTH › FF domain 0.87 75.0 6.59e-01 100.0% 70.0%
4210413 129.1.1.15 alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › P5CR_dimer 0.87 73.0 5.22e-01 100.0% 34.0%
3286823 129.1.1.15 alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › P5CR_dimer 0.87 73.0 4.95e-01 100.0% 28.3%
4474222 101.1.2.765 alpha arrays › HTH › HTH › winged helix domain › TrfA 0.83 60.0 3.49e-01 78.8% 11.5%
3265661 3721.1.1.1 alpha bundles › Protein regulator of cytokinesis 1 (PRC1) dimerization domain › Protein regulator of cytokinesis 1 (PRC1) dimerization domain › Protein regulator of cytokinesis 1 (PRC1) dimerization domain › VIT1 0.83 68.0 5.48e-01 100.0% 47.1%
3270733 108.1.1.73 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5+EF-hand_7 0.82 64.0 4.97e-01 100.0% 38.8%
3970102 4953.1.1.0 beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like 0.81 66.0 4.96e-01 97.0% 40.0%
5019815 103.1.1.0 alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain 0.80 62.0 5.79e-01 93.9% 73.3%
3952706 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.80 65.0 5.15e-01 100.0% 44.0%
4181082 243.9.1.2 a+b two layers › Cystatin-like › Nuclease A inhibitor (NuiA)-related › Nuclease A inhibitor (NuiA)-related › Maf1 0.79 65.0 4.21e-01 100.0% 20.6%
4564202 2004.1.1.194 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C_2 0.78 60.0 3.63e-01 100.0% 12.9%
1937178 2010.1.1.1 a/b three-layered sandwiches › EDD domain › EDD domain › EDD domain › DegV 0.74 61.0 4.00e-01 100.0% 21.2%
4150218 2003.1.1.28 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › TrkA_N 0.69 56.0 3.63e-01 97.0% 19.4%
4948274 164.1.1.1 alpha bundles › Chorismate mutase II › Chorismate mutase II › Chorismate mutase II › CM_2 0.68 55.0 4.43e-01 100.0% 45.3%
4502561 283.1.1.3 a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › Creatinase/aminopeptidase › Creatinase/aminopeptidase › Pantoate_ligase 0.66 52.0 3.90e-01 100.0% 34.0%