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MT682391.1__QOC54443.1__Atoyac23_29__00029

Bact-Vir

MT682391.1__QOC54443.1__Atoyac23_29__00029

Identity

Accession:
MT682391 ↗
Kingdom:
phage

Quality

77.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Autographivirales› Autonotataviridae› Aeromonas_phage_Atoyac23

TaxID: 2767552

Cluster

View cluster (3 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 12-70
PDB
Domain cluster: rep: NC_047778.1__YP_009787312.1__QLL94_gp12__00012__D2-66
CATH (28)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4x9cD00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.68 49.0 4.91e-01 98.3% 75.0%
1kq1H00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.67 48.0 4.68e-01 100.0% 69.7%
2ej9A02 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.65 46.0 4.87e-01 96.6% 89.8%
1z5hA03 2.60.40.1910 Mainly Beta › Sandwich › Immunoglobulin-like › 0.65 39.0 3.67e-01 100.0% 47.9%
7afrX02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.65 49.0 4.92e-01 100.0% 83.3%
1b34B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.64 51.0 4.82e-01 100.0% 71.6%
3kihC01 2.20.25.510 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.62 35.0 4.31e-01 94.9% 94.1%
1d3bC00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.61 53.0 5.05e-01 100.0% 81.7%
1r7lA00 3.30.2120.10 Alpha Beta › 2-Layer Sandwich › Bacillus phage protein › Bacillus phage protein-like 0.61 42.0 3.59e-01 74.6% 89.3%
4f7uF00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.61 53.0 4.98e-01 100.0% 79.5%
4c92A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.60 54.0 4.17e-01 100.0% 48.5%
5kmpB00 3.50.50.100 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › 0.59 48.0 2.96e-01 93.2% 30.6%
4emhA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.59 51.0 5.12e-01 98.3% 96.7%
4f7uG00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.57 50.0 4.84e-01 100.0% 86.8%
2cyyA02 3.30.70.920 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain 0.57 49.0 4.25e-01 100.0% 74.7%
5a35A00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.57 41.0 3.42e-01 79.7% 67.0%
2yj6A02 3.40.1110.10 Alpha Beta › 3-Layer(aba) Sandwich › Calcium-transporting ATPase, cytoplasmic domain N › Calcium-transporting ATPase, cytoplasmic domain N 0.55 41.0 3.60e-01 83.1% 94.7%
3kd9A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.55 49.0 3.51e-01 100.0% 46.7%
5zwlE01 2.60.15.10 Mainly Beta › Sandwich › ATP Synthase; domain 1 › F0F1 ATP synthase delta/epsilon subunit, N-terminal 0.54 46.0 4.11e-01 100.0% 79.5%
2fjrA02 2.10.109.10 Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A 0.53 37.0 3.12e-01 100.0% 39.8%
1ghjA00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.52 40.0 3.74e-01 88.1% 75.9%
8dqwG01 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.52 40.0 2.93e-01 86.4% 72.0%
2dn8A01 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.51 35.0 3.35e-01 72.9% 76.4%
3vn5A01 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.51 36.0 3.50e-01 83.1% 63.8%
2pqhB00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.51 42.0 4.12e-01 98.3% 87.7%
2edgA00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.51 40.0 3.21e-01 89.8% 57.7%
1k8mA00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.51 40.0 3.60e-01 89.8% 73.6%
1q44A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 35.0 2.33e-01 81.4% 15.5%
ECOD (34)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4995694 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.80 63.0 6.48e-01 100.0% 90.9%
5034040 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 53.0 5.45e-01 100.0% 85.5%
3036710 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 51.0 5.06e-01 100.0% 73.0%
5063433 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 48.0 5.15e-01 100.0% 90.0%
5004476 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 47.0 4.59e-01 100.0% 70.8%
4149821 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 44.0 4.38e-01 100.0% 76.7%
4033484 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 50.0 4.87e-01 100.0% 84.4%
4146780 325.1.7.4 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › GCV_H 0.58 41.0 3.48e-01 79.7% 67.3%
3720564 325.1.7.1 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › Biotin_lipoyl 0.56 39.0 3.76e-01 74.6% 80.0%
4087658 325.1.7.4 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › GCV_H 0.56 40.0 3.29e-01 79.7% 64.2%
4020444 325.1.7.1 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › Biotin_lipoyl 0.56 38.0 3.46e-01 72.9% 67.1%
3788776 5.1.4.38 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › ANAPC1 0.56 40.0 2.48e-01 100.0% 13.4%
4027957 325.1.7.4 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › GCV_H 0.55 40.0 3.16e-01 79.7% 65.2%
4620176 325.1.7.4 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › GCV_H 0.55 40.0 3.19e-01 79.7% 60.0%
4678815 325.1.7.4 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › GCV_H 0.55 40.0 3.14e-01 81.4% 53.8%
135987 325.1.7.0 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.55 39.0 3.16e-01 79.7% 57.9%
4333314 325.1.7.0 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.55 42.0 4.16e-01 93.2% 78.5%
None — 0.54 37.0 3.05e-01 74.6% 58.5%
4933817 325.1.7.4 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › GCV_H 0.54 44.0 3.49e-01 91.5% 82.1%
3589658 325.1.7.4 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › GCV_H 0.53 38.0 3.27e-01 79.7% 71.4%
4047119 325.1.7.0 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.53 40.0 3.91e-01 93.2% 76.9%
3425974 325.1.7.1 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › Biotin_lipoyl 0.52 36.0 3.28e-01 74.6% 62.2%
4945296 325.1.7.4 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › GCV_H 0.52 42.0 3.28e-01 91.5% 71.9%
3958619 325.1.7.4 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › GCV_H 0.52 42.0 3.35e-01 91.5% 79.2%
2410169 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.51 43.0 3.91e-01 98.3% 77.1%
None — 0.51 42.0 3.34e-01 93.2% 70.5%
4240808 325.1.7.4 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › GCV_H 0.51 41.0 3.27e-01 91.5% 72.3%
3380051 325.1.7.4 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › GCV_H 0.51 41.0 3.23e-01 91.5% 69.4%
None — 0.51 41.0 3.31e-01 91.5% 75.0%
4987274 325.1.7.4 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › GCV_H 0.51 41.0 3.12e-01 91.5% 62.7%
4943062 325.1.7.4 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › GCV_H 0.51 41.0 3.27e-01 91.5% 75.2%
4096170 325.1.7.4 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › GCV_H 0.51 40.0 3.34e-01 91.5% 81.7%
4196663 325.1.7.4 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › GCV_H 0.51 40.0 3.09e-01 89.8% 64.8%
3969019 325.1.7.4 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › GCV_H 0.50 40.0 3.15e-01 91.5% 70.4%