←Back to structures

MT682716.1__QLF82471.1__F10B_0061__00103

Bact-Vir

MT682716.1__QLF82471.1__F10B_0061__00103

Identity

Accession:
MT682716 ↗
Kingdom:
phage

Quality

76.9 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Vequintavirus› Escherichia_phage_vB_EcoM_Gotham

TaxID: 2750849

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 146-236
PDB
Domain cluster: rep: ON286973.1__USL84859.1__A512_215__00041__D169-235
D2 high residues 239-288
PDB
Domain cluster: representative
CATH (50)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2q1zB02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.70 50.0 4.04e-01 76.0% 95.7%
1zldA00 2.60.40.1920 Mainly Beta › Sandwich › Immunoglobulin-like › Proteinaceous host-selective toxin ToxA 0.69 50.0 3.97e-01 78.0% 77.5%
5fq0A00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.66 48.0 3.77e-01 78.0% 85.5%
3pcrA01 3.10.450.460 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › EspG protein, N-terminal domain 0.66 48.0 3.91e-01 78.0% 53.2%
2in5A00 2.40.360.10 Mainly Beta › Beta Barrel › YmcC-like fold › YmcC-like 0.66 53.0 3.60e-01 92.0% 52.8%
4rbnA01 3.10.450.330 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.65 57.0 4.26e-01 100.0% 56.6%
3ltiA01 3.90.1110.10 Alpha Beta › Alpha-Beta Complex › Dna-directed Rna Polymerase Ii 140kd Polypeptide; Chain: B; domain 3 › RNA polymerase Rpb2, domain 2 0.64 54.0 3.85e-01 100.0% 31.5%
4nsxA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.64 54.0 3.31e-01 98.0% 59.8%
5h9kA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.64 52.0 3.77e-01 94.0% 42.2%
3ktaA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.63 54.0 3.81e-01 100.0% 71.3%
5h66A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.63 54.0 3.67e-01 100.0% 57.8%
2dk7A00 2.20.70.10 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › 0.61 46.0 4.09e-01 84.0% 56.2%
2yf0A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.61 45.0 3.82e-01 82.0% 70.1%
4a2lF02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.61 52.0 3.22e-01 100.0% 36.1%
2p18A00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.60 51.0 3.22e-01 100.0% 28.6%
5g5gB02 3.30.390.50 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain 0.60 46.0 3.83e-01 86.0% 64.9%
1w1hD00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.60 52.0 3.85e-01 100.0% 75.9%
1kcgC00 3.30.500.10 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like 0.60 45.0 3.19e-01 84.0% 89.4%
3s27B01 3.10.450.330 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.58 49.0 3.70e-01 100.0% 69.2%
1k32A01 2.120.10.60 Mainly Beta › 6 Propeller › Neuraminidase › Tricorn protease N-terminal domain 0.58 48.0 3.05e-01 94.0% 62.1%
4wsqB00 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.58 47.0 2.99e-01 98.0% 50.0%
4k3yC00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.58 47.0 2.91e-01 100.0% 34.6%
2qe8A00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.58 47.0 2.94e-01 100.0% 47.5%
3jcuO01 2.40.160.30 Mainly Beta › Beta Barrel › Porin › Photosystem II, cytochrome c-550 precursor 0.58 43.0 3.09e-01 88.0% 51.7%
3o4hA01 2.130.10.150 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Peptidase/esterase 'gauge' domain 0.57 48.0 3.05e-01 100.0% 38.0%
5ighA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.57 43.0 3.58e-01 82.0% 96.6%
1g9mG00 2.170.40.20 Mainly Beta › Beta Complex › HIV Envelope Protein Gp120; Chain G › Human immunodeficiency virus 1, Gp160, envelope glycoprotein 0.57 46.0 2.92e-01 96.0% 67.2%
3g12B00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.56 40.0 3.15e-01 78.0% 37.2%
4h87A00 2.60.200.20 Mainly Beta › Sandwich › Tumour Suppressor Smad4 › 0.56 45.0 3.47e-01 94.0% 91.9%
3oxhA01 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.55 41.0 3.11e-01 84.0% 35.0%
4agiA00 2.120.10.70 Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin 0.55 46.0 2.89e-01 100.0% 61.8%
3c96A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.55 38.0 2.67e-01 72.0% 40.5%
3f7wA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.55 44.0 3.71e-01 92.0% 100.0%
3u97A00 3.10.450.530 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Ribonuclease toxin, BrnT, of type II toxin-antitoxin system 0.55 42.0 3.72e-01 86.0% 64.9%
7jl1B01 2.60.120.920 Mainly Beta › Sandwich › Jelly Rolls › SPRY domain 0.55 46.0 3.37e-01 100.0% 60.3%
2ct4A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.55 39.0 3.56e-01 78.0% 77.1%
1zarA02 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.54 43.0 3.76e-01 90.0% 79.0%
4mi7A00 3.90.70.170 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.54 41.0 3.11e-01 84.0% 39.5%
5zr6A02 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.54 39.0 3.54e-01 82.0% 82.9%
2essA02 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.54 38.0 3.14e-01 76.0% 88.9%
3dbxA01 3.30.500.10 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like 0.54 44.0 3.12e-01 96.0% 71.7%
1zy9A03 2.60.40.2760 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 38.0 3.96e-01 78.0% 95.3%
3n4eA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.53 39.0 3.15e-01 80.0% 92.3%
4rqyA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.53 39.0 3.02e-01 78.0% 63.4%
2k0mA00 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 38.0 3.09e-01 82.0% 62.5%
2eqjA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.52 38.0 3.58e-01 82.0% 71.2%
2fhdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.52 37.0 3.56e-01 80.0% 88.7%
1jb0D00 3.30.1470.10 Alpha Beta › 2-Layer Sandwich › Photosystem 1 Reaction Centre Subunit Ii; Chain: D; › Photosystem I PsaD, reaction center subunit II 0.51 35.0 2.73e-01 76.0% 60.9%
2dl5A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.51 35.0 3.16e-01 76.0% 69.2%
1nr4C00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.50 34.0 3.18e-01 70.0% 53.0%
ECOD (57)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4537989 12.3.1.24 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › YidC_periplas 0.71 57.0 3.63e-01 92.0% 60.7%
4212114 4041.1.1.1 ↗ a+b complex topology › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › RNA_pol_Rpb2_2 0.71 62.0 4.24e-01 100.0% 30.9%
5031245 3504.3.1.1 ↗ beta barrels › MutM N-terminal domain-like › Fibrinogen binding protein N-terminal domain › Fibrinogen binding protein N-terminal domain › NFACT_N 0.70 57.0 4.08e-01 92.0% 31.3%
3495981 77.2.1.1 ↗ beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN 0.70 58.0 4.12e-01 96.0% 44.4%
3685742 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.66 55.0 3.25e-01 96.0% 92.6%
1563689 3304.1.1.2 ↗ a+b two layers › Cellular targeting domain in sucrose synthase-1 › Cellular targeting domain in sucrose synthase-1 › Cellular targeting domain in sucrose synthase-1 › SUS_N 0.65 57.0 4.25e-01 100.0% 56.2%
4974812 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.65 47.0 2.86e-01 78.0% 26.7%
4929323 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.64 49.0 3.83e-01 84.0% 79.1%
3790542 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.64 56.0 3.44e-01 100.0% 51.7%
3255827 220.1.1.29 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_3 0.64 56.0 4.09e-01 100.0% 82.2%
4167925 5.1.4.309 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, PF29630 0.64 50.0 3.01e-01 86.0% 20.6%
3441395 5.1.3.159 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF7595 0.64 52.0 3.19e-01 92.0% 51.9%
3827907 64.1.1.1 ↗ beta meanders › WW domain-like › WW domain › WW domain › WW 0.63 47.0 4.63e-01 84.0% 74.5%
3719228 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.63 51.0 2.83e-01 90.0% 36.3%
4849380 79.1.1.37 ↗ beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › PF30765 0.63 49.0 3.47e-01 86.0% 33.5%
3456785 5.1.2.2 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › WD40 0.62 51.0 3.51e-01 92.0% 75.0%
4029129 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.62 54.0 3.30e-01 100.0% 47.3%
4961453 5.1.4.40 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PQQ_2 0.61 52.0 3.13e-01 100.0% 83.7%
3730082 868.1.1.0 ↗ a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related 0.61 47.0 2.94e-01 86.0% 23.1%
5007469 5.1.11.6 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › Beta_propel 0.61 50.0 2.94e-01 100.0% 40.1%
3393233 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.60 51.0 3.27e-01 100.0% 43.6%
4608279 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.60 43.0 4.01e-01 78.0% 60.0%
5081654 211.1.1.0 ↗ a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 0.60 44.0 4.22e-01 82.0% 71.7%
4929797 252.2.1.0 ↗ a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like 0.60 46.0 4.41e-01 86.0% 83.1%
5009590 5.1.4.65 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › APH-like_N 0.59 50.0 3.15e-01 100.0% 36.4%
3480636 5.1.5.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.59 51.0 2.95e-01 100.0% 46.7%
4957034 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.59 50.0 3.07e-01 100.0% 32.3%
3579710 5.1.10.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed 0.59 48.0 3.85e-01 94.0% 88.6%
3960441 2003.1.5.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.58 41.0 2.70e-01 78.0% 19.2%
3709925 5.1.2.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed 0.58 50.0 3.33e-01 100.0% 69.8%
4544219 2003.1.5.151 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_23, Methyltransf_25 0.58 41.0 2.66e-01 78.0% 16.5%
4940710 3174.2.1.0 ↗ beta barrels › Ribosomal protein L14-like › Barrel domain in flagellar protein FlgA › Barrel domain in flagellar protein FlgA 0.58 42.0 3.98e-01 82.0% 83.1%
4031476 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.58 41.0 3.33e-01 78.0% 86.4%
4648495 5.1.3.48 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Gmad1 0.57 48.0 3.12e-01 100.0% 47.3%
3937247 10.13.1.1 ↗ beta sandwiches › jelly-roll › Calcium ATPase, transduction domain A › Calcium ATPase, transduction domain A › E1-E2_ATPase 0.57 43.0 3.06e-01 84.0% 77.0%
5018923 809.2.1.0 ↗ a+b two layers › BLIP-like › BT0923-like › BT0923-like 0.56 39.0 3.48e-01 74.0% 60.0%
3476178 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.56 41.0 3.19e-01 82.0% 39.2%
3300051 4.1.1.141 ↗ beta barrels › SH3 › SH3 › SH3 › PTM_DIR17_Tudor 0.56 41.0 3.70e-01 82.0% 61.3%
2664854 4.1.1.38 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L2_C 0.56 39.0 3.25e-01 78.0% 52.9%
4001172 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.55 39.0 3.54e-01 76.0% 71.4%
3678082 206.1.1.20 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr 0.55 42.0 2.29e-01 86.0% 84.7%
3968619 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.55 47.0 2.96e-01 100.0% 53.3%
3953859 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.55 37.0 3.51e-01 72.0% 84.6%
3421158 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.55 41.0 3.95e-01 84.0% 81.7%
3714009 64.1.1.14 ↗ beta meanders › WW domain-like › WW domain › WW domain › PF30846 0.55 42.0 4.29e-01 90.0% 96.0%
3850775 4.1.1.101 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_2 0.54 40.0 3.79e-01 84.0% 72.3%
3502939 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.54 37.0 3.17e-01 74.0% 61.1%
3300074 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.54 40.0 3.97e-01 84.0% 87.0%
3818428 4.1.1.66 ↗ beta barrels › SH3 › SH3 › SH3 › LBR_tudor 0.54 40.0 3.60e-01 84.0% 66.7%
3709353 64.1.1.1 ↗ beta meanders › WW domain-like › WW domain › WW domain › WW 0.53 44.0 4.48e-01 100.0% 100.0%
3324823 5.3.1.2 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-Prism II › beta-Prism II › B_lectin 0.52 41.0 3.16e-01 94.0% 99.3%
3577864 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.52 37.0 3.23e-01 78.0% 45.9%
145285 4.1.1.66 ↗ beta barrels › SH3 › SH3 › SH3 › LBR_tudor 0.51 39.0 3.60e-01 84.0% 77.3%
3390473 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.51 39.0 3.23e-01 88.0% 69.5%
3466189 206.1.1.20 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr 0.51 40.0 2.49e-01 90.0% 41.8%
4680114 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.51 36.0 3.26e-01 78.0% 72.0%
4939485 2003.6.1.5 ↗ a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › Phos_pyr_kin 0.51 40.0 2.71e-01 100.0% 41.1%
D3 high residues 306-410
PDB
Domain cluster: rep: OP381444.1__UYE91028.1__P21_00051__00051__D444-537
D4 high residues 596-768
PDB
Domain cluster: rep: JF317274.1__AEQ18751.1__X__00005__D618-749
D5 high residues 1072-1085_1318-1479
PDB
Domain cluster: rep: NC_029028.1__YP_009219993.1__AVU34_gp23__00023__D273-325_543-699
D6 medium residues 23-133
PDB
Domain cluster: rep: ON286973.1__USL84859.1__A512_215__00041__D22-106
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF18668.7 best Tail_spike_N 42.9 6.00e-11 62.2% 82.9%
D7 medium residues 439-584
PDB
D8 medium residues 883-961
PDB
Domain cluster: rep: NC_048108.1__YP_009816559.1__HOU63_gp03__00003__D131-218
CATH (35)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3eb8B01 3.10.450.460 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › EspG protein, N-terminal domain 0.73 42.0 4.72e-01 92.4% 73.8%
5e1qB01 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.71 51.0 3.43e-01 74.7% 72.7%
1lfoA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.66 45.0 3.86e-01 72.2% 58.3%
1wmiA00 3.30.2310.20 Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like 0.64 43.0 4.18e-01 88.6% 61.4%
2rcqA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.63 47.0 3.95e-01 84.8% 45.4%
1ib8A02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.62 42.0 4.54e-01 77.2% 83.6%
4exrA01 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.62 45.0 4.51e-01 84.8% 75.3%
4o9dA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.60 52.0 3.40e-01 100.0% 47.3%
1ealA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.59 43.0 3.65e-01 94.9% 48.0%
6c1zA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.59 44.0 3.74e-01 83.5% 47.1%
7szeB02 3.90.380.10 Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 0.58 48.0 3.70e-01 91.1% 54.9%
5c0pA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.58 51.0 3.54e-01 100.0% 50.4%
2v7sA00 3.30.2030.20 Alpha Beta › 2-Layer Sandwich › TBP-like › 0.58 41.0 3.23e-01 86.1% 34.3%
1yrzA02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.58 51.0 3.82e-01 100.0% 49.8%
8hpoK01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.57 49.0 3.19e-01 98.7% 39.4%
1ohfA03 2.60.270.70 Mainly Beta › Sandwich › Mutm (Fpg) Protein; Chain: A, domain 2 › 0.57 47.0 3.95e-01 92.4% 69.5%
2it9A00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.57 43.0 3.77e-01 81.0% 61.7%
1n7vA02 2.60.330.10 Mainly Beta › Sandwich › receptor-binding protein prd1-p2, domain 2 › receptor-binding protein prd1-p2, domain 2 0.57 48.0 4.16e-01 93.7% 74.8%
1t6lA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.57 43.0 3.09e-01 82.3% 47.0%
2a5zA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.56 45.0 3.26e-01 88.6% 75.7%
6i8xA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.56 45.0 3.70e-01 89.9% 52.3%
2xe4A02 2.130.10.120 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain 0.56 48.0 3.21e-01 100.0% 36.4%
3jr1A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.55 43.0 4.02e-01 84.8% 96.0%
4eqaC00 2.40.128.650 Mainly Beta › Beta Barrel › Lipocalin › 0.54 47.0 3.87e-01 100.0% 67.3%
5upiA01 2.70.98.30 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 0.53 44.0 3.45e-01 94.9% 55.9%
6n44A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.53 46.0 3.82e-01 100.0% 54.0%
3mepA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.53 45.0 3.60e-01 100.0% 59.8%
1tltA02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.53 41.0 3.13e-01 83.5% 45.2%
3cwxA00 3.40.1420.20 Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › Pathogenicity island component CagD 0.53 46.0 3.95e-01 96.2% 64.8%
5gm0A01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.52 47.0 3.79e-01 100.0% 53.4%
3ffzA04 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.51 40.0 3.17e-01 88.6% 79.2%
2avtA02 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.51 38.0 2.93e-01 82.3% 56.8%
5nldB00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.51 43.0 3.54e-01 97.5% 52.9%
2jd4A02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.50 44.0 3.47e-01 100.0% 58.5%
2x1cB01 3.60.60.10 Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › Penicillin V Acylase; Chain A 0.50 43.0 3.03e-01 100.0% 59.9%
ECOD (35)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3974671 243.19.1.0 ↗ a+b two layers › Cystatin-like › Phi ETA orf 56-like protein C-terminal domains › Phi ETA orf 56-like protein C-terminal domains 0.80 72.0 7.01e-01 94.9% 100.0%
4254206 12.3.1.22 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › GH97_N 0.71 51.0 3.43e-01 74.7% 72.7%
3293799 243.1.1.24 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › ARC6-like_IMS 0.70 49.0 3.96e-01 73.4% 88.7%
4082107 7089.1.1.3 ↗ a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › MmoD 0.67 39.0 4.14e-01 83.5% 64.3%
3690594 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.66 60.0 3.58e-01 100.0% 26.5%
5039412 5.1.4.665 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › FG-GAP_2 0.63 57.0 3.63e-01 100.0% 52.3%
3706074 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.63 57.0 3.64e-01 98.7% 36.3%
5014023 71.1.1.0 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.63 46.0 3.50e-01 78.5% 33.2%
4023269 4099.1.1.0 ↗ a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.63 43.0 3.88e-01 84.8% 50.9%
3238369 12.1.1.88 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › DUF5386 0.63 40.0 4.65e-01 73.4% 94.3%
3388479 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.62 55.0 3.58e-01 100.0% 53.2%
490 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.62 44.0 4.51e-01 83.5% 79.7%
3514491 5.1.4.242 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PEP5_VPS11_N 0.61 54.0 3.48e-01 100.0% 45.1%
3627177 5.1.4.242 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PEP5_VPS11_N 0.61 54.0 3.53e-01 100.0% 50.6%
4122483 4018.1.1.1 ↗ a+b two layers › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › FBPase 0.61 49.0 3.96e-01 88.6% 96.8%
4939066 227.1.1.6 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.60 46.0 3.95e-01 82.3% 89.1%
3611446 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.60 52.0 3.58e-01 98.7% 56.1%
3520868 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.60 49.0 4.07e-01 96.2% 50.7%
3934558 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.58 50.0 3.34e-01 100.0% 47.0%
4121572 5.1.4.14 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Peptidase_S9_N 0.58 51.0 3.34e-01 100.0% 32.7%
3666734 5.3.1.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-Prism II › beta-Prism II 0.58 41.0 3.47e-01 96.2% 45.4%
5040587 331.3.1.11 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 0.57 48.0 3.91e-01 93.7% 57.4%
165398 7515.1.1.2 ↗ a/b three-layered sandwiches › Alkaline phosphatase-like › Alkaline phosphatase-like › Alkaline phosphatase-like › Sulfatase 0.57 51.0 3.14e-01 98.7% 79.1%
3943357 274.1.1.35 ↗ a+b two layers › Pili subunits › Pili subunits › Pili subunits › DUF2509 0.57 45.0 4.45e-01 88.6% 83.5%
4015961 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.56 49.0 3.09e-01 100.0% 45.8%
3244934 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.56 40.0 2.65e-01 75.9% 23.7%
2085663 12.3.1.9 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_81 0.55 47.0 3.15e-01 100.0% 36.9%
1280992 3521.1.1.2 ↗ a+b three layers › Polymerase basic protein 2 cap-binding domain › Polymerase basic protein 2 cap-binding domain › Polymerase basic protein 2 cap-binding domain › PB2_cap-binding 0.54 46.0 3.58e-01 94.9% 45.3%
5060431 2004.1.1.198 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.54 43.0 2.88e-01 93.7% 27.6%
3482450 10.1.1.1 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_1 0.53 46.0 3.44e-01 96.2% 51.0%
3786654 243.1.1.44 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › MBA1 0.53 46.0 3.42e-01 100.0% 73.8%
2630848 10.1.1.4 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Gal-bind_lectin 0.53 46.0 3.81e-01 100.0% 54.7%
3839277 241.16.1.1 ↗ a+b two layers › Type III secretory system chaperone-like › protein CagD › protein CagD › CagD 0.52 46.0 3.75e-01 96.2% 61.4%
3200361 10.1.1.4 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Gal-bind_lectin 0.51 46.0 3.67e-01 100.0% 52.3%
3960834 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.51 42.0 3.65e-01 89.9% 67.5%
D9 medium residues 962-1054
PDB
Domain cluster: rep: OP381444.1__UYE91028.1__P21_00051__00051__D444-537
D10 medium residues 1120-1316
PDB
Domain cluster: rep: OK624832.1__UFK09600.1__X__00075__D11-163