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MT684598.1__QNN99305.1__SEA_FAUST_233__00199

Bact-Vir

MT684598.1__QNN99305.1__SEA_FAUST_233__00199

Identity

Accession:
MT684598 ↗
Kingdom:
phage

Quality

73.1 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 23-97
PDB
CATH (41)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1yvuA04 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.73 52.0 3.69e-01 74.7% 28.5%
4e19A00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.72 51.0 4.19e-01 74.7% 44.4%
2hoeA02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.69 49.0 3.92e-01 78.7% 37.7%
3u3gA00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.68 50.0 4.10e-01 78.7% 43.6%
2qm1B01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.68 47.0 3.75e-01 77.3% 36.2%
1z05A02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.67 46.0 3.67e-01 77.3% 35.1%
2nn6C00 3.30.230.70 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › GHMP Kinase, N-terminal domain 0.66 45.0 3.06e-01 70.7% 20.4%
4htlA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.64 42.0 3.85e-01 72.0% 50.0%
3a32A02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.64 47.0 3.85e-01 78.7% 83.7%
2ba1D01 3.30.230.70 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › GHMP Kinase, N-terminal domain 0.63 48.0 3.40e-01 82.7% 28.7%
7z6eA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.62 44.0 3.73e-01 74.7% 54.1%
2crfA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.62 42.0 3.52e-01 78.7% 42.4%
2f96A00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.61 45.0 3.30e-01 78.7% 93.5%
6qm7M00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.60 43.0 3.08e-01 74.7% 28.0%
4a18O00 3.30.390.110 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › 0.60 47.0 3.89e-01 84.0% 99.3%
1k5dB00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.60 44.0 3.50e-01 77.3% 40.4%
2aa4A01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.59 40.0 3.30e-01 73.3% 38.0%
3ulbA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.59 40.0 3.89e-01 74.7% 63.9%
2n8xA00 3.30.160.150 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain 0.59 49.0 3.96e-01 100.0% 54.8%
1e3hA01 3.30.230.70 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › GHMP Kinase, N-terminal domain 0.59 40.0 2.85e-01 72.0% 28.2%
2z0uA00 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.57 43.0 3.64e-01 81.3% 71.1%
2wanA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 42.0 3.81e-01 78.7% 97.1%
3q9oA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.57 41.0 2.96e-01 76.0% 60.6%
2w40A01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.57 45.0 3.09e-01 84.0% 24.8%
5nckA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.57 37.0 3.39e-01 78.7% 48.6%
2cm5A00 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.57 42.0 3.47e-01 81.3% 61.5%
4pj2A00 2.40.128.460 Mainly Beta › Beta Barrel › Lipocalin › Periplasmic lysozyme inhibitor of I-type lysozyme 0.56 40.0 3.48e-01 77.3% 70.2%
3fdwA00 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.56 42.0 3.51e-01 81.3% 70.8%
4aefA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 41.0 3.85e-01 80.0% 78.9%
3ijtB00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.55 40.0 3.35e-01 80.0% 99.3%
2zkmX01 2.30.29.240 Mainly Beta › Roll › PH-domain like › 0.55 41.0 3.05e-01 81.3% 38.3%
4ohxA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.54 39.0 2.84e-01 78.7% 31.6%
2w1nA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 38.0 3.79e-01 77.3% 85.4%
6ecaA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 38.0 3.63e-01 78.7% 83.2%
7y8sB03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 37.0 3.65e-01 76.0% 85.7%
4hd5A01 2.60.40.3760 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 38.0 3.59e-01 80.0% 83.5%
2kt9A01 3.30.390.140 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › 0.52 40.0 3.67e-01 82.7% 66.7%
2w91A03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 36.0 3.30e-01 74.7% 77.7%
2nq3A00 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.51 35.0 2.99e-01 73.3% 69.5%
3mn8B02 2.60.40.1120 Mainly Beta › Sandwich › Immunoglobulin-like › Carboxypeptidase-like, regulatory domain 0.50 36.0 3.56e-01 77.3% 79.5%
3ijcA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.50 36.0 2.37e-01 77.3% 20.7%
ECOD (63)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3278013 2484.1.1.8 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › ROK 0.74 52.0 4.30e-01 78.7% 42.3%
3334247 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.74 52.0 4.59e-01 74.7% 60.0%
3375711 2484.1.1.67 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 0.73 52.0 4.90e-01 74.7% 66.7%
3355734 2484.1.1.67 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 0.73 52.0 4.59e-01 74.7% 51.9%
4947486 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.73 52.0 4.26e-01 74.7% 45.9%
3838085 7503.1.1.11 a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › HP1454-like_C 0.73 52.0 4.75e-01 76.0% 61.0%
4033690 2484.1.1.8 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › ROK 0.73 51.0 4.45e-01 74.7% 50.0%
3622016 2484.5.1.6 mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › Peptidase_A17 0.71 54.0 4.80e-01 80.0% 60.0%
3679402 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.71 51.0 3.95e-01 74.7% 43.1%
4975569 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.71 50.0 4.20e-01 80.0% 44.0%
3351393 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.71 50.0 4.67e-01 74.7% 70.5%
3464233 2484.1.1.67 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 0.71 50.0 4.96e-01 74.7% 75.0%
3337433 2484.1.1.67 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 0.71 52.0 5.09e-01 77.3% 75.0%
3351473 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.70 51.0 5.06e-01 77.3% 75.0%
3366565 2484.1.1.67 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 0.70 50.0 4.41e-01 74.7% 53.6%
4319373 2484.1.1.8 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › ROK 0.70 49.0 4.28e-01 74.7% 50.0%
3810495 2484.1.1.67 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 0.70 49.0 4.50e-01 74.7% 60.0%
5073213 2484.1.1.302 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB 0.69 48.0 3.41e-01 72.0% 69.5%
3290713 2484.1.1.8 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › ROK 0.69 50.0 3.84e-01 78.7% 35.6%
3814983 2484.1.1.67 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 0.68 49.0 4.91e-01 74.7% 80.0%
3945182 2484.1.1.8 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › ROK 0.68 46.0 4.16e-01 74.7% 50.5%
3311932 2484.1.1.67 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 0.68 50.0 5.01e-01 77.3% 81.3%
1149912 2484.1.1.8 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › ROK 0.68 47.0 4.01e-01 77.3% 43.9%
5078265 2484.1.1.6 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FGGY_N 0.68 48.0 3.32e-01 78.7% 22.9%
3355790 2484.1.1.67 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 0.68 49.0 4.05e-01 76.0% 45.5%
3975175 2484.1.1.8 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › ROK 0.68 46.0 3.96e-01 74.7% 44.2%
3786015 5.1.5.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 0.67 41.0 2.34e-01 80.0% 6.5%
4031599 101.1.2.584 alpha arrays › HTH › HTH › winged helix domain › HrcA 0.67 45.0 4.23e-01 70.7% 55.8%
4325844 5085.1.1.2 a+b duplicates or obligate multimers › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › PF27489, PF29296 0.66 48.0 2.90e-01 74.7% 47.1%
3977273 2484.1.1.8 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › ROK 0.66 43.0 3.57e-01 73.3% 36.4%
4072334 218.1.1.8 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.66 46.0 4.24e-01 77.3% 56.0%
3955898 2484.1.1.8 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › ROK 0.65 45.0 4.04e-01 74.7% 51.4%
4083184 218.1.1.8 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.65 46.0 4.20e-01 74.7% 93.0%
3778135 220.1.1.66 beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH 0.65 47.0 3.68e-01 80.0% 38.0%
4517494 2484.1.1.8 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › ROK 0.64 41.0 3.50e-01 72.0% 38.5%
3957119 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.63 44.0 3.23e-01 74.7% 27.1%
4036940 218.1.1.8 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.63 44.0 4.07e-01 72.0% 87.4%
3925388 245.1.1.0 a+b two layers › Ribonuclease PH domain 2-like › Ribonuclease PH domain 2 › Ribonuclease PH domain 2 0.63 44.0 4.21e-01 73.3% 65.2%
4049598 218.1.1.8 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.63 42.0 3.93e-01 70.7% 91.0%
4303869 218.1.1.8 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.62 42.0 4.04e-01 70.7% 58.9%
3236855 220.1.1.4 beta barrels › PH domain-like › PH domain-like › PH domain-like › Ran_BP1 0.62 49.0 3.86e-01 85.3% 42.0%
4297175 218.1.1.8 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.62 44.0 4.20e-01 76.0% 63.3%
3796820 245.1.1.0 a+b two layers › Ribonuclease PH domain 2-like › Ribonuclease PH domain 2 › Ribonuclease PH domain 2 0.61 43.0 4.15e-01 73.3% 68.2%
4304836 2484.1.1.8 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › ROK 0.61 41.0 3.32e-01 77.3% 34.2%
4548716 218.1.1.8 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.61 41.0 3.80e-01 70.7% 58.0%
3979131 2484.1.1.8 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › ROK 0.61 42.0 3.34e-01 73.3% 34.5%
3948814 4312.1.1.4 a+b two layers › RelE-like › RelE-like › RelE-like › Gp49 0.61 42.0 3.84e-01 76.0% 52.4%
3523477 220.1.1.66 beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH 0.60 49.0 3.66e-01 88.0% 35.7%
3236478 11.2.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.60 46.0 3.69e-01 82.7% 61.1%
3927497 2484.5.1.3 mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH_2 0.60 42.0 4.15e-01 74.7% 76.2%
4073485 218.1.1.8 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.60 42.0 3.85e-01 76.0% 91.4%
4232558 218.1.1.8 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.59 42.0 3.91e-01 76.0% 57.0%
3623113 245.1.1.1 a+b two layers › Ribonuclease PH domain 2-like › Ribonuclease PH domain 2 › Ribonuclease PH domain 2 › RNase_PH_C 0.59 42.0 4.08e-01 77.3% 67.1%
3487326 220.1.1.5 beta barrels › PH domain-like › PH domain-like › PH domain-like › PID 0.59 42.0 4.47e-01 76.0% 86.2%
3476051 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.58 36.0 2.90e-01 70.7% 32.4%
4930080 245.1.1.1 a+b two layers › Ribonuclease PH domain 2-like › Ribonuclease PH domain 2 › Ribonuclease PH domain 2 › RNase_PH_C 0.56 43.0 4.19e-01 78.7% 88.7%
3752710 206.1.3.12 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › TTL 0.55 40.0 2.78e-01 76.0% 42.4%
5033562 245.1.1.1 a+b two layers › Ribonuclease PH domain 2-like › Ribonuclease PH domain 2 › Ribonuclease PH domain 2 › RNase_PH_C 0.54 42.0 4.10e-01 81.3% 88.7%
2388639 245.1.1.1 a+b two layers › Ribonuclease PH domain 2-like › Ribonuclease PH domain 2 › Ribonuclease PH domain 2 › RNase_PH_C 0.53 46.0 4.22e-01 97.3% 84.8%
4286279 206.1.3.55 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › TTL, ATPgrasp_YheCD 0.52 40.0 2.52e-01 82.7% 16.1%
5022868 244.4.1.2 a+b two layers › FAD-linked reductases, C-terminal domain-like › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › NiFeSe_Hases 0.52 39.0 3.76e-01 88.0% 70.5%
3615104 245.1.1.1 a+b two layers › Ribonuclease PH domain 2-like › Ribonuclease PH domain 2 › Ribonuclease PH domain 2 › RNase_PH_C 0.51 45.0 4.18e-01 98.7% 89.5%
3519618 109.21.1.4 alpha superhelices › Repetitive alpha hairpins › Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain › Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain › Sec16_C,Sec16 0.50 37.0 2.29e-01 78.7% 41.1%