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MT684599.1__QNN99425.1__SEA_SEPHIROTH_85__00085
Bact-VirMT684599.1__QNN99425.1__SEA_SEPHIROTH_85__00085
Identity
- Accession:
- MT684599 ↗
- Kingdom:
- phage
Quality
65.8
mean pLDDT
Taxonomy
TaxID: 2767553
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 46-112
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3q8dA02 | 1.20.1440.120 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Recombination protein O, C-terminal domain | 0.69 | 47.0 | 3.52e-01 | 86.6% | 30.5% |
| 3lrqB00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.65 | 50.0 | 4.73e-01 | 83.6% | 78.8% |
| 3ztgA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.64 | 50.0 | 4.51e-01 | 85.1% | 70.7% |
| 1ileA02 | 3.90.740.10 | Alpha Beta › Alpha-Beta Complex › Isoleucyl-tRNA Synthetase; domain 2 › Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain | 0.62 | 50.0 | 3.66e-01 | 91.0% | 42.6% |
| 2cklB01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.62 | 47.0 | 4.68e-01 | 85.1% | 90.1% |
| 4uf0A03 | 2.10.110.20 | Mainly Beta › Ribbon › Cysteine Rich Protein › | 0.59 | 42.0 | 4.30e-01 | 77.6% | 78.5% |
| 3ihpA01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.58 | 44.0 | 3.81e-01 | 86.6% | 79.3% |
| 5dinA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.58 | 44.0 | 3.70e-01 | 83.6% | 53.3% |
| 4fo9A02 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.57 | 43.0 | 3.66e-01 | 83.6% | 70.1% |
| 2idaA01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.56 | 41.0 | 3.83e-01 | 80.6% | 64.8% |
| 3foaB01 | 3.40.50.11780 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.54 | 44.0 | 3.14e-01 | 94.0% | 86.8% |
| 3m3gA00 | 2.40.40.10 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain | 0.50 | 34.0 | 2.93e-01 | 70.1% | 64.2% |
ECOD (75)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4581802 | 377.1.1.11 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › RecO_C | 0.77 | 53.0 | 3.91e-01 | 86.6% | 29.1% |
| 4280250 | 377.1.1.11 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › RecO_C | 0.75 | 52.0 | 3.82e-01 | 86.6% | 29.1% |
| 4463023 | 377.1.1.11 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › RecO_C | 0.75 | 55.0 | 4.04e-01 | 86.6% | 30.6% |
| 3859342 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.74 | 50.0 | 5.30e-01 | 76.1% | 78.3% |
| 4297182 | 377.1.1.11 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › RecO_C | 0.72 | 50.0 | 3.68e-01 | 86.6% | 28.2% |
| 1835651 | 377.1.1.5 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM | 0.71 | 48.0 | 4.83e-01 | 83.6% | 70.1% |
| 4085235 | 377.1.1.11 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › RecO_C | 0.70 | 47.0 | 3.55e-01 | 86.6% | 30.3% |
| 4152848 | 377.1.1.11 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › RecO_C | 0.70 | 47.0 | 3.58e-01 | 86.6% | 31.3% |
| 3489181 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.69 | 45.0 | 4.43e-01 | 71.6% | 62.9% |
| 4670187 | 377.1.1.11 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › RecO_C | 0.69 | 47.0 | 3.56e-01 | 86.6% | 29.1% |
| 4322209 | 377.1.1.11 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › RecO_C | 0.69 | 49.0 | 3.69e-01 | 85.1% | 30.9% |
| 5076810 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.69 | 49.0 | 5.04e-01 | 74.6% | 95.2% |
| 4946824 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.68 | 49.0 | 3.42e-01 | 76.1% | 26.8% |
| 3503883 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.68 | 41.0 | 4.90e-01 | 73.1% | 100.0% |
| 3547416 | 376.1.3.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › FYVE_CARP1-2 | 0.68 | 42.0 | 4.50e-01 | 71.6% | 74.5% |
| 4602865 | 377.1.1.11 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › RecO_C | 0.68 | 48.0 | 3.66e-01 | 86.6% | 31.2% |
| 3998594 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.68 | 50.0 | 4.85e-01 | 79.1% | 81.3% |
| 4377367 | 377.1.1.11 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › RecO_C | 0.67 | 47.0 | 3.58e-01 | 86.6% | 30.3% |
| 4662977 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.67 | 48.0 | 3.62e-01 | 86.6% | 32.3% |
| 3431728 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.67 | 49.0 | 5.25e-01 | 79.1% | 96.4% |
| 4946420 | 376.1.1.180 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › ResIII | 0.67 | 51.0 | 5.20e-01 | 83.6% | 98.5% |
| 3936791 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.66 | 50.0 | 4.65e-01 | 82.1% | 81.2% |
| 3592438 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.66 | 41.0 | 3.61e-01 | 71.6% | 42.0% |
| 4975593 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.66 | 51.0 | 4.72e-01 | 83.6% | 81.2% |
| 3622838 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.66 | 50.0 | 4.45e-01 | 82.1% | 81.1% |
| 3809803 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.65 | 50.0 | 5.06e-01 | 82.1% | 95.4% |
| 3430914 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.65 | 50.0 | 5.09e-01 | 83.6% | 84.6% |
| 3597323 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.65 | 44.0 | 4.26e-01 | 70.1% | 64.0% |
| 3365955 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.65 | 49.0 | 4.90e-01 | 82.1% | 90.0% |
| 3704117 | 376.1.3.3 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › FYVE | 0.64 | 43.0 | 4.18e-01 | 70.1% | 64.0% |
| 3922987 | 376.1.3.3 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › FYVE | 0.64 | 43.0 | 4.38e-01 | 70.1% | 73.8% |
| 3395303 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.64 | 46.0 | 4.49e-01 | 77.6% | 84.0% |
| 5074188 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.64 | 45.0 | 4.50e-01 | 74.6% | 88.4% |
| 3706822 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.64 | 45.0 | 4.89e-01 | 77.6% | 90.9% |
| 4026243 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.63 | 49.0 | 4.17e-01 | 83.6% | 76.4% |
| 3039880 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.63 | 47.0 | 4.81e-01 | 80.6% | 96.9% |
| 3370659 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.63 | 48.0 | 3.66e-01 | 82.1% | 63.9% |
| 3599415 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.63 | 43.0 | 4.24e-01 | 70.1% | 71.4% |
| 3668295 | 376.1.1.15 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-Nse | 0.63 | 48.0 | 4.48e-01 | 83.6% | 84.7% |
| 3292736 | 376.1.3.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › PHD | 0.63 | 43.0 | 4.50e-01 | 71.6% | 78.3% |
| 4977742 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.63 | 47.0 | 4.43e-01 | 82.1% | 71.8% |
| 3439077 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.63 | 44.0 | 3.95e-01 | 77.6% | 52.6% |
| None | — | 0.63 | 47.0 | 3.52e-01 | 80.6% | 33.9% | |
| 3787867 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.62 | 44.0 | 3.59e-01 | 74.6% | 64.6% |
| 3788677 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.62 | 45.0 | 4.64e-01 | 79.1% | 92.3% |
| 3224677 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.62 | 43.0 | 4.47e-01 | 71.6% | 85.0% |
| 3242100 | 376.1.5.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › AN1-like Zinc finger | 0.62 | 43.0 | 4.61e-01 | 82.1% | 89.1% |
| 3808262 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.61 | 42.0 | 3.59e-01 | 70.1% | 48.6% |
| 3739083 | 376.1.3.3 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › FYVE | 0.61 | 42.0 | 4.06e-01 | 71.6% | 65.3% |
| 3621780 | 376.1.1.27 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_5 | 0.61 | 47.0 | 4.44e-01 | 83.6% | 80.0% |
| 3427984 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.61 | 43.0 | 3.84e-01 | 76.1% | 52.6% |
| 3467876 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.60 | 41.0 | 3.58e-01 | 70.1% | 55.0% |
| 3954764 | 316.1.1.68 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › PF28438 | 0.60 | 44.0 | 4.30e-01 | 83.6% | 70.7% |
| 2714469 | 376.1.3.3 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › FYVE | 0.60 | 43.0 | 4.16e-01 | 77.6% | 66.7% |
| 3212037 | 376.1.1.61 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › Rtf2 | 0.59 | 43.0 | 4.29e-01 | 77.6% | 81.4% |
| 3388609 | 376.1.3.3 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › FYVE | 0.59 | 42.0 | 3.35e-01 | 76.1% | 80.0% |
| 3226103 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.59 | 45.0 | 4.03e-01 | 83.6% | 96.9% |
| 3740227 | 376.1.3.3 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › FYVE | 0.59 | 40.0 | 3.98e-01 | 70.1% | 67.1% |
| 3506139 | 376.1.3.3 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › FYVE | 0.59 | 44.0 | 4.03e-01 | 80.6% | 98.9% |
| 3782443 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.59 | 42.0 | 3.23e-01 | 77.6% | 35.8% |
| 3858618 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.58 | 44.0 | 4.18e-01 | 83.6% | 93.8% |
| 3607253 | 376.1.3.3 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › FYVE | 0.58 | 41.0 | 3.79e-01 | 74.6% | 69.4% |
| 4295284 | 1077.1.1.1 ↗ | few secondary structure elements › RelA zinc-finger domain › RelA zinc-finger domain › RelA zinc-finger domain › RelA_RIS | 0.57 | 44.0 | 4.26e-01 | 83.6% | 74.7% |
| 4222731 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.57 | 44.0 | 4.16e-01 | 83.6% | 82.5% |
| 4304329 | 376.1.1.32 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-UBP_var | 0.57 | 44.0 | 3.76e-01 | 86.6% | 79.5% |
| 3524983 | 376.1.1.72 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › EHMT1-2_CRR | 0.57 | 44.0 | 3.90e-01 | 88.1% | 74.3% |
| 3664051 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.56 | 39.0 | 3.53e-01 | 73.1% | 78.9% |
| 3405724 | 376.1.1.32 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-UBP_var | 0.56 | 43.0 | 3.69e-01 | 88.1% | 75.0% |
| 4025773 | 376.1.1.32 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-UBP_var | 0.55 | 43.0 | 3.70e-01 | 88.1% | 56.5% |
| 3171691 | 376.1.3.3 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › FYVE | 0.54 | 43.0 | 3.43e-01 | 88.1% | 87.9% |
| 3865964 | 376.1.3.3 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › FYVE | 0.54 | 43.0 | 3.83e-01 | 86.6% | 83.2% |
| 3880702 | 109.3.1.241 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › FYVE | 0.54 | 43.0 | 3.30e-01 | 88.1% | 43.2% |
| 3907189 | 376.1.3.3 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › FYVE | 0.53 | 40.0 | 3.64e-01 | 83.6% | 81.1% |
| 3928425 | 376.1.3.3 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › FYVE | 0.52 | 41.0 | 3.84e-01 | 86.6% | 74.1% |
| 3259159 | 284.1.1.5 ↗ | a+b two layers › FKBP-like › FKBP-like › FKBP-like › Gcd10p | 0.52 | 39.0 | 3.01e-01 | 82.1% | 81.9% |