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MT700412.1__QNI20428.1__X__00074
Bact-VirMT700412.1__QNI20428.1__X__00074
Identity
- Accession:
- MT700412 ↗
- Kingdom:
- phage
Quality
83.2
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Ehrlichviridae›
Suttonboningtonvirus›
Bacillus_phage_1_ICo-2020
TaxID: 2759272
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 3-91
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13392.13 best | HNH_3 | 38.1 | 1.20e-09 | 51.7% | 93.5% |
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1a73A00 | 3.90.75.10 | Alpha Beta › Alpha-Beta Complex › Homing Intron 3 (I-Ppo) Encoded Endonuclease; Chain A › Homing Intron 3 (I-ppo) Encoded Endonuclease; Chain A | 0.65 | 59.0 | 4.82e-01 | 100.0% | 82.1% |
| 4oxwA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.54 | 36.0 | 3.39e-01 | 79.8% | 56.6% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3266965 | 378.1.2.2 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › Inactive Tox-GHH domain of teneurin › HNH_3 | 0.80 | 57.0 | 6.56e-01 | 88.8% | 100.0% |
| 3586841 | 378.1.1.7 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › NUMOD4,HNH_3 | 0.70 | 64.0 | 5.84e-01 | 100.0% | 90.4% |
| 3676791 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.62 | 34.0 | 3.65e-01 | 79.8% | 61.3% |
| 4303143 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.61 | 39.0 | 3.98e-01 | 82.0% | 67.1% |
| 3422764 | 4.1.1.313 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF7912 | 0.56 | 30.0 | 3.77e-01 | 74.2% | 90.0% |
| 3575776 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.54 | 29.0 | 3.53e-01 | 76.4% | 90.0% |
| 3626487 | 101.1.2.194 ↗ | alpha arrays › HTH › HTH › winged helix domain › RIOX1_C_WH | 0.54 | 36.0 | 3.27e-01 | 88.8% | 49.6% |
| 4002681 | 377.1.2.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › PARP-type zinc finger | 0.53 | 41.0 | 4.10e-01 | 82.0% | 92.2% |
| 3712769 | 101.1.2.194 ↗ | alpha arrays › HTH › HTH › winged helix domain › RIOX1_C_WH | 0.53 | 38.0 | 3.49e-01 | 92.1% | 55.8% |
| 3870848 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 42.0 | 2.74e-01 | 88.8% | 27.0% |
| 3640540 | 5.1.4.97 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Rrn6_beta-prop | 0.52 | 41.0 | 2.70e-01 | 91.0% | 70.7% |
| 3395156 | 377.1.2.1 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › PARP-type zinc finger › zf-PARP | 0.51 | 39.0 | 3.57e-01 | 80.9% | 75.7% |
| 4299669 | 101.1.2.194 ↗ | alpha arrays › HTH › HTH › winged helix domain › RIOX1_C_WH | 0.50 | 36.0 | 3.41e-01 | 88.8% | 62.0% |
D2
medium
residues 107-148
Domain cluster:
representative
CATH (76)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6v7xB02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.87 | 68.0 | 6.16e-01 | 85.7% | 64.3% |
| 3ulqB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.87 | 70.0 | 6.25e-01 | 88.1% | 63.8% |
| 3vfzB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.86 | 68.0 | 5.95e-01 | 88.1% | 60.3% |
| 3p7nA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.85 | 67.0 | 5.59e-01 | 88.1% | 51.4% |
| 5f64A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.84 | 66.0 | 5.45e-01 | 88.1% | 49.3% |
| 5fgmA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.83 | 66.0 | 5.70e-01 | 88.1% | 58.5% |
| 1a04A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.83 | 65.0 | 5.25e-01 | 88.1% | 46.3% |
| 1fc3B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.83 | 67.0 | 4.96e-01 | 88.1% | 49.5% |
| 6cc0A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.82 | 64.0 | 5.46e-01 | 88.1% | 52.9% |
| 3op9A01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.81 | 62.0 | 5.16e-01 | 81.0% | 52.9% |
| 4go1A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.81 | 70.0 | 6.46e-01 | 100.0% | 81.5% |
| 2llkA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.80 | 66.0 | 6.70e-01 | 92.9% | 97.6% |
| 2r1jL00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.80 | 59.0 | 5.02e-01 | 78.6% | 50.0% |
| 3iuoA00 | 1.10.10.1390 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › ATP-dependent DNA helicase RecQ | 0.80 | 71.0 | 5.16e-01 | 100.0% | 41.3% |
| 3f8mA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.79 | 70.0 | 6.05e-01 | 100.0% | 69.2% |
| 2pmiB00 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.78 | 68.0 | 4.25e-01 | 97.6% | 44.1% |
| 2rn7A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.78 | 66.0 | 5.72e-01 | 97.6% | 71.2% |
| 6s6hA01 | 1.10.10.2830 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.78 | 65.0 | 4.75e-01 | 92.9% | 41.3% |
| 1gdtB03 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.78 | 66.0 | 6.48e-01 | 95.2% | 88.9% |
| 2elhA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.78 | 64.0 | 5.61e-01 | 95.2% | 60.6% |
| 8dtqA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.78 | 59.0 | 4.66e-01 | 81.0% | 43.9% |
| 1aisB02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.78 | 67.0 | 5.14e-01 | 97.6% | 46.8% |
| 2x48A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.78 | 68.0 | 6.29e-01 | 100.0% | 100.0% |
| 4u7bA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.78 | 62.0 | 6.44e-01 | 90.5% | 94.9% |
| 2r0qC02 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.78 | 64.0 | 5.93e-01 | 95.2% | 87.3% |
| 4pu7A00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.77 | 58.0 | 4.84e-01 | 81.0% | 49.3% |
| 2dbbB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.77 | 65.0 | 5.91e-01 | 95.2% | 70.9% |
| 4a0zA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.77 | 64.0 | 5.79e-01 | 95.2% | 71.2% |
| 3t0yA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.77 | 60.0 | 5.39e-01 | 88.1% | 61.7% |
| 2bnmA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.77 | 57.0 | 4.73e-01 | 81.0% | 48.6% |
| 1y7yA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.76 | 57.0 | 4.80e-01 | 81.0% | 50.7% |
| 1r71A01 | 1.10.10.730 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › KorB DNA-binding domain | 0.76 | 66.0 | 6.03e-01 | 100.0% | 78.6% |
| 1k78A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.76 | 66.0 | 5.71e-01 | 100.0% | 83.3% |
| 3cecA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.75 | 58.0 | 4.48e-01 | 83.3% | 39.6% |
| 2a6cA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.75 | 57.0 | 4.71e-01 | 88.1% | 46.1% |
| 1lliA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.75 | 57.0 | 4.35e-01 | 81.0% | 43.8% |
| 2lvsA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.75 | 60.0 | 5.58e-01 | 92.9% | 69.6% |
| 1c9bA02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.75 | 62.0 | 4.70e-01 | 97.6% | 40.6% |
| 2fmyA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 64.0 | 5.13e-01 | 97.6% | 65.9% |
| 1j5yA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 63.0 | 5.51e-01 | 97.6% | 65.6% |
| 2cfxA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 60.0 | 5.70e-01 | 95.2% | 78.0% |
| 4izzB02 | 1.10.10.1680 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › HetR, N-terminal DNA-binding domain | 0.73 | 60.0 | 5.21e-01 | 95.2% | 61.8% |
| 5cvrA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 61.0 | 4.89e-01 | 95.2% | 63.1% |
| 4jp0A03 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.73 | 52.0 | 5.43e-01 | 92.9% | 100.0% |
| 4i2oA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 65.0 | 5.22e-01 | 100.0% | 61.3% |
| 4ybaA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.73 | 56.0 | 4.64e-01 | 85.7% | 49.4% |
| 3iwfB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 63.0 | 4.97e-01 | 100.0% | 47.2% |
| 4nvsA00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.72 | 57.0 | 3.93e-01 | 92.9% | 36.1% |
| 7pzaA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 62.0 | 4.96e-01 | 100.0% | 67.4% |
| 6sdkA01 | 1.10.10.2830 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.72 | 55.0 | 4.34e-01 | 88.1% | 40.2% |
| 1hw1A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 60.0 | 5.07e-01 | 100.0% | 64.0% |
| 2l1pA00 | 1.10.260.70 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › SATB, CULT domain | 0.71 | 58.0 | 4.68e-01 | 92.9% | 47.0% |
| 1l0oC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 60.0 | 5.40e-01 | 95.2% | 80.7% |
| 2dt5B01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 60.0 | 5.00e-01 | 95.2% | 63.0% |
| 4rocA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.70 | 56.0 | 4.43e-01 | 100.0% | 43.7% |
| 4ivnA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 59.0 | 4.96e-01 | 100.0% | 55.3% |
| 2f2cA02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.69 | 57.0 | 4.35e-01 | 97.6% | 46.2% |
| 6f8hC00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.69 | 53.0 | 4.16e-01 | 85.7% | 39.8% |
| 4kmfA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 57.0 | 5.11e-01 | 97.6% | 66.1% |
| 3g3zA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 54.0 | 4.79e-01 | 95.2% | 60.9% |
| 1rr7A02 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.68 | 52.0 | 5.10e-01 | 92.9% | 79.2% |
| 4gqmA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.68 | 48.0 | 3.73e-01 | 81.0% | 33.3% |
| 2o38A01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.67 | 52.0 | 4.58e-01 | 88.1% | 60.0% |
| 3k69A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 55.0 | 3.85e-01 | 97.6% | 28.7% |
| 4d7kA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 52.0 | 4.08e-01 | 88.1% | 39.6% |
| 2xubA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 52.0 | 4.39e-01 | 95.2% | 48.7% |
| 7n1nB01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.67 | 52.0 | 4.62e-01 | 88.1% | 61.9% |
| 7vjmB01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.67 | 51.0 | 4.50e-01 | 85.7% | 70.3% |
| 3sdgA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.66 | 51.0 | 5.14e-01 | 85.7% | 97.6% |
| 2k9lA00 | 1.10.10.1330 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › RNA polymerase sigma-54 factor, core-binding domain | 0.66 | 56.0 | 4.69e-01 | 100.0% | 56.6% |
| 3lstA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 53.0 | 4.28e-01 | 92.9% | 45.3% |
| 2dk5A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 51.0 | 4.60e-01 | 95.2% | 62.1% |
| 1k6yA01 | 1.10.10.200 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Integrase, N-terminal zinc-binding domain | 0.65 | 51.0 | 5.05e-01 | 100.0% | 87.0% |
| 3r4kB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 53.0 | 4.74e-01 | 97.6% | 66.7% |
| 3c07B00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.63 | 53.0 | 3.42e-01 | 97.6% | 22.9% |
| 3ckyA02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.61 | 49.0 | 3.61e-01 | 97.6% | 79.9% |
ECOD (91)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4963466 | 101.1.1.368 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_58 | 0.98 | 84.0 | 8.21e-01 | 90.5% | 84.4% |
| 3706139 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.95 | 77.0 | 7.26e-01 | 88.1% | 78.0% |
| 4987929 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.91 | 75.0 | 6.52e-01 | 88.1% | 61.7% |
| 4304880 | 101.1.1.31 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 | 0.90 | 73.0 | 6.05e-01 | 88.1% | 52.9% |
| 4938253 | 101.1.1.9 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_3 | 0.89 | 68.0 | 6.93e-01 | 81.0% | 87.5% |
| 5024511 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.88 | 77.0 | 7.25e-01 | 100.0% | 82.0% |
| 5012097 | 101.1.6.0 ↗ | alpha arrays › HTH › HTH › TrpR | 0.87 | 76.0 | 5.54e-01 | 95.2% | 41.0% |
| 5002776 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.87 | 72.0 | 5.82e-01 | 92.9% | 48.8% |
| 4097443 | 101.1.1.30 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 | 0.87 | 70.0 | 4.55e-01 | 88.1% | 23.5% |
| 3890615 | 101.1.1.17 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 | 0.87 | 72.0 | 6.85e-01 | 100.0% | 78.0% |
| 3590546 | 101.1.1.17 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 | 0.87 | 77.0 | 7.04e-01 | 97.6% | 77.8% |
| 3286325 | 101.1.4.72 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › Sigma70_r4 | 0.87 | 70.0 | 5.60e-01 | 88.1% | 47.5% |
| 4008322 | 101.1.1.17 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 | 0.86 | 76.0 | 6.90e-01 | 100.0% | 74.5% |
| 4334657 | 101.1.1.60 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 | 0.85 | 72.0 | 7.13e-01 | 97.6% | 88.9% |
| 3589359 | 101.1.1.68 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_38 | 0.85 | 73.0 | 7.44e-01 | 97.6% | 100.0% |
| 4198219 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.85 | 72.0 | 7.08e-01 | 97.6% | 88.9% |
| 5057202 | 101.1.3.8 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › Sigma70_r4_2 | 0.85 | 71.0 | 5.97e-01 | 92.9% | 57.1% |
| 5011648 | 101.1.1.368 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_58 | 0.85 | 77.0 | 7.22e-01 | 100.0% | 88.0% |
| 3988724 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.83 | 73.0 | 6.49e-01 | 100.0% | 73.3% |
| 3693312 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.83 | 70.0 | 6.25e-01 | 95.2% | 68.3% |
| 3409145 | 101.1.1.24 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N | 0.82 | 67.0 | 6.40e-01 | 92.9% | 78.0% |
| 1731538 | 101.1.1.25 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › DUF433 | 0.82 | 70.0 | 4.87e-01 | 97.6% | 30.4% |
| 4197050 | 101.1.6.4 ↗ | alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C | 0.82 | 72.0 | 5.34e-01 | 100.0% | 43.8% |
| 3287536 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.82 | 70.0 | 6.88e-01 | 97.6% | 91.1% |
| 4952035 | 101.1.1.17 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 | 0.81 | 70.0 | 6.23e-01 | 100.0% | 68.3% |
| 4054648 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.81 | 68.0 | 6.27e-01 | 95.2% | 76.4% |
| 3180778 | 101.1.1.24 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N | 0.81 | 72.0 | 6.22e-01 | 100.0% | 66.2% |
| 4973961 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.81 | 72.0 | 5.45e-01 | 100.0% | 46.3% |
| 4967690 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.80 | 66.0 | 6.23e-01 | 92.9% | 76.0% |
| 3945880 | 101.1.1.60 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 | 0.80 | 68.0 | 6.29e-01 | 97.6% | 76.4% |
| 4952807 | 101.1.1.60 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 | 0.80 | 66.0 | 5.53e-01 | 95.2% | 56.0% |
| 3857628 | 101.1.3.29 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › CENP-B_N | 0.80 | 67.0 | 5.85e-01 | 100.0% | 63.1% |
| 3989075 | 101.1.3.11 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_Tnp_ISL3 | 0.79 | 64.0 | 6.61e-01 | 95.2% | 100.0% |
| 4977345 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.79 | 64.0 | 4.85e-01 | 88.1% | 40.0% |
| 4031116 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.79 | 65.0 | 5.87e-01 | 97.6% | 66.7% |
| 3278077 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.79 | 65.0 | 5.83e-01 | 92.9% | 66.7% |
| 3286027 | 101.1.2.140 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_AsnC-type | 0.79 | 66.0 | 5.85e-01 | 95.2% | 65.0% |
| 2886105 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.79 | 67.0 | 6.42e-01 | 100.0% | 81.6% |
| 4173484 | 148.1.2.1 ↗ | alpha arrays › Histone-like › Histone-related › double Clp-N › Clp_N | 0.79 | 68.0 | 4.21e-01 | 95.2% | 59.5% |
| 5051680 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.79 | 66.0 | 5.35e-01 | 95.2% | 52.5% |
| 3272419 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.79 | 66.0 | 6.27e-01 | 97.6% | 80.0% |
| 5031306 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.79 | 65.0 | 5.97e-01 | 95.2% | 70.9% |
| 4612394 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.79 | 67.0 | 5.27e-01 | 97.6% | 48.3% |
| 5058606 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.78 | 64.0 | 5.32e-01 | 95.2% | 52.0% |
| 3879118 | 101.1.1.60 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 | 0.78 | 65.0 | 6.01e-01 | 95.2% | 72.7% |
| 3059487 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.78 | 59.0 | 4.59e-01 | 81.0% | 41.9% |
| 3210747 | 101.1.1.60 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 | 0.78 | 64.0 | 6.36e-01 | 97.6% | 88.9% |
| 4460997 | 101.1.1.63 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 | 0.77 | 61.0 | 5.98e-01 | 95.2% | 82.2% |
| 4975718 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.77 | 60.0 | 4.88e-01 | 83.3% | 48.0% |
| 5046294 | 101.1.2.140 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_AsnC-type | 0.77 | 63.0 | 5.84e-01 | 95.2% | 70.9% |
| 3942571 | 101.1.1.198 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › KorB | 0.77 | 68.0 | 5.88e-01 | 100.0% | 73.8% |
| 3929142 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.77 | 64.0 | 5.75e-01 | 95.2% | 70.0% |
| 3735470 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.77 | 65.0 | 5.73e-01 | 100.0% | 72.3% |
| 3565285 | 101.1.1.24 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N | 0.77 | 64.0 | 5.68e-01 | 100.0% | 64.6% |
| 3066183 | 101.1.1.17 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 | 0.76 | 61.0 | 4.68e-01 | 97.6% | 38.1% |
| 5046761 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.76 | 62.0 | 5.58e-01 | 95.2% | 65.0% |
| 3955613 | 138.1.1.9 ↗ | alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA_pol3_delta_C | 0.76 | 59.0 | 4.20e-01 | 100.0% | 28.8% |
| 3670113 | 101.1.1.129 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_4 | 0.76 | 66.0 | 5.19e-01 | 100.0% | 51.1% |
| 3913655 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.76 | 65.0 | 5.33e-01 | 100.0% | 52.5% |
| 4945289 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.76 | 64.0 | 5.73e-01 | 100.0% | 68.3% |
| 3945715 | 101.1.1.11 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_6 | 0.76 | 66.0 | 5.42e-01 | 97.6% | 57.3% |
| 5038587 | 101.1.6.12 ↗ | alpha arrays › HTH › HTH › TrpR › HTH_23 | 0.75 | 61.0 | 5.51e-01 | 92.9% | 78.3% |
| 3789627 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.75 | 65.0 | 5.68e-01 | 100.0% | 70.8% |
| 3590732 | 101.1.1.364 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_49 | 0.75 | 59.0 | 5.83e-01 | 95.2% | 86.7% |
| 3587644 | 101.1.1.17 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 | 0.75 | 63.0 | 5.70e-01 | 97.6% | 81.7% |
| 3821461 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.75 | 61.0 | 5.10e-01 | 97.6% | 51.2% |
| 3288492 | 101.1.1.13 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 | 0.75 | 60.0 | 5.96e-01 | 95.2% | 86.7% |
| 3927372 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.74 | 61.0 | 5.00e-01 | 95.2% | 51.2% |
| 5013438 | 101.1.2.881 ↗ | alpha arrays › HTH › HTH › winged helix domain › UPF0175 | 0.74 | 60.0 | 5.46e-01 | 95.2% | 70.0% |
| 4277585 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.74 | 60.0 | 5.64e-01 | 97.6% | 76.4% |
| 5060990 | 2005.1.1.18 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase | 0.74 | 59.0 | 3.58e-01 | 90.5% | 14.7% |
| 4944661 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.74 | 61.0 | 5.67e-01 | 100.0% | 74.5% |
| 3793393 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.73 | 60.0 | 4.96e-01 | 100.0% | 50.0% |
| 4944760 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.73 | 61.0 | 5.52e-01 | 100.0% | 68.3% |
| 3971636 | 101.28.1.0 ↗ | alpha arrays › HTH › helical bundles in FlhC-like proteins › helical bundles in FlhC-like proteins | 0.73 | 58.0 | 5.95e-01 | 90.5% | 97.5% |
| 5046275 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.73 | 60.0 | 5.62e-01 | 97.6% | 74.5% |
| 4659976 | 101.1.1.25 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › DUF433 | 0.73 | 58.0 | 4.15e-01 | 97.6% | 28.7% |
| 4943227 | 101.1.1.63 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 | 0.72 | 56.0 | 5.60e-01 | 100.0% | 88.9% |
| 4461348 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.71 | 52.0 | 4.71e-01 | 81.0% | 56.7% |
| 3793383 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.70 | 56.0 | 5.04e-01 | 97.6% | 66.2% |
| 3502247 | 101.1.1.63 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 | 0.70 | 58.0 | 5.32e-01 | 100.0% | 70.0% |
| 4979523 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.69 | 58.0 | 4.54e-01 | 95.2% | 51.1% |
| 1678738 | 101.1.2.21 ↗ | alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repress | 0.69 | 59.0 | 5.32e-01 | 100.0% | 72.1% |
| 4142269 | 101.1.1.2 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC | 0.69 | 56.0 | 5.22e-01 | 95.2% | 78.2% |
| 4619778 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.68 | 56.0 | 5.72e-01 | 90.5% | 100.0% |
| 4919061 | 101.1.1.14 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Integrase_Zn | 0.68 | 53.0 | 5.29e-01 | 97.6% | 88.6% |
| 4225050 | 101.1.1.2 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC | 0.68 | 54.0 | 5.24e-01 | 95.2% | 84.0% |
| 4953237 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.67 | 56.0 | 5.22e-01 | 100.0% | 78.2% |
| 3985633 | 101.1.1.13 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 | 0.64 | 51.0 | 4.85e-01 | 100.0% | 76.4% |
| 3945103 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.60 | 48.0 | 4.54e-01 | 97.6% | 94.5% |
| 3920862 | 101.1.1.221 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › CCDC106 | 0.60 | 47.0 | 4.51e-01 | 95.2% | 92.0% |