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MT701592.1__QPB09474.1__CPT_Solomon_016__00015
Bact-VirMT701592.1__QPB09474.1__CPT_Solomon_016__00015
Identity
- Accession:
- MT701592 ↗
- Kingdom:
- phage
Quality
91.4
mean pLDDT
Taxonomy
TaxID: 2767583
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 15-109
Domain cluster:
rep: OK258140.1__UGL61425.1__X__00051__D11-92
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08748.18 best | Phage_TAC_4 | 65.9 | 5.70e-18 | 95.8% | 88.7% |
D2
medium
residues 1-12_139-210
Domain cluster:
rep: MK095605.1__AZS06255.1__MED16_gp15__00015__D26-94
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08809.17 best | DUF1799 | 50.5 | 2.80e-13 | 84.5% | 78.8% |
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2l2oA00 | 1.10.10.1540 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Costar domain | 0.68 | 47.0 | 4.78e-01 | 73.8% | 95.3% |
| 3ja8601 | 3.30.1640.10 | Alpha Beta › 2-Layer Sandwich › mini-chromosome maintenance (MCM) complex, chain A, domain 1 › mini-chromosome maintenance (MCM) complex, chain A, domain 1 | 0.63 | 50.0 | 4.71e-01 | 86.9% | 87.6% |
| 3b02A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 42.0 | 4.24e-01 | 70.2% | 84.7% |
| 3mk7A00 | 1.20.210.10 | Mainly Alpha › Up-down Bundle › Cytochrome C Oxidase; Chain A › Cytochrome c oxidase-like, subunit I domain | 0.60 | 42.0 | 2.63e-01 | 71.4% | 81.3% |
| 2zy2A02 | 1.10.20.110 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › | 0.59 | 44.0 | 3.75e-01 | 82.1% | 63.3% |
| 7wz5A01 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.58 | 44.0 | 3.67e-01 | 82.1% | 86.8% |
| 2kjwA00 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.57 | 35.0 | 3.36e-01 | 70.2% | 52.1% |
| 2xkoA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 42.0 | 4.13e-01 | 84.5% | 80.9% |
| 3cp5A00 | 1.10.760.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain | 0.54 | 38.0 | 3.44e-01 | 72.6% | 74.1% |
| 1lnwF01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 41.0 | 3.70e-01 | 86.9% | 57.3% |
| 3k4oA00 | 3.40.1160.10 | Alpha Beta › 3-Layer(aba) Sandwich › Carbamate kinase › Acetylglutamate kinase-like | 0.53 | 42.0 | 3.01e-01 | 88.1% | 80.0% |
| 2bgcA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 42.0 | 4.04e-01 | 90.5% | 100.0% |
| 1ni3A03 | 1.10.150.300 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Obg-related GTPase Ych/YyaF, coiled-coil domain | 0.52 | 36.0 | 3.59e-01 | 95.2% | 69.2% |
| 1m2oA04 | 1.20.120.730 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Sec23/Sec24 helical domain | 0.51 | 39.0 | 3.40e-01 | 83.3% | 81.0% |
| 1u5pA01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.50 | 38.0 | 3.52e-01 | 79.8% | 88.0% |
| 2xfvA00 | 3.10.260.30 | Alpha Beta › Roll › Mlu1-box Binding Protein; DNA-binding Domain › | 0.50 | 34.0 | 3.18e-01 | 70.2% | 88.0% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3477131 | 101.1.1.227 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_NOL4_2nd | 0.70 | 55.0 | 5.91e-01 | 89.3% | 100.0% |
| 143797 | 101.1.2.149 ↗ | alpha arrays › HTH › HTH › winged helix domain › Costars | 0.68 | 47.0 | 4.86e-01 | 73.8% | 100.0% |
| 3393722 | 101.1.2.149 ↗ | alpha arrays › HTH › HTH › winged helix domain › Costars | 0.65 | 50.0 | 4.38e-01 | 82.1% | 72.8% |
| 3238992 | 2004.1.1.414 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › GTP_EFTU, MMR_HSR1 | 0.65 | 45.0 | 2.98e-01 | 71.4% | 20.3% |
| 4301644 | 101.19.1.0 ↗ | alpha arrays › HTH › C-terminal subdomain in oxygen-independent coproporphyrinogen III oxidase HemN › C-terminal subdomain in oxygen-independent coproporphyrinogen III oxidase HemN | 0.61 | 38.0 | 3.92e-01 | 89.3% | 65.0% |
| 3007060 | 3003.1.1.1 ↗ | a+b complex topology › N-terminal subdomain in DNA replication initiator (cdc21/cdc54) › N-terminal subdomain in DNA replication initiator (cdc21/cdc54) › N-terminal subdomain in DNA replication initiator (cdc21/cdc54) › MCM_N | 0.60 | 50.0 | 4.45e-01 | 92.9% | 78.0% |
| 3592142 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.58 | 40.0 | 3.16e-01 | 73.8% | 68.1% |
| 3929630 | 4323.1.1.1 ↗ | alpha bundles › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › V_ATPase_I | 0.57 | 36.0 | 2.91e-01 | 97.6% | 34.8% |
| None | — | 0.56 | 42.0 | 4.28e-01 | 83.3% | 89.4% | |
| 3592824 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.54 | 38.0 | 3.89e-01 | 72.6% | 97.5% |
| 3622196 | 604.1.1.63 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin_SESTD1 | 0.51 | 35.0 | 3.12e-01 | 70.2% | 86.7% |
| 3724351 | 6155.1.1.2 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › PQ-loop | 0.51 | 39.0 | 3.37e-01 | 79.8% | 80.0% |
| 4939710 | 7523.1.1.27 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › NMT1_2 | 0.51 | 38.0 | 2.91e-01 | 81.0% | 57.1% |
| 3683169 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.51 | 36.0 | 3.50e-01 | 90.5% | 65.0% |
| 139679 | 101.1.9.21 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › Swi6_N | 0.50 | 34.0 | 3.18e-01 | 70.2% | 88.0% |