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MT701593.1__QPB09585.1__CPT_Sycamore_045__00045
Bact-VirMT701593.1__QPB09585.1__CPT_Sycamore_045__00045
Identity
- Accession:
- MT701593 ↗
- Kingdom:
- phage
Quality
91.7
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Colingsworthviridae›
Sycamorevirus›
Streptomyces_phage_Sycamore
TaxID: 2767589
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-119
Domain cluster:
rep: MH651189.1__AXQ65184.1__SEA_SCHMIDT_64__00064__D5-97
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2digA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 37.0 | 4.66e-01 | 71.8% | 95.6% |
| 2qi2A01 | 2.30.30.870 | Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A | 0.63 | 48.0 | 5.04e-01 | 91.5% | 89.4% |
| 2jngA00 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 40.0 | 4.76e-01 | 77.8% | 97.4% |
| 4qqgG00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 39.0 | 4.74e-01 | 82.9% | 100.0% |
| 3obyA01 | 2.30.30.870 | Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A | 0.62 | 47.0 | 4.86e-01 | 92.3% | 85.3% |
| 1txdA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.60 | 44.0 | 4.42e-01 | 76.9% | 95.0% |
| 2oviA00 | 3.40.1570.10 | Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains | 0.59 | 49.0 | 4.43e-01 | 88.9% | 83.5% |
| 3agjF01 | 2.30.30.870 | Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A | 0.58 | 50.0 | 4.93e-01 | 94.9% | 90.6% |
| 5exvC00 | 3.40.1570.10 | Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains | 0.58 | 46.0 | 4.10e-01 | 84.6% | 74.5% |
| 3i4tA02 | 3.30.950.10 | Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain | 0.58 | 39.0 | 3.67e-01 | 77.8% | 56.2% |
| 3cpfA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 33.0 | 4.08e-01 | 76.1% | 100.0% |
| 1wgsA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 39.0 | 3.76e-01 | 73.5% | 62.4% |
| 7xpkA01 | 2.30.30.490 | Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain | 0.54 | 40.0 | 3.77e-01 | 78.6% | 74.5% |
| 4jrnA02 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.53 | 38.0 | 3.65e-01 | 76.1% | 88.7% |
| 4qwoB00 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.52 | 29.0 | 2.81e-01 | 70.9% | 45.5% |
| 3dluA00 | 3.30.56.30 | Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › Signal recognition particle, SRP19-like subunit | 0.52 | 39.0 | 4.26e-01 | 96.6% | 96.8% |
| 4a0tA03 | 2.60.320.30 | Mainly Beta › Sandwich › mini-chromosome maintenance (MCM) complex, domain 2 › | 0.51 | 35.0 | 3.98e-01 | 79.5% | 92.2% |
ECOD (52)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4034320 | 4.1.1.398 ↗ | beta barrels › SH3 › SH3 › SH3 › YolD | 0.77 | 45.0 | 5.82e-01 | 75.2% | 100.0% |
| 5015352 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.75 | 45.0 | 5.24e-01 | 80.3% | 84.3% |
| 4545520 | 4.7.1.7 ↗ | beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › WYL | 0.74 | 45.0 | 5.25e-01 | 76.9% | 84.7% |
| 3279470 | 4.31.1.1 ↗ | beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL | 0.74 | 43.0 | 4.88e-01 | 76.1% | 75.6% |
| 4120629 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.73 | 46.0 | 5.63e-01 | 78.6% | 98.7% |
| 3953109 | 4.31.1.1 ↗ | beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL | 0.73 | 46.0 | 5.07e-01 | 76.1% | 77.9% |
| 3942912 | 4.1.1.323 ↗ | beta barrels › SH3 › SH3 › SH3 › WYL | 0.72 | 45.0 | 5.14e-01 | 74.4% | 84.7% |
| 3699995 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 43.0 | 5.38e-01 | 81.2% | 100.0% |
| 4124092 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 42.0 | 5.24e-01 | 79.5% | 98.6% |
| 3280641 | 4.31.1.1 ↗ | beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL | 0.70 | 44.0 | 4.79e-01 | 76.1% | 75.0% |
| 3409587 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.69 | 39.0 | 4.38e-01 | 77.8% | 71.1% |
| 4976092 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.69 | 49.0 | 5.53e-01 | 82.9% | 95.6% |
| 4069543 | 4.8.1.6 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot | 0.68 | 42.0 | 5.05e-01 | 83.8% | 94.7% |
| 1394554 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.68 | 38.0 | 4.94e-01 | 70.9% | 100.0% |
| 5032809 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.68 | 42.0 | 4.09e-01 | 78.6% | 55.4% |
| 5069062 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.68 | 35.0 | 4.77e-01 | 75.2% | 100.0% |
| 3740208 | 4.8.1.6 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot | 0.67 | 38.0 | 4.91e-01 | 78.6% | 100.0% |
| 4937389 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.67 | 41.0 | 4.21e-01 | 78.6% | 63.6% |
| 5038570 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.67 | 42.0 | 4.25e-01 | 78.6% | 61.7% |
| 5058103 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 37.0 | 4.76e-01 | 77.8% | 94.1% |
| 3766659 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.66 | 35.0 | 4.62e-01 | 76.1% | 100.0% |
| 3281618 | 4.31.1.1 ↗ | beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL | 0.66 | 45.0 | 4.83e-01 | 76.1% | 82.0% |
| 3926175 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 38.0 | 4.45e-01 | 75.2% | 80.0% |
| 3511375 | 4.1.1.349 ↗ | beta barrels › SH3 › SH3 › SH3 › ROF | 0.65 | 42.0 | 4.80e-01 | 72.6% | 89.4% |
| 3519774 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 37.0 | 3.94e-01 | 77.8% | 62.9% |
| 3714156 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 41.0 | 4.77e-01 | 70.1% | 89.4% |
| 3409460 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 45.0 | 4.69e-01 | 79.5% | 80.0% |
| 4956630 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.64 | 42.0 | 3.79e-01 | 80.3% | 49.7% |
| 3251940 | 4.1.1.51 ↗ | beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor | 0.64 | 38.0 | 4.58e-01 | 74.4% | 92.0% |
| 608 | 4.23.1.2 ↗ | beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 | 0.63 | 48.0 | 5.04e-01 | 91.5% | 89.4% |
| 3730229 | 4.1.1.102 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_3 | 0.62 | 36.0 | 4.38e-01 | 74.4% | 89.3% |
| 3713334 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.62 | 33.0 | 4.38e-01 | 70.1% | 100.0% |
| 3706223 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 38.0 | 4.00e-01 | 75.2% | 68.6% |
| 4565130 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 39.0 | 4.28e-01 | 79.5% | 78.9% |
| 4931113 | 4.23.1.2 ↗ | beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 | 0.61 | 48.0 | 4.91e-01 | 91.5% | 88.2% |
| 3790897 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 39.0 | 4.18e-01 | 77.8% | 75.0% |
| 3656401 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 39.0 | 4.66e-01 | 79.5% | 100.0% |
| 3246086 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 38.0 | 4.15e-01 | 79.5% | 77.9% |
| 3715285 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.60 | 39.0 | 3.58e-01 | 78.6% | 49.7% |
| 3622139 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.59 | 35.0 | 3.96e-01 | 76.9% | 76.7% |
| 3615426 | 4.11.1.1 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 | 0.58 | 39.0 | 3.58e-01 | 78.6% | 52.7% |
| 3920026 | 4.1.1.101 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_2 | 0.58 | 35.0 | 2.93e-01 | 77.8% | 32.9% |
| 3607882 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.57 | 41.0 | 4.29e-01 | 74.4% | 98.2% |
| 3591144 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.56 | 40.0 | 3.69e-01 | 73.5% | 68.7% |
| 3608562 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 40.0 | 3.61e-01 | 74.4% | 64.8% |
| 3416068 | 4.1.1.187 ↗ | beta barrels › SH3 › SH3 › SH3 › DIRP | 0.54 | 47.0 | 4.29e-01 | 95.7% | 81.9% |
| 4417145 | 1.1.5.26 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZN | 0.53 | 36.0 | 3.66e-01 | 75.2% | 69.6% |
| 3740221 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.52 | 39.0 | 3.52e-01 | 78.6% | 61.3% |
| 3482360 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 37.0 | 4.19e-01 | 76.1% | 96.7% |
| 4267752 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.51 | 38.0 | 4.10e-01 | 86.3% | 96.8% |
| 4087903 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.51 | 37.0 | 4.12e-01 | 82.9% | 98.9% |
| 4452870 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.51 | 37.0 | 4.14e-01 | 82.9% | 100.0% |