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MT701593.1__QPB09602.1__CPT_Sycamore_068__00062
Bact-VirMT701593.1__QPB09602.1__CPT_Sycamore_068__00062
Identity
- Accession:
- MT701593 ↗
- Kingdom:
- phage
Quality
92.2
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Colingsworthviridae›
Sycamorevirus›
Streptomyces_phage_Sycamore
TaxID: 2767589
Cluster
View cluster (7 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-135
Domain cluster:
rep: PH2015_22_scaffold_0_prodigal-single.1__X__X__00160__D748-882
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3bxoA02 | 2.20.130.10 | Mainly Beta › Single Sheet › S-adenosyl-L-methionine-dependent methyltransferases › CAC2371-like domains | 0.72 | 29.0 | 4.36e-01 | 100.0% | 86.4% |
| 2cwrA00 | 2.60.40.290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.72 | 42.0 | 4.90e-01 | 92.5% | 80.4% |
| 1h7zA00 | 2.60.90.10 | Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › Adenovirus pIV-related, attachment domain | 0.65 | 60.0 | 5.26e-01 | 100.0% | 95.8% |
| 4aw7A01 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.64 | 43.0 | 4.51e-01 | 100.0% | 75.4% |
| 2xskA00 | 2.60.40.2420 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.64 | 41.0 | 4.69e-01 | 98.5% | 89.5% |
| 8owfA01 | 2.60.40.290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.64 | 44.0 | 4.79e-01 | 95.5% | 84.7% |
| 3bp6B02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.64 | 32.0 | 3.80e-01 | 91.0% | 70.5% |
| 1rc6A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.62 | 46.0 | 3.76e-01 | 100.0% | 42.6% |
| 1s3rA02 | 3.30.1040.20 | Alpha Beta › 2-Layer Sandwich › Carboxypeptidase Inhibitor; Chain A › | 0.60 | 23.0 | 3.56e-01 | 90.2% | 86.8% |
| 2gr7A00 | 3.30.1300.30 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like | 0.60 | 27.0 | 3.01e-01 | 100.0% | 50.5% |
| 2n59A00 | 2.60.40.2420 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.60 | 39.0 | 4.31e-01 | 80.5% | 85.1% |
| 3isyA00 | 2.60.40.2360 | Mainly Beta › Sandwich › Immunoglobulin-like › Intracellular proteinase inhibitor BsuPI | 0.59 | 37.0 | 3.93e-01 | 91.0% | 70.9% |
| 2p5zX01 | 2.30.110.50 | Mainly Beta › Roll › Pnp Oxidase; Chain A › | 0.58 | 37.0 | 3.44e-01 | 97.7% | 51.2% |
| 3wnoA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 37.0 | 4.16e-01 | 99.2% | 87.0% |
| 2xnjA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.55 | 40.0 | 4.38e-01 | 98.5% | 95.2% |
| 6a2bA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 34.0 | 3.94e-01 | 98.5% | 89.9% |
| 1cqxA02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.55 | 42.0 | 4.51e-01 | 85.0% | 96.4% |
| 4awdB00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 49.0 | 3.81e-01 | 100.0% | 86.3% |
| 3njtA01 | 2.40.160.50 | Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family | 0.54 | 42.0 | 3.20e-01 | 81.2% | 47.0% |
| 4d6gA03 | 2.60.220.10 | Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal | 0.53 | 41.0 | 4.23e-01 | 100.0% | 86.2% |
| 7a0hA02 | 3.90.1150.210 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit | 0.52 | 42.0 | 3.86e-01 | 85.7% | 85.6% |
| 2wliA02 | 2.60.40.1400 | Mainly Beta › Sandwich › Immunoglobulin-like › G protein-activated inward rectifier potassium channel 1 | 0.52 | 40.0 | 3.80e-01 | 83.5% | 67.7% |
| 7vu0A01 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.51 | 44.0 | 3.10e-01 | 94.7% | 45.2% |
ECOD (43)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3164980 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.82 | 73.0 | 7.49e-01 | 100.0% | 96.9% |
| 3714801 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.68 | 43.0 | 4.58e-01 | 100.0% | 70.8% |
| 3290942 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.68 | 39.0 | 4.41e-01 | 100.0% | 72.4% |
| 3186682 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.68 | 46.0 | 4.40e-01 | 98.5% | 59.4% |
| 3989856 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.67 | 51.0 | 5.10e-01 | 100.0% | 77.1% |
| 4025754 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.67 | 38.0 | 4.02e-01 | 91.7% | 61.7% |
| 3609473 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.66 | 44.0 | 4.17e-01 | 100.0% | 57.4% |
| 4966673 | 11.1.1.51 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › LEA_2 | 0.65 | 37.0 | 4.09e-01 | 90.2% | 69.5% |
| 5048998 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.64 | 42.0 | 4.38e-01 | 91.7% | 70.4% |
| 5005735 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.64 | 36.0 | 4.32e-01 | 92.5% | 82.2% |
| 4991105 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.63 | 56.0 | 4.94e-01 | 95.5% | 85.3% |
| 5000149 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.62 | 36.0 | 3.73e-01 | 94.0% | 60.0% |
| 4567712 | 10.32.1.48 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_26 | 0.61 | 48.0 | 4.92e-01 | 95.5% | 87.2% |
| 5021670 | 11.1.1.1422 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7406 | 0.60 | 35.0 | 3.48e-01 | 97.7% | 53.6% |
| 3258692 | 11.10.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like | 0.59 | 48.0 | 4.71e-01 | 94.0% | 80.6% |
| 4932771 | 11.1.1.1128 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF27408 | 0.59 | 51.0 | 4.89e-01 | 100.0% | 82.7% |
| 3817396 | 11.1.1.668 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TRAPPC13_M | 0.59 | 39.0 | 3.83e-01 | 91.0% | 62.1% |
| 4954978 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 42.0 | 4.33e-01 | 92.5% | 79.2% |
| 3260833 | 11.10.1.5 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH_2 | 0.58 | 46.0 | 4.48e-01 | 93.2% | 77.9% |
| 3213538 | 11.10.1.6 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH | 0.57 | 45.0 | 4.57e-01 | 93.2% | 86.2% |
| 3973694 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 35.0 | 4.09e-01 | 83.5% | 90.0% |
| 4963491 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 36.0 | 4.08e-01 | 83.5% | 87.4% |
| 4955985 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.57 | 49.0 | 4.34e-01 | 94.7% | 83.1% |
| 5047423 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 39.0 | 4.15e-01 | 100.0% | 82.6% |
| 5032094 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 39.0 | 4.33e-01 | 97.7% | 92.4% |
| 3213551 | 11.10.1.6 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH | 0.56 | 44.0 | 4.52e-01 | 93.2% | 90.4% |
| 3716614 | 11.1.1.67 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF525 | 0.55 | 41.0 | 4.27e-01 | 88.7% | 83.2% |
| 5018601 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 36.0 | 4.04e-01 | 82.7% | 87.0% |
| 3834568 | 11.10.1.5 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH_2 | 0.55 | 46.0 | 4.68e-01 | 97.7% | 94.6% |
| 3598070 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 39.0 | 4.12e-01 | 95.5% | 83.3% |
| 3243813 | 11.10.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like | 0.54 | 40.0 | 4.21e-01 | 91.0% | 87.5% |
| 5025699 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 35.0 | 3.86e-01 | 98.5% | 85.0% |
| 142515 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.54 | 39.0 | 4.32e-01 | 78.9% | 95.3% |
| 3794791 | 11.10.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like | 0.53 | 47.0 | 4.38e-01 | 97.7% | 83.0% |
| 3278857 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.53 | 38.0 | 3.51e-01 | 92.5% | 58.2% |
| 3863736 | 11.10.1.5 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH_2 | 0.53 | 46.0 | 4.23e-01 | 97.7% | 74.4% |
| 3485746 | 12.2.1.8 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Hyaluronate lyase-like, C-terminal domain › Hyaluronate lyase-like, C-terminal domain › UPF0556 | 0.52 | 46.0 | 4.65e-01 | 100.0% | 98.5% |
| 3250889 | 11.1.1.44 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Alpha_adaptinC2 | 0.52 | 38.0 | 4.02e-01 | 95.5% | 87.0% |
| 4172772 | 10.32.1.167 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Agarase_CBM | 0.52 | 44.0 | 4.00e-01 | 94.7% | 86.8% |
| 3056279 | 4051.1.1.2 ↗ | a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F-actin_cap_A | 0.51 | 41.0 | 3.87e-01 | 85.7% | 73.6% |
| 3614080 | 11.10.1.5 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH_2 | 0.51 | 45.0 | 4.31e-01 | 99.2% | 91.9% |
| 5051178 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 43.0 | 3.48e-01 | 94.7% | 93.2% |
| 3392834 | 11.1.1.44 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Alpha_adaptinC2 | 0.50 | 36.0 | 3.89e-01 | 97.7% | 90.0% |