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MT701595.1__QPB09710.1__CPT_Shaeky_023__00023
Bact-VirMT701595.1__QPB09710.1__CPT_Shaeky_023__00023
Identity
- Accession:
- MT701595 ↗
- Kingdom:
- phage
Quality
85.2
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Colingsworthviridae›
Shaekyvirus›
Streptomyces_phage_Shaeky
TaxID: 2767586
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-60
Domain cluster:
representative
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3a1sA02 | 1.10.287.1770 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.69 | 45.0 | 3.79e-01 | 96.2% | 39.8% |
| 1kvdA00 | 4.10.420.10 | Few Secondary Structures › Irregular › Smk Toxin, alpha chain › Smk Toxin, alpha chain | 0.67 | 41.0 | 3.84e-01 | 100.0% | 50.8% |
| 3dpuA03 | 1.10.10.2200 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.64 | 40.0 | 3.55e-01 | 100.0% | 42.7% |
| 2oviA00 | 3.40.1570.10 | Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains | 0.62 | 44.0 | 3.22e-01 | 78.8% | 94.3% |
| 3fnrA02 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.62 | 53.0 | 3.32e-01 | 100.0% | 53.0% |
| 4apyA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.60 | 50.0 | 3.00e-01 | 100.0% | 12.3% |
| 6aikB00 | 3.40.50.10300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › CoaB-like | 0.60 | 52.0 | 3.27e-01 | 100.0% | 88.0% |
| 1e2jA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.60 | 47.0 | 3.05e-01 | 96.2% | 17.3% |
| 1p72A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.58 | 48.0 | 2.96e-01 | 94.2% | 22.0% |
| 1s2gB00 | 3.40.50.450 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.58 | 40.0 | 2.81e-01 | 71.2% | 38.9% |
| 1osnC00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.56 | 43.0 | 2.81e-01 | 96.2% | 22.7% |
| 3u7rA00 | 3.40.50.360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain | 0.55 | 45.0 | 3.19e-01 | 98.1% | 85.2% |
| 3l0qA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.55 | 44.0 | 2.75e-01 | 96.2% | 92.6% |
| 1mg7A02 | 3.30.230.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › | 0.53 | 41.0 | 3.01e-01 | 88.5% | 32.5% |
| 3kksB00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.53 | 44.0 | 3.17e-01 | 96.2% | 31.6% |
| 7r7eA01 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.53 | 42.0 | 3.39e-01 | 96.2% | 92.4% |
ECOD (21)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5079244 | 101.1.2.77 ↗ | alpha arrays › HTH › HTH › winged helix domain › ESCRT-II | 0.65 | 43.0 | 3.52e-01 | 98.1% | 37.9% |
| 4648953 | 3860.1.1.130 ↗ | alpha bundles › Myosin VI lever arm › Myosin VI lever arm › Myosin VI lever arm › Yae1_N | 0.64 | 48.0 | 3.68e-01 | 80.8% | 66.1% |
| 3781412 | 327.5.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins | 0.63 | 52.0 | 3.91e-01 | 98.1% | 97.9% |
| 3951460 | 101.30.1.3 ↗ | alpha arrays › HTH › Rv2175c › Rv2175c › Rv2175c_wHTH | 0.63 | 44.0 | 3.80e-01 | 76.9% | 58.9% |
| 4028993 | 101.1.2.392 ↗ | alpha arrays › HTH › HTH › winged helix domain › SNRNP200_wHTH | 0.63 | 51.0 | 3.91e-01 | 88.5% | 41.7% |
| 1322887 | 2004.1.1.52 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Herpes_TK | 0.60 | 47.0 | 3.04e-01 | 96.2% | 17.3% |
| 3852624 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.59 | 40.0 | 2.59e-01 | 73.1% | 32.1% |
| 3951173 | 206.1.3.27 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › CP_ATPgrasp_2 | 0.59 | 41.0 | 2.45e-01 | 98.1% | 10.0% |
| 3593400 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.58 | 49.0 | 3.08e-01 | 98.1% | 18.0% |
| 4672000 | 589.1.1.0 ↗ | alpha arrays › Triger factor/SurA peptide-binding domain-like › Triger factor/SurA peptide-binding domain-like › Porin chaperone SurA, peptide-binding domain | 0.57 | 45.0 | 3.13e-01 | 86.5% | 63.4% |
| 3489318 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.57 | 48.0 | 3.82e-01 | 100.0% | 44.3% |
| 4015398 | 4028.1.1.1 ↗ | beta barrels › Barrel domain in heme-dependent catalases › Barrel domain in heme-dependent catalases › Barrel domain in heme-dependent catalases › Catalase | 0.56 | 40.0 | 2.41e-01 | 78.8% | 62.5% |
| 4988633 | 5038.1.1.0 ↗ | alpha superhelices › Cytochrome c oxidase subunit I-like › Cytochrome c oxidase subunit I-like › Cytochrome c oxidase subunit I-like | 0.56 | 44.0 | 2.74e-01 | 94.2% | 96.1% |
| 3854028 | 207.1.1.126 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › PRAME_C | 0.56 | 38.0 | 2.42e-01 | 73.1% | 37.1% |
| 1684828 | 243.1.1.67 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › Cds6_C | 0.56 | 46.0 | 3.50e-01 | 94.2% | 85.0% |
| 3339142 | 327.5.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C | 0.54 | 44.0 | 3.38e-01 | 98.1% | 96.4% |
| 3936781 | 101.26.1.2 ↗ | alpha arrays › HTH › Tex N-terminal domain › Tex N-terminal domain › HTH_44 | 0.53 | 41.0 | 3.22e-01 | 100.0% | 36.3% |
| 5066333 | 2004.1.1.196 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_22 | 0.52 | 43.0 | 2.80e-01 | 92.3% | 23.7% |
| 3965357 | 2007.2.1.3 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Flavoproteins › FMN_red | 0.52 | 44.0 | 3.18e-01 | 96.2% | 96.8% |
| 3965844 | 589.1.1.2 ↗ | alpha arrays › Triger factor/SurA peptide-binding domain-like › Triger factor/SurA peptide-binding domain-like › Porin chaperone SurA, peptide-binding domain › SurA_N_3 | 0.51 | 43.0 | 3.12e-01 | 100.0% | 33.1% |
| 4578066 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.50 | 41.0 | 2.84e-01 | 100.0% | 94.0% |